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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G12330 |
| fragaria_vesca | FvH4_5g00760 |
| malus_domestica | MD04G1079100.v1.1 |
| prunus_persica | Prupe.5G080100_v2.0.a1 |
| pyrus_communis | pycom04g07090 |
| rosa_chinensis | RchiOBHm_Chr7g0201471 |
| rosa_laevigata | RLG00000003675 |
| rosa_roxburghii | Rroxscaffold_3G00255290 |
| rosa_rugosa | Rorug07G0063700 |
| rosa_samantha | Rh7AG190600 Rh7BG192800 Rh7CG201900 Rh7DG195400 |
| rosa_wichuraiana | Rw7G016720 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1137 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 69 |
| AciI | CCGC | 2 cut(s) | 163, 820 |
| AclWI | GGATC | 8 cut(s) | 6, 19, 332, 630, 1428, 1705, 1725, 1824 |
| AcsI | RAATTY | 3 cut(s) | 284, 898, 1402 |
| AcuI | CTGAAG | 2 cut(s) | 1173, 1391 |
| AfaI | GTAC | 4 cut(s) | 105, 585, 1757, 1826 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 69, 2008 |
| AflII | CTTAAG | 2 cut(s) | 239, 1505 |
| Alw21I | GWGCWC | 6 cut(s) | 182, 709, 990, 1236, 1442, 1597 |
| Alw26I | GTCTC | 6 cut(s) | 15, 48, 64, 1206, 1547, 1955 |
| Alw44I | GTGCAC | 1 cut(s) | 705 |
| AlwI | GGATC | 8 cut(s) | 6, 19, 332, 630, 1428, 1705, 1725, 1824 |
| AoxI | GGCC | 1 cut(s) | 1073 |
| ApaLI | GTGCAC | 1 cut(s) | 705 |
| ApeKI | GCWGC | 1 cut(s) | 1793 |
| ApoI | RAATTY | 3 cut(s) | 284, 898, 1402 |
| AseI | ATTAAT | 1 cut(s) | 1343 |
| AspLEI | GCGC | 1 cut(s) | 495 |
| AspS9I | GGNCC | 2 cut(s) | 592, 822 |
| AsuHPI | GGTGA | 3 cut(s) | 195, 1123, 1936 |
| AvaII | GGWCC | 2 cut(s) | 592, 822 |
| BaeGI | GKGCMC | 2 cut(s) | 709, 1543 |
| BamHI | GGATCC | 1 cut(s) | 11 |
| BanII | GRGCYC | 2 cut(s) | 778, 1597 |
| BbsI | GAAGAC | 1 cut(s) | 487 |
| Bbv12I | GWGCWC | 6 cut(s) | 182, 709, 990, 1236, 1442, 1597 |
| BbvI | GCAGC | 1 cut(s) | 1805 |
| BccI | CCATC | 4 cut(s) | 511, 751, 796, 1289 |
| BceAI | ACGGC | 1 cut(s) | 800 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1782, 1816 |
| BcoDI | GTCTC | 6 cut(s) | 15, 48, 64, 1206, 1547, 1955 |
| BfaI | CTAG | 5 cut(s) | 183, 392, 1434, 1692, 2041 |
| BfmI | CTRYAG | 1 cut(s) | 1669 |
| BfrI | CTTAAG | 2 cut(s) | 239, 1505 |
| BglII | AGATCT | 2 cut(s) | 373, 1764 |
| BisI | GCNGC | 1 cut(s) | 1794 |
| BlpI | GCTNAGC | 1 cut(s) | 366 |
| BlsI | GCNGC | 1 cut(s) | 1795 |
| BmcAI | AGTACT | 1 cut(s) | 585 |
| Bme18I | GGWCC | 2 cut(s) | 592, 822 |
| BmgT120I | GGNCC | 2 cut(s) | 592, 822 |
| BmiI | GGNNCC | 2 cut(s) | 13, 333 |
| BmrI | ACTGGG | 1 cut(s) | 1426 |
