Rorug07G0164200
ERF Family

Belongs to the calycin superfamily. Lipocalin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0018994
Physical Location & Seq
Reverse (-)
13166687 .. 13172522
5836 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0164200.1

Sequence Viewer

Length: 1824 bp
ATGGGGAACAGGAGGTTCGCGCAGATCGCGACGAGCGACGACGAAGAGGACGACTTCGCGCGGCAGAGCCAGCAGTCGTCGGAGGAAGTTCCGGCGTCGACGAGGAAGAGGAAGCTGAAGAGAGTGGCGGAGGAGGAGGAGGAGGAGGAGGCGGAGAGGCGGAGGAGTAGGAAGAAGAAGAAGAAGAAGGGGGAGGAAGAGGCCGAAACGGCGTCGGAGGGAGAAGAGGAGGAAGAAGAGGAGGAGGAGGATGAGCTGGAAGCCAAGCCGATTGGGGAGATGGTTAAGATTTCCGGCAAGGGGAGAACTCGGAGGCATCATTACCAGGCTTTTGAGTATGATGGAAACCAATACGAGCTGGAGGATCCGGTTCTTCTAACGCCCTCTGATAGAAGAGAGAAGCCTTATGTGGCAATTATTAAGGATATCACTCAGCTCAAAGATGGGAACATGGTGGTGTTAGGGCAATGGTTTTATCGTCCTGAAGAGGCAGAGAAAAAAGGTGGTGGAAACTGGCAGTCACAAGACACAAGGGAGCTGTTCTATAGTTTTCATCGTGATGAGTGTCCAGCAGAATCTGTGATGCATAAATGTGTGGTTCATTTTGTTCCTTTACACAAGCAGCTGCCAAAGCGTAAAGAGCATCCTGGATTCATTGTGCAAAAGGTGTATGACACCGATGGGAAGAAGCTTTGGAAGCTAACAGACAGAGACTATGAAGAAGATAAGCAGCATGAAATTGACTTACTAGTTCAGAAAACCATGCGAAGATTGGTAGATCTTCCTGATATTGAGATTGGAGATCCAACTACTAATCAGGATGATCAATTGAAGAGCAAAAGAAATTTGATTAAAAAGAATATAGCACCCCTTGATGTTTCTAGAGTGGAAGAAGCAACAACTAGGCTTGGTAAAAATCAAAAAGCTGAAACACCTGGAAGCTGTATGACTAATTCCTCAGAGTACCATCGTATTTTAGTTGAGCTCAATGCATTAACTGGAGACACACATCGTGACAAATGGTTGGAGAAACTTATAAAAGAGCTACAGTTCATATGCAGTTCTACTGACAGCATGAACGGAGGTGATAAAAGAAAATCTGGTTCTGATGAAACTGACTGTAAGTCCCCAGATGTTGCAAATGGACGTCAGGATACAAATCTCAAGGGCGGCAAGCCTTTTCACTGGCCAGATGATGCTGTCCGTGCAGCTACTGCTCTGGAGAAGGCCTCACATGATTCCCTCTCCTCAGATTACCAGAAGTATAACCAAAAATTGCGGTCATTGTCCTACAATCTCTCGAAACAAGTGGTGCTAGCCCGCCGTCTGCTAAGTGGAGAGTTAGAGCCTTCAACAATACTAAATATGTCACCAGATGAGTTAAAGGAGGGTTTAACAGCTGAGGAGAGAGCAATGAAGGAGCCTGATGAGTCAGAGCGTATGCAGATGACTGATGCGCGTTGCACAAGATGTTCGGAGCTCAAAGTAGGAGTGAGAAACATCATTCAAGCAGGACATGGTGCTCGCTATGAGTTGGAGTGTACTGCCTGTGGTAATATGTGGTACGCCGCTCGAGATGCAGTTTCTATGCTTACTATTGACACACCAAGTTCAAACAAGAATGTTGGTACTGTTCCATTGGCCACTGCTAAATTTGAAGATGTTGAGAAGAAGCTGGTCAGTCCCCGTGAATCTGACAAGACAGCAGCCCCCGAAACTATAAAAAAGACTACTGAAGCATATATGCCCGTCTTAGAGGCACAAAGATCATTTGGTAAGTCTAAAAGGGAAGAAAACTCTGAATCTGCAAAGAATGCTGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000302 GO:0001101 GO:0001817 GO:0001818 GO:0001952 GO:0001953 GO:0002682 GO:0002683 GO:0002685 GO:0002686 GO:0003006 GO:0003674 GO:0005488 GO:0005496 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005829 GO:0005840 GO:0005975 GO:0005996 GO:0006006 GO:0006629 GO:0006950 GO:0006979 GO:0007162 GO:0007275 GO:0007399 GO:0007417 GO:0007420 GO:0007568 GO:0008150 GO:0008152 GO:0008285 GO:0008289 GO:0009266 GO:0009314 GO:0009408 GO:0009414 GO:0009415 GO:0009416 GO:0009507 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009611 GO:0009628 GO:0009635 GO:0009636 GO:0009642 GO:0009644 GO:0009719 GO:0009725 GO:0009737 GO:0009791 GO:0009888 GO:0009892 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010035 GO:0010117 GO:0010154 GO:0010431 GO:0010565 GO:0010605 GO:0010640 GO:0010642 GO:0010646 GO:0010648 GO:0010810 GO:0010812 GO:0012505 GO:0014012 GO:0015485 GO:0016020 GO:0016043 GO:0019216 GO:0019217 GO:0019222 GO:0019318 GO:0021700 GO:0022008 GO:0022414 GO:0022626 GO:0023051 GO:0023057 GO:0030030 GO:0030154 GO:0030155 GO:0030182 GO:0030334 GO:0030336 GO:0030425 GO:0031099 GO:0031102 GO:0031103 GO:0031175 GO:0031323 GO:0031324 GO:0031347 GO:0031348 GO:0031976 GO:0031977 GO:0031984 GO:0032101 GO:0032102 GO:0032386 GO:0032387 GO:0032501 GO:0032502 GO:0032504 GO:0032642 GO:0032682 GO:0032879 GO:0032880 GO:0032934 GO:0032991 GO:0033157 GO:0033554 GO:0033993 GO:0034357 GO:0034442 GO:0034443 GO:0036094 GO:0036477 GO:0040007 GO:0040012 GO:0040013 GO:0042060 GO:0042127 GO:0042221 GO:0042246 GO:0042306 GO:0042308 GO:0042493 GO:0042651 GO:0042995 GO:0043005 GO:0043025 GO:0043178 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044087 GO:0044238 GO:0044281 GO:0044297 GO:0044421 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044445 GO:0044446 GO:0044463 GO:0044464 GO:0045833 GO:0045922 GO:0046320 GO:0046322 GO:0046822 GO:0046823 GO:0048316 GO:0048468 GO:0048471 GO:0048513 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048589 GO:0048608 GO:0048609 GO:0048660 GO:0048662 GO:0048666 GO:0048678 GO:0048699 GO:0048731 GO:0048856 GO:0048869 GO:0050727 GO:0050728 GO:0050746 GO:0050748 GO:0050789 