| BmsI | GCATC | 1 cut(s) | 897 |
| BmuI | ACTGGG | 1 cut(s) | 1426 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1671 |
| BpiI | GAAGAC | 1 cut(s) | 487 |
| BpmI | CTGGAG | 1 cut(s) | 318 |
| Bpu10I | CCTNAGC | 1 cut(s) | 122 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 366 |
| BpuEI | CTTGAG | 6 cut(s) | 446, 608, 818, 914, 1064, 1567 |
| Bsa29I | ATCGAT | 1 cut(s) | 1531 |
| BsaBI | GATNNNNATC | 1 cut(s) | 342 |
| BsaJI | CCNNGG | 2 cut(s) | 1386, 1737 |
| BsaWI | WCCGGW | 1 cut(s) | 205 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 69, 2008 |
| Bse1I | ACTGG | 5 cut(s) | 111, 1092, 1421, 1614, 1941 |
| Bse3DI | GCAATG | 1 cut(s) | 1990 |
| Bse8I | GATNNNNATC | 1 cut(s) | 342 |
| BseCI | ATCGAT | 1 cut(s) | 1531 |
| BseDI | CCNNGG | 2 cut(s) | 1386, 1737 |
| BseGI | GGATG | 5 cut(s) | 115, 766, 888, 1366, 1747 |
| BseJI | GATNNNNATC | 1 cut(s) | 342 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 69, 2008 |
| BseMI | GCAATG | 1 cut(s) | 1990 |
| BseNI | ACTGG | 5 cut(s) | 111, 1092, 1421, 1614, 1941 |
| BseRI | GAGGAG | 6 cut(s) | 25, 28, 443, 998, 1061, 1726 |
| BseSI | GKGCMC | 2 cut(s) | 709, 1543 |
| BseXI | GCAGC | 1 cut(s) | 1805 |
| BshFI | GGCC | 1 cut(s) | 1075 |
| BshVI | ATCGAT | 1 cut(s) | 1531 |
| BsiHKAI | GWGCWC | 6 cut(s) | 182, 709, 990, 1236, 1442, 1597 |
| BsiSI | CCGG | 1 cut(s) | 206 |
| BslFI | GGGAC | 3 cut(s) | 825, 1859, 2024 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 69, 2008 |
| BsmAI | GTCTC | 6 cut(s) | 15, 48, 64, 1206, 1547, 1955 |
| BsmBI | CGTCTC | 2 cut(s) | 48, 64 |
| BsmFI | GGGAC | 3 cut(s) | 825, 1859, 2024 |
| BsmI | GAATGC | 3 cut(s) | 301, 1462, 1796 |
| BsnI | GGCC | 1 cut(s) | 1075 |
| Bsp1286I | GDGCHC | 8 cut(s) | 182, 709, 778, 990, 1236, 1442, 1543, 1597 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 366 |
| BspACI | CCGC | 2 cut(s) | 163, 820 |
| BspANI | GGCC | 1 cut(s) | 1075 |
| BspDI | ATCGAT | 1 cut(s) | 1531 |
| BspLI | GGNNCC | 2 cut(s) | 13, 333 |
| BspPI | GGATC | 8 cut(s) | 6, 19, 332, 630, 1428, 1705, 1725, 1824 |
| BspQI | GCTCTTC | 1 cut(s) | 483 |
| BspTI | CTTAAG | 2 cut(s) | 239, 1505 |
| BsrDI | GCAATG | 1 cut(s) | 1990 |
| BsrI | ACTGG | 5 cut(s) | 111, 1092, 1421, 1614, 1941 |
| BssECI | CCNNGG | 2 cut(s) | 1386, 1737 |
| BssT1I | CCWWGG | 1 cut(s) | 1386 |
| Bst4CI | ACNGT | 6 cut(s) | 500, 647, 834, 1575, 1673, 2036 |
| Bst6I | CTCTTC | 6 cut(s) | 230, 483, 564, 714, 1176, 1209 |
| BstAFI | CTTAAG | 2 cut(s) | 239, 1505 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 616 |