GO:0050794 GO:0050896 GO:0051049 GO:0051051 GO:0051128 GO:0051129 GO:0051171 GO:0051172 GO:0051223 GO:0051224 GO:0051239 GO:0051241 GO:0051246 GO:0051248 GO:0051270 GO:0051271 GO:0051716 GO:0051893 GO:0051895 GO:0055035 GO:0060255 GO:0060322 GO:0060341 GO:0060587 GO:0060588 GO:0061458 GO:0061564 GO:0062012 GO:0062014 GO:0065007 GO:0070201 GO:0071637 GO:0071638 GO:0071695 GO:0071704 GO:0071840 GO:0080090 GO:0080134 GO:0090087 GO:0090109 GO:0090317 GO:0097159 GO:0097305 GO:0097447 GO:0097458 GO:0120025 GO:0120036 GO:0120038 GO:1900015 GO:1900016 GO:1900180 GO:1900181 GO:1901562 GO:1901700 GO:1901888 GO:1901889 GO:1903391 GO:1903392 GO:1903827 GO:1903828 GO:1904589 GO:1904590 GO:1904950 GO:1990904 GO:2000097 GO:2000098 GO:2000145 GO:2000146 GO:2000401 GO:2000402 GO:2000404 GO:2000405
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Lipocalin_2

Protein Analysis

607

Amino Acids

69.26

Weight (kDa)

5.52

Isoelectric Point (pI)

61.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BAH PF01426 117 - 234 3.4e-20 BAH domain
TFIIS_M PF07500 333 - 474 8.2e-15 Transcription factor S-II (TFIIS), central domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0018994)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr3g0496801
rosa_laevigata RLG00000022535
rosa_multiflora Rmu_co8300283.1_g000001
rosa_rugosa Rorug03G0327900 Rorug07G0164200
rosa_samantha Rh3AG331600 Rh4AG220100 Rh4BG332600 Rh4CG347900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1037
AatII GACGTC 1 cut(s) 1150
AccBSI CCGCTC 1 cut(s) 1571
AccI GTMKAC 1 cut(s) 98
AccII CGCG 5 cut(s) 20, 29, 59, 61, 1459
AciI CCGC 8 cut(s) 61, 128, 152, 160, 1170, 1279, 1321, 1569
AclWI GGATC 3 cut(s) 359, 372, 797
AcoI YGGCCR 2 cut(s) 1187, 1641
AcsI RAATTY 2 cut(s) 844, 1652
AcuI CTGAAG 3 cut(s) 137, 504, 1755
AcyI GRCGYC 3 cut(s) 95, 212, 1147
AdeI CACNNNGTG 1 cut(s) 1013
AfaI GTAC 4 cut(s) 965, 1543, 1565, 1630
AfiI CCNNNNNNNGG 1 cut(s) 300
AgsI TTSAA 5 cut(s) 832, 1353, 1508, 1614, 1658
AhdI GACNNNNNGTC 1 cut(s) 1123
AhlI ACTAGT 1 cut(s) 748
AjnI CCWGG 3 cut(s) 324, 646, 934
Alw21I GWGCWC 3 cut(s) 987, 1482, 1525
Alw26I GTCTC 2 cut(s) 705, 996