| BstC8I | GCNNGC | 6 cut(s) | 171, 468, 678, 1125, 1543, 1710 |
| BstEII | GGTNACC | 1 cut(s) | 245 |
| BstF5I | GGATG | 5 cut(s) | 115, 766, 888, 1366, 1747 |
| BstHHI | GCGC | 1 cut(s) | 495 |
| BstMAI | GTCTC | 6 cut(s) | 15, 48, 64, 1206, 1547, 1955 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 362, 616 |
| BstNSI | RCATGY | 1 cut(s) | 1475 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1671 |
| BstPI | GGTNACC | 1 cut(s) | 245 |
| BstSFI | CTRYAG | 1 cut(s) | 1669 |
| BstSLI | GKGCMC | 2 cut(s) | 709, 1543 |
| BstV1I | GCAGC | 1 cut(s) | 1805 |
| BstV2I | GAAGAC | 1 cut(s) | 487 |
| BstX2I | RGATCY | 6 cut(s) | 11, 337, 373, 1420, 1717, 1764 |
| BstYI | RGATCY | 6 cut(s) | 11, 337, 373, 1420, 1717, 1764 |
| Bsu15I | ATCGAT | 1 cut(s) | 1531 |
| BsuRI | GGCC | 1 cut(s) | 1075 |
| BsuTUI | ATCGAT | 1 cut(s) | 1531 |
| BtsCI | GGATG | 5 cut(s) | 115, 766, 888, 1366, 1747 |
| BtsI | GCAGTG | 3 cut(s) | 1016, 1134, 1870 |
| BtsIMutI | CAGTG | 4 cut(s) | 652, 1016, 1134, 1870 |
| Cac8I | GCNNGC | 6 cut(s) | 171, 468, 678, 1125, 1543, 1710 |
| CfoI | GCGC | 1 cut(s) | 495 |
| Cfr13I | GGNCC | 2 cut(s) | 592, 822 |
| ClaI | ATCGAT | 1 cut(s) | 1531 |
| Csp6I | GTAC | 4 cut(s) | 104, 584, 1756, 1825 |
| CviAII | CATG | 4 cut(s) | 671, 940, 991, 1472 |
| CviQI | GTAC | 4 cut(s) | 104, 584, 1756, 1825 |
| Eam1104I | CTCTTC | 6 cut(s) | 230, 483, 564, 714, 1176, 1209 |
| EarI | CTCTTC | 6 cut(s) | 230, 483, 564, 714, 1176, 1209 |
| EciI | GGCGGA | 1 cut(s) | 178 |
| Ecl136II | GAGCTC | 1 cut(s) | 1595 |
| Eco130I | CCWWGG | 1 cut(s) | 1386 |
| Eco24I | GRGCYC | 2 cut(s) | 778, 1597 |
| Eco32I | GATATC | 1 cut(s) | 1999 |
| Eco47I | GGWCC | 2 cut(s) | 592, 822 |
| Eco53kI | GAGCTC | 1 cut(s) | 1595 |
| Eco57I | CTGAAG | 2 cut(s) | 1173, 1391 |
| Eco91I | GGTNACC | 1 cut(s) | 245 |
| EcoICRI | GAGCTC | 1 cut(s) | 1595 |
| EcoO109I | RGGNCCY | 1 cut(s) | 592 |
| EcoO65I | GGTNACC | 1 cut(s) | 245 |
| EcoRI | GAATTC | 1 cut(s) | 898 |
| EcoRV | GATATC | 1 cut(s) | 1999 |
| EcoT14I | CCWWGG | 1 cut(s) | 1386 |
| EcoT38I | GRGCYC | 2 cut(s) | 778, 1597 |
| ErhI | CCWWGG | 1 cut(s) | 1386 |
| Esp3I | CGTCTC | 2 cut(s) | 48, 64 |
| FaeI | CATG | 4 cut(s) | 674, 943, 994, 1475 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 408, 440, 1026, 1058 |
| FaqI | GGGAC | 3 cut(s) | 825, 1859, 2024 |
| FatI | CATG | 4 cut(s) | 670, 939, 990, 1471 |
| Fnu4HI | GCNGC | 1 cut(s) | 1794 |
| FokI | GGATG | 5 cut(s) | 122, 773, 875, 1373, 1754 |