AlwI GGATC 3 cut(s) 359, 372, 797
AlwNI CAGNNNCTG 2 cut(s) 578, 1214
Ama87I CYCGRG 1 cut(s) 1572
AoxI GGCC 4 cut(s) 201, 1187, 1227, 1641
ApeKI GCWGC 5 cut(s) 622, 625, 730, 1208, 1706
ApoI RAATTY 2 cut(s) 844, 1652
AspLEI GCGC 3 cut(s) 22, 61, 1459
AsuHPI GGTGA 2 cut(s) 1097, 1362
AsuNHI GCTAGC 1 cut(s) 1315
AvaI CYCGRG 1 cut(s) 1572
BalI TGGCCA 2 cut(s) 1189, 1643
BamHI GGATCC 1 cut(s) 364
BanII GRGCYC 2 cut(s) 987, 1482
Bbv12I GWGCWC 3 cut(s) 987, 1482, 1525
BbvCI CCTCAGC 1 cut(s) 1401
BbvI GCAGC 5 cut(s) 612, 634, 742, 1220, 1718
BccI CCATC 5 cut(s) 274, 335, 437, 674, 975
BceAI ACGGC 2 cut(s) 225, 1308
BciT130I CCWGG 3 cut(s) 326, 648, 936
BciVI GTATCC 1 cut(s) 1147
BclI TGATCA 1 cut(s) 823
BcoDI GTCTC 2 cut(s) 705, 996
BcuI ACTAGT 1 cut(s) 748
BfaI CTAG 4 cut(s) 749, 882, 903, 1316
BfmI CTRYAG 2 cut(s) 544, 1046
BfuI GTATCC 1 cut(s) 1147
BglI GCCNNNNNGGC 1 cut(s) 209
BglII AGATCT 1 cut(s) 778
BisI GCNGC 8 cut(s) 62, 623, 626, 731, 1171, 1209, 1569, 1707
BlsI GCNGC 8 cut(s) 63, 624, 627, 732, 1172, 1210, 1570, 1708
Bme1390I CCNGG 3 cut(s) 326, 648, 936
BmeRI GACNNNNNGTC 1 cut(s) 1123
BmeT110I CYCGRG 1 cut(s) 1572
BmiI GGNNCC 2 cut(s) 366, 1422
BmrFI CCNGG 3 cut(s) 326, 648, 936
BmsI GCATC 6 cut(s) 325, 573, 652, 1186, 1444, 1567
BmtI GCTAGC 1 cut(s) 1319
BplI GAGNNNNNCTC 2 cut(s) 1214, 1246
BpmI CTGGAG 3 cut(s) 380, 1020, 1241
Bpu10I CCTNAGC 1 cut(s) 1401
BpuEI CTTGAG 1 cut(s) 1148
BsaBI GATNNNNATC 1 cut(s) 1158
BsaHI GRCGYC 3 cut(s) 95, 212, 1147
BsaWI WCCGGW 1 cut(s) 367
Bsc4I CCNNNNNNNGG 1 cut(s) 300
Bse1I ACTGG 3 cut(s) 518, 1003, 1190
Bse3DI GCAATG 2 cut(s) 473, 1419
Bse8I GATNNNNATC 1 cut(s) 1158
BseBI CCWGG 3 cut(s) 326, 648, 936
BseGI GGATG 3 cut(s) 256, 643, 826
BseJI GATNNNNATC 1 cut(s) 1158
BseLI CCNNNNNNNGG 1 cut(s) 300
BseMI GCAATG 2 cut(s) 473, 1419
BseMII CTCAG 5 cut(s) 446, 972, 1263, 1392, 1809
BseNI ACTGG 3 cut(s) 518, 1003, 1190
BseXI GCAGC 5 cut(s) 612, 634, 742, 1220, 1718
BsgI GTGCAG 1 cut(s) 1227
Bsh1236I CGCG 5 cut(s) 20, 29, 59, 61, 1459
BshFI GGCC 4 cut(s) 203, 1189, 1229, 1643
BsiHKAI GWGCWC 3 cut(s) 987, 1482, 1525
BsiHKCI CYCGRG 1 cut(s) 1572
BsiSI CCGG 3 cut(s) 92, 294, 368