| FriOI | GRGCYC | 2 cut(s) | 778, 1597 |
| Fsp4HI | GCNGC | 1 cut(s) | 1794 |
| FspBI | CTAG | 5 cut(s) | 183, 392, 1434, 1692, 2041 |
| GlaI | GCGC | 1 cut(s) | 494 |
| GluI | GCNGC | 1 cut(s) | 1794 |
| GsuI | CTGGAG | 1 cut(s) | 318 |
| HaeIII | GGCC | 1 cut(s) | 1075 |
| HapII | CCGG | 1 cut(s) | 206 |
| HhaI | GCGC | 1 cut(s) | 495 |
| Hin1II | CATG | 4 cut(s) | 674, 943, 994, 1475 |
| Hin6I | GCGC | 1 cut(s) | 493 |
| HinP1I | GCGC | 1 cut(s) | 493 |
| HindIII | AAGCTT | 4 cut(s) | 167, 198, 320, 1035 |
| HpaII | CCGG | 1 cut(s) | 206 |
| HphI | GGTGA | 3 cut(s) | 195, 1123, 1936 |
| Hpy166II | GTNNAC | 4 cut(s) | 104, 707, 1868, 1944 |
| Hpy8I | GTNNAC | 4 cut(s) | 104, 707, 1868, 1944 |
| Hpy99I | CGWCG | 1 cut(s) | 59 |
| HpyAV | CCTTC | 8 cut(s) | 85, 718, 802, 1246, 1282, 1315, 1366, 1573 |
| HpyCH4III | ACNGT | 6 cut(s) | 500, 647, 834, 1575, 1673, 2036 |
| HpyCH4IV | ACGT | 1 cut(s) | 1870 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 362, 616 |
| HpySE526I | ACGT | 1 cut(s) | 1870 |
| Hsp92II | CATG | 4 cut(s) | 674, 943, 994, 1475 |
| HspAI | GCGC | 1 cut(s) | 493 |
| LguI | GCTCTTC | 1 cut(s) | 483 |
| LmnI | GCTCC | 6 cut(s) | 337, 985, 1231, 1388, 1437, 1592 |
| Lsp1109I | GCAGC | 1 cut(s) | 1805 |
| LweI | GCATC | 1 cut(s) | 897 |
| MaeI | CTAG | 5 cut(s) | 183, 392, 1434, 1692, 2041 |
| MaeII | ACGT | 1 cut(s) | 1870 |
| MaeIII | GTNAC | 2 cut(s) | 245, 828 |
| MfeI | CAATTG | 4 cut(s) | 360, 689, 1143, 1247 |
| MflI | RGATCY | 6 cut(s) | 11, 337, 373, 1420, 1717, 1764 |
| MhlI | GDGCHC | 8 cut(s) | 182, 709, 778, 990, 1236, 1442, 1543, 1597 |
| MlyI | GAGTC | 1 cut(s) | 1208 |
| MmeI | TCCRAC | 2 cut(s) | 1263, 1335 |
| MseI | TTAA | 9 cut(s) | 240, 306, 378, 531, 905, 1010, 1326, 1343, 1506 |
| MslI | CAYNNNNRTG | 1 cut(s) | 993 |
| MspCI | CTTAAG | 2 cut(s) | 239, 1505 |
| MspI | CCGG | 1 cut(s) | 206 |
| MunI | CAATTG | 4 cut(s) | 360, 689, 1143, 1247 |
| Mva1269I | GAATGC | 3 cut(s) | 301, 1462, 1796 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 362, 616 |
| NlaIII | CATG | 4 cut(s) | 674, 943, 994, 1475 |
| NlaIV | GGNNCC | 2 cut(s) | 13, 333 |
| NspI | RCATGY | 1 cut(s) | 1475 |
| PciSI | GCTCTTC | 1 cut(s) | 483 |
| PctI | GAATGC | 3 cut(s) | 301, 1462, 1796 |
| PfeI | GAWTC | 9 cut(s) | 136, 395, 460, 878, 1219, 1533, 1651, 1748, 2023 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 69 |
| PkrI | GCNGC | 1 cut(s) | 1795 |
| PleI | GAGTC | 1 cut(s) | 1207 |
| PpsI | GAGTC | 1 cut(s) | 1207 |
| PpuMI | RGGWCCY | 1 cut(s) | 592 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1671 |
| PshBI | ATTAAT | 1 cut(s) | 1343 |
| PsiI | TTATAA | 1 cut(s) | 1137 |
| Psp124BI | GAGCTC | 1 cut(s) | 1597 |
| Psp5II | RGGWCCY | 1 cut(s) | 592 |
| PspEI | GGTNACC | 1 cut(s) | 245 |
| PspN4I | GGNNCC | 2 cut(s) | 13, 333 |
| PspPI | GGNCC | 2 cut(s) | 592, 822 |
| PspPPI | RGGWCCY | 1 cut(s) | 592 |
| PsuI | RGATCY | 6 cut(s) | 11, 337, 373, 1420, 1717, 1764 |
| RsaI | GTAC | 4 cut(s) | 105, 585, 1757, 1826 |
| RsaNI | GTAC | 4 cut(s) | 104, 584, 1756, 1825 |
| RseI | CAYNNNNRTG | 1 cut(s) | 993 |
| SacI | GAGCTC | 1 cut(s) | 1597 |
| SapI | GCTCTTC | 1 cut(s) | 483 |
| SaqAI | TTAA | 9 cut(s) | 240, 306, 378, 531, 905, 1010, 1326, 1343, 1506 |
| SatI | GCNGC | 1 cut(s) | 1794 |
| Sau96I | GGNCC | 2 cut(s) | 592, 822 |
| ScaI | AGTACT | 1 cut(s) | 585 |
| SchI | GAGTC | 1 cut(s) | 1208 |
| SduI | GDGCHC | 8 cut(s) | 182, 709, 778, 990, 1236, 1442, 1543, 1597 |
| SfaNI | GCATC | 1 cut(s) | 897 |
| SfcI | CTRYAG | 1 cut(s) | 1669 |
| SinI | GGWCC | 2 cut(s) | 592, 822 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 993 |
| SmlI | CTYRAG | 8 cut(s) | 239, 425, 587, 797, 893, 1043, 1505, 1546 |
| SmoI | CTYRAG | 8 cut(s) | 239, 425, 587, 797, 893, 1043, 1505, 1546 |
| SsiI | CCGC | 2 cut(s) | 163, 820 |
| SspMI | CTAG | 5 cut(s) | 183, 392, 1434, 1692, 2041 |
| SstI | GAGCTC | 1 cut(s) | 1597 |
| StyI | CCWWGG | 1 cut(s) | 1386 |
| TaaI | ACNGT | 6 cut(s) | 500, 647, 834, 1575, 1673, 2036 |
| TaiI | ACGT | 1 cut(s) | 1873 |
| TaqI | TCGA | 4 cut(s) | 29, 957, 1531, 1802 |
| TatI | WGTACW | 3 cut(s) | 103, 583, 1755 |
| TfiI | GAWTC | 9 cut(s) | 136, 395, 460, 878, 1219, 1533, 1651, 1748, 2023 |
| Tru1I | TTAA | 9 cut(s) | 240, 306, 378, 531, 905, 1010, 1326, 1343, 1506 |
| Tru9I | TTAA | 9 cut(s) | 240, 306, 378, 531, 905, 1010, 1326, 1343, 1506 |
| TscAI | CASTG | 4 cut(s) | 652, 1023, 1134, 1870 |
| TseI | GCWGC | 1 cut(s) | 1793 |
| TspDTI | ATGAA | 7 cut(s) | 428, 777, 858, 990, 1007, 1067, 1344 |
| TspGWI | ACGGA | 2 cut(s) | 330, 571 |
| TspRI | CASTG | 4 cut(s) | 652, 1023, 1134, 1870 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 69 |
| Vha464I | CTTAAG | 2 cut(s) | 239, 1505 |
| VneI | GTGCAC | 1 cut(s) | 705 |
| VpaK11BI | GGWCC | 2 cut(s) | 592, 822 |
| VspI | ATTAAT | 1 cut(s) | 1343 |
| XapI | RAATTY | 3 cut(s) | 284, 898, 1402 |
| XbaI | TCTAGA | 1 cut(s) | 1691 |
| XceI | RCATGY | 1 cut(s) | 1475 |
| XspI | CTAG | 5 cut(s) | 183, 392, 1434, 1692, 2041 |
| ZrmI | AGTACT | 1 cut(s) | 585 |