BslFI GGGAC 2 cut(s) 1111, 1668
BslI CCNNNNNNNGG 1 cut(s) 300
BsmAI GTCTC 2 cut(s) 705, 996
BsmFI GGGAC 2 cut(s) 1111, 1668
BsmI GAATGC 1 cut(s) 1819
BsnI GGCC 4 cut(s) 203, 1189, 1229, 1643
BsoBI CYCGRG 1 cut(s) 1572
Bsp1286I GDGCHC 3 cut(s) 987, 1482, 1525
Bsp143I GATC 6 cut(s) 24, 364, 778, 802, 823, 1766
Bsp68I TCGCGA 1 cut(s) 29
BspACI CCGC 8 cut(s) 61, 128, 152, 160, 1170, 1279, 1321, 1569
BspANI GGCC 4 cut(s) 203, 1189, 1229, 1643
BspCNI CTCAG 5 cut(s) 445, 971, 1262, 1393, 1810
BspFNI CGCG 5 cut(s) 20, 29, 59, 61, 1459
BspLI GGNNCC 2 cut(s) 366, 1422
BspOI GCTAGC 1 cut(s) 1319
BspPI GGATC 3 cut(s) 359, 372, 797
BspQI GCTCTTC 1 cut(s) 827
BsrBI CCGCTC 1 cut(s) 1571
BsrDI GCAATG 2 cut(s) 473, 1419
BsrI ACTGG 3 cut(s) 518, 1003, 1190
BssMI GATC 6 cut(s) 24, 364, 778, 802, 823, 1766
BssNI GRCGYC 3 cut(s) 95, 212, 1147
Bst2UI CCWGG 3 cut(s) 326, 648, 936
Bst4CI ACNGT 3 cut(s) 1050, 1121, 1633
Bst6I CTCTTC 9 cut(s) 39, 101, 113, 192, 219, 231, 388, 480, 827
BstACI GRCGYC 3 cut(s) 95, 212, 1147
BstAPI GCANNNNNTGC 2 cut(s) 1214, 1814
BstC8I GCNNGC 5 cut(s) 71, 1175, 1317, 1321, 1525
BstDEI CTNAG 7 cut(s) 432, 958, 1249, 1331, 1401, 1753, 1818
BstF5I GGATG 3 cut(s) 256, 643, 826
BstFNI CGCG 5 cut(s) 20, 29, 59, 61, 1459
BstHHI GCGC 3 cut(s) 22, 61, 1459
BstKTI GATC 6 cut(s) 27, 367, 781, 805, 826, 1769
BstMAI GTCTC 2 cut(s) 705, 996
BstMBI GATC 6 cut(s) 24, 364, 778, 802, 823, 1766
BstNI CCWGG 3 cut(s) 326, 648, 936
BstSCI CCNGG 3 cut(s) 324, 646, 934
BstSFI CTRYAG 2 cut(s) 544, 1046
BstUI CGCG 5 cut(s) 20, 29, 59, 61, 1459
BstV1I GCAGC 5 cut(s) 612, 634, 742, 1220, 1718
BstX2I RGATCY 3 cut(s) 364, 778, 802
BstYI RGATCY 3 cut(s) 364, 778, 802
BsuI GTATCC 1 cut(s) 1147
BsuRI GGCC 4 cut(s) 203, 1189, 1229, 1643
BtsCI GGATG 3 cut(s) 256, 643, 826
BtsI GCAGTG 1 cut(s) 1644
BtsIMutI CAGTG 2 cut(s) 1183, 1644
BtuMI TCGCGA 1 cut(s) 29
Cac8I GCNNGC 5 cut(s) 71, 1175, 1317, 1321, 1525
CaiI CAGNNNCTG 2 cut(s) 578, 1214
CfoI GCGC 3 cut(s) 22, 61, 1459
CseI GACGC 2 cut(s) 84, 201
Csp6I GTAC 4 cut(s) 964, 1542, 1564, 1629
CviAII CATG 6 cut(s) 451, 734, 763, 1075, 1235, 1517
CviQI GTAC 4 cut(s) 964, 1542, 1564, 1629
DdeI CTNAG 7 cut(s) 432, 958, 1249, 1331, 1401, 1753, 1818
DpnI GATC 6 cut(s) 26, 366, 780, 804, 825, 1768
DpnII GATC 6 cut(s) 24, 364, 778, 802, 823, 1766
DraIII CACNNNGTG 1 cut(s) 1013
DriI GACNNNNNGTC 1 cut(s) 1123
EaeI YGGCCR 2 cut(s) 1187, 1641
Eam1104I CTCTTC 9 cut(s) 39, 101, 113, 192, 219, 231, 388, 480, 827
Eam1105I GACNNNNNGTC 1 cut(s) 1123
EarI CTCTTC 9 cut(s) 39, 101, 113, 192, 219, 231, 388, 480, 827
EciI GGCGGA 3 cut(s) 143, 167, 175
Ecl136II GAGCTC 2 cut(s) 985, 1480
Eco147I AGGCCT 1 cut(s) 1229
Eco24I GRGCYC 2 cut(s) 987, 1482
Eco32I GATATC 1 cut(s) 427
Eco53kI GAGCTC 2 cut(s) 985, 1480
Eco57I CTGAAG 3 cut(s) 137, 504, 1755
Eco88I CYCGRG 1 cut(s) 1572
EcoICRI GAGCTC 2 cut(s) 985, 1480
EcoRII CCWGG 3 cut(s) 324, 646, 934
EcoRV GATATC 1 cut(s) 427
EcoT22I ATGCAT 2 cut(s) 588, 994
EcoT38I GRGCYC 2 cut(s) 987, 1482
FaeI CATG 6 cut(s) 454, 737, 766, 1078, 1238, 1520
FaqI GGGAC 2 cut(s) 1111, 1668
FatI CATG 6 cut(s) 450, 733, 762, 1074, 1234, 1516
FauI CCCGC 1 cut(s) 1328
FauNDI CATATG 1 cut(s) 1055
FbaI TGATCA 1 cut(s) 823
FblI GTMKAC 1 cut(s) 98
Fnu4HI GCNGC 8 cut(s) 62, 623, 626, 731, 1171, 1209, 1569, 1707
FokI GGATG 3 cut(s) 263, 630, 833
FriOI GRGCYC 2 cut(s) 987, 1482
Fsp4HI GCNGC 8 cut(s) 62, 623, 626, 731, 1171, 1209, 1569, 1707
FspBI CTAG 4 cut(s) 749, 882, 903, 1316
GlaI GCGC 3 cut(s) 21, 60, 1458
GluI GCNGC 8 cut(s) 62, 623, 626, 731, 1171, 1209, 1569, 1707
GsuI CTGGAG 3 cut(s) 380, 1020, 1241
HaeIII GGCC 4 cut(s) 203, 1189, 1229, 1643
HapII CCGG 3 cut(s) 92, 294, 368
HgaI GACGC 2 cut(s) 84, 201
HhaI GCGC 3 cut(s) 22, 61, 1459
Hin1I GRCGYC 3 cut(s) 95, 212, 1147
Hin1II CATG 6 cut(s) 454, 737, 766, 1078, 1238, 1520
Hin6I GCGC 3 cut(s) 20, 59, 1457
HinP1I GCGC 3 cut(s) 20, 59, 1457
HincII GTYRAC 1 cut(s) 99
HindII GTYRAC 1 cut(s) 99
HindIII AAGCTT 1 cut(s) 689
HinfI GANTC 6 cut(s) 575, 651, 1238, 1430, 1691, 1802
HpaII CCGG 3 cut(s) 92, 294, 368
HphI GGTGA 2 cut(s) 1097, 1362
Hpy166II GTNNAC 2 cut(s) 99, 1542
Hpy8I GTNNAC 2 cut(s) 99, 1542
Hpy99I CGWCG 7 cut(s) 34, 41, 44, 82, 100, 103, 217
HpyAV CCTTC 4 cut(s) 181, 1219, 1359, 1411
HpyCH4III ACNGT 3 cut(s) 1050, 1121, 1633
HpyCH4IV ACGT 1 cut(s) 1147
HpyF3I CTNAG 7 cut(s) 432, 958, 1249, 1331, 1401, 1753, 1818
HpySE526I ACGT 1 cut(s) 1147
Hsp92I GRCGYC 3 cut(s) 95, 212, 1147
Hsp92II CATG 6 cut(s) 454, 737, 766, 1078, 1238, 1520
HspAI GCGC 3 cut(s) 20, 59, 1457
Ksp22I TGATCA 1 cut(s) 823
Kzo9I GATC 6 cut(s) 24, 364, 778, 802, 823, 1766
LguI GCTCTTC 1 cut(s) 827
LmnI GCTCC 3 cut(s) 535, 1420, 1477
Lsp1109I GCAGC 5 cut(s) 612, 634, 742, 1220, 1718
LweI GCATC 6 cut(s) 325, 573, 652, 1186, 1444, 1567
MaeI CTAG 4 cut(s) 749, 882, 903, 1316
MaeII ACGT 1 cut(s) 1147
MaeIII GTNAC 3 cut(s) 519, 1013, 1368
MalI GATC 6 cut(s) 26, 366, 780, 804, 825, 1768
MbiI CCGCTC 1 cut(s) 1571
MboI GATC 6 cut(s) 24, 364, 778, 802, 823, 1766
MfeI CAATTG 1 cut(s) 827
MflI RGATCY 3 cut(s) 364, 778, 802
MhlI GDGCHC 3 cut(s) 987, 1482, 1525
MlsI TGGCCA 2 cut(s) 1189, 1643
MluCI AATT 7 cut(s) 414, 738, 827, 844, 952, 1274, 1652
MluNI TGGCCA 2 cut(s) 1189, 1643
MlyI GAGTC 1 cut(s) 1439
MmeI TCCRAC 5 cut(s) 60, 195, 830, 1005, 1515
Mox20I TGGCCA 2 cut(s) 1189, 1643
Mph1103I ATGCAT 2 cut(s) 588, 994
MscI TGGCCA 2 cut(s) 1189, 1643
MseI TTAA 6 cut(s) 285, 420, 852, 995, 1382, 1394
MslI CAYNNNNRTG 3 cut(s) 455, 558, 591
Msp20I TGGCCA 2 cut(s) 1189, 1643
MspA1I CMGCKG 2 cut(s) 625, 1400
MspI CCGG 3 cut(s) 92, 294, 368
MspR9I CCNGG 3 cut(s) 326, 648, 936
MunI CAATTG 1 cut(s) 827
Mva1269I GAATGC 1 cut(s) 1819
MvaI CCWGG 3 cut(s) 326, 648, 936
MvnI CGCG 5 cut(s) 20, 29, 59, 61, 1459
NdeI CATATG 1 cut(s) 1055
NdeII GATC 6 cut(s) 24, 364, 778, 802, 823, 1766
NheI GCTAGC 1 cut(s) 1315
NlaIII CATG 6 cut(s) 454, 737, 766, 1078, 1238, 1520
NlaIV GGNNCC 2 cut(s) 366, 1422
NmuCI GTSAC 3 cut(s) 519, 1013, 1368
NruI TCGCGA 1 cut(s) 29
NsiI ATGCAT 2 cut(s) 588, 994
PaeR7I CTCGAG 1 cut(s) 1572
PceI AGGCCT 1 cut(s) 1229
PciSI GCTCTTC 1 cut(s) 827
PcsI WCGNNNNNNNCGW 2 cut(s) 33, 48
PctI GAATGC 1 cut(s) 1819
PfeI GAWTC 5 cut(s) 575, 651, 1238, 1691, 1802
PfoI TCCNGGA 1 cut(s) 646
PkrI GCNGC 8 cut(s) 63, 624, 627, 732, 1172, 1210, 1570, 1708
PleI GAGTC 1 cut(s) 1438
PpsI GAGTC 1 cut(s) 1438
PsiI TTATAA 1 cut(s) 1037
Psp124BI GAGCTC 2 cut(s) 987, 1482
Psp6I CCWGG 3 cut(s) 324, 646, 934
PspGI CCWGG 3 cut(s) 324, 646, 934
PspN4I GGNNCC 2 cut(s) 366, 1422
PstNI CAGNNNCTG 2 cut(s) 578, 1214
PsuI RGATCY 3 cut(s) 364, 778, 802
PvuII CAGCTG 2 cut(s) 625, 1400
RruI TCGCGA 1 cut(s) 29
RsaI GTAC 4 cut(s) 965, 1543, 1565, 1630
RsaNI GTAC 4 cut(s) 964, 1542, 1564, 1629
RseI CAYNNNNRTG 3 cut(s) 455, 558, 591
SacI GAGCTC 2 cut(s) 987, 1482
SalI GTCGAC 1 cut(s) 97
SapI GCTCTTC 1 cut(s) 827
SaqAI TTAA 6 cut(s) 285, 420, 852, 995, 1382, 1394
SatI GCNGC 8 cut(s) 62, 623, 626, 731, 1171, 1209, 1569, 1707
Sau3AI GATC 6 cut(s) 24, 364, 778, 802, 823, 1766
SchI GAGTC 1 cut(s) 1439
ScrFI CCNGG 3 cut(s) 326, 648, 936
SduI GDGCHC 3 cut(s) 987, 1482, 1525
SfaNI GCATC 6 cut(s) 325, 573, 652, 1186, 1444, 1567
SfcI CTRYAG 2 cut(s) 544, 1046
Sfr274I CTCGAG 1 cut(s) 1572
SgrDI CGTCGACG 1 cut(s) 97
SlaI CTCGAG 1 cut(s) 1572
SmiMI CAYNNNNRTG 3 cut(s) 455, 558, 591
SmlI CTYRAG 2 cut(s) 1163, 1572
SmoI CTYRAG 2 cut(s) 1163, 1572
SpeI ACTAGT 1 cut(s) 748
Sse9I AATT 7 cut(s) 414, 738, 827, 844, 952, 1274, 1652
SseBI AGGCCT 1 cut(s) 1229
SsiI CCGC 8 cut(s) 61, 128, 152, 160, 1170, 1279, 1321, 1569
SspMI CTAG 4 cut(s) 749, 882, 903, 1316
SstI GAGCTC 2 cut(s) 987, 1482
StuI AGGCCT 1 cut(s) 1229
StyD4I CCNGG 3 cut(s) 324, 646, 934
TaaI ACNGT 3 cut(s) 1050, 1121, 1633
TaiI ACGT 1 cut(s) 1150
TaqI TCGA 3 cut(s) 98, 1301, 1573
TasI AATT 7 cut(s) 414, 738, 827, 844, 952, 1274, 1652
TatI WGTACW 1 cut(s) 1541
TauI GCSGC 3 cut(s) 64, 1173, 1571
TfiI GAWTC 5 cut(s) 575, 651, 1238, 1691, 1802
Tru1I TTAA 6 cut(s) 285, 420, 852, 995, 1382, 1394
Tru9I TTAA 6 cut(s) 285, 420, 852, 995, 1382, 1394
TscAI CASTG 2 cut(s) 1190, 1651
TseFI GTSAC 3 cut(s) 519, 1013, 1368
TseI GCWGC 5 cut(s) 622, 625, 730, 1208, 1706
Tsp45I GTSAC 3 cut(s) 519, 1013, 1368
TspDTI ATGAA 9 cut(s) 542, 590, 643, 732, 750, 1042, 1091, 1125, 1430
TspGWI ACGGA 2 cut(s) 1095, 1193
TspRI CASTG 2 cut(s) 1190, 1651
XapI RAATTY 2 cut(s) 844, 1652
XbaI TCTAGA 1 cut(s) 881
XcmI CCANNNNNNNNNTGG 1 cut(s) 769
XhoI CTCGAG 1 cut(s) 1572
XmiI GTMKAC 1 cut(s) 98
XspI CTAG 4 cut(s) 749, 882, 903, 1316
ZraI GACGTC 1 cut(s) 1148
Zsp2I ATGCAT 2 cut(s) 588, 994
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.