Rorug07G0230500

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0006263
Physical Location & Seq
Forward (+)
21034657 .. 21037742
3086 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0230500.1

Sequence Viewer

Length: 1983 bp
ATGGCGACCATAGCTCCACCCTCTTCCTCCTTCTCCAAACCTTCTCTTCCCACCAAATCCCCAAACCCACTTTCCCGATTTGCCCTCCCCTACTTCCCTCACCCCAACAAGCACACACCTTTCCGCCCTCTCCACATCTCCAACTCTCTCACCCCCAAAGCCGCCACCACACCTGTCACCGCCACCACAACAACCACCGCTGCTCCTCCAGACCCAGCATCTCCAATTCCCCGATTTGCCCCCGACGAGCCCAGAAAAGGCGCCGATGTCCTCGTGGAGGCGCTCGAACGCCAGGGCGTCACCACTGTGTTCGCCTACCCCGGCGGCGCGTCGATGGAGATCCACCAGGCCCTCACGCGCTCCACCACCATCCGCAACGTCCTCCCCCGCCACGAGCAGGGAGGCGTTTTCGCGGCCGAGGGCTACGCGCGCGCGTCGGGGCTTCCGGGCGTATGCATTGCCACCTCCGGCCCTGGCGCGACCAATCTGGTCAGCGGTCTCGCCGACGCGCTCATGGACAGCATTCCGATGGTGGCAATCACCGGACAAGTGCCCCGCCGGATGATCGGAACCGATGCTTTTCAGGAGACGCCGATTGTTGAGGTAACCAGATCCATCACCAAGCACAATTACCTTGTTCTTGATGTAGAGGACATTCCTATAATTGTTAAAGAAGCATTTTTCCTAGCTACATCGGGTAGACCCGGCCCGGTTTTGATTGATATACCCAAAGATGTGCAGCAACAGCTTGTGGTTCCGGATTGGGACCAACCCATTAGGTTAACTGGTTACATGTCTAGGTTGCCCAAAAGCCCCAGTGAGGTACATCTGGAGCAGATTGTGAGGTTGGTGTCGGAGTCCAAGAAACCGGTGTTGTATGTTGGTGGAGGGTGTTTGAACTCGAGTGAGGAGTTGAGGCGGTTCGTGGAGCTTACTGGGATCCCGGTTACTAGTACTTTGATGGGTCTCGGGACTTACCCGAGCTCCGATGAGGATGACTTGTCGCTGCAGATGCTTGGAATGCATGGGACTGTTTATGCTAACTATGCTGTGGACAAGGCCGACTTGTTGCTGGCTTTTGGTGTGAGGTTTGATGATCGTGTGACTGGGAAGCTGGAGGCCTTTGCTAGCCGGGCTAAGATAGTGCACATTGATATTGATTCTGCAGAGATTGGGAAGAACAAGCAGCCTCATGTGTCTGTTTGTGGTGATGTGAAACCAGCGTTACAAGGGTTGAACAGGATATTGGAGGGGAAATTGGAGAAGCTTAAGCTTGATTTTTCAGCTTGGAGGGCGGAGCTGAAAGAGCAGAAATTGAAGTTTCCATTGGGTTACAAGACTTTTGGGGAGGCCATCCCTCCTCAGTATGCCATTCAGGTTCTTGATGAGTTAACTGAAGGGAAGGCTATTATAAGCACCGGTGTCGGGCAACATCAGATGTGGGCTGCTCAACACTACAAATATCTTAGGCCTCGACAGTGGTTGACTTCGGGGGGTTTAGGAGCCATGGGTTTTGGATTGCCAGCTGCTATGGGGGCCGCGGCAGCAAATCCAGATGCTATTGTTGTCGACATTGATGGTGATGGAAGTTTTATGATGAATGTCCAAGAATTGGCAACAATCAAGGTGGAGAATCTTCCTGTCAAAATTCTGCTGTTGAACAATCAACATTTGGGTATGGTTGTTCAGTGGGAGGATCGCTTCTATAAGGCAAACAGGGCTCACACATACTTGGGCAACCCAGCAAATGAGTCTGAGATCTTCCCAAATATGCTAAAGTTCGCAGAAGCTTGTGGGGTACCAGCTGCCCGTGTGACGAAGAAGGAAGACCTCAAAGCGGCAATCCAGAAAATGTTGGACACTCCTGGTCCATACTTGTTGGACGTTATTGTACCACATCAAGAGCATGTGTTGCCTATGATCCCAAGCGGTGGTGCTTTCAAAGATGTGATAACTGAGGGTGATGGAAGAATAAGTTACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

660

Amino Acids

71.54

Weight (kDa)

6.37

Isoelectric Point (pI)

39.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPP_enzyme_N PF02776 86 - 196 5.5e-37 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
TPP_enzyme_M PF00205 277 - 412 8.4e-45 Thiamine pyrophosphate enzyme, central domain
TPP_enzyme_C PF02775 474 - 629 1.6e-51 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1412
Acc65I GGTACC 1 cut(s) 1798
AccB1I GGYRCC 2 cut(s) 260, 1798
AccB7I CCANNNNNTGG 2 cut(s) 1612, 1931
AccI GTMKAC 2 cut(s) 700, 1569
AccIII TCCGGA 1 cut(s) 757
AclWI GGATC 6 cut(s) 334, 606, 934, 947, 1704, 1915
AcoI YGGCCR 1 cut(s) 414
AcsI RAATTY 1 cut(s) 1647
AcuI CTGAAG 1 cut(s) 1416
AcyI GRCGYC 3 cut(s) 261, 297, 590
AfaI GTAC 4 cut(s) 825, 955, 1800, 1893
AfiI CCNNNNNNNGG 8 cut(s) 257, 277, 397, 820, 1425, 1612, 1837, 1931
AflII CTTAAG 1 cut(s) 1268
AflIII ACRYGT 1 cut(s) 792
AgeI ACCGGT 2 cut(s) 868, 1418
AgsI TTSAA 5 cut(s) 898, 1237, 1318, 1660, 1942
AhlI ACTAGT 1 cut(s) 950
AjnI CCWGG 4 cut(s) 291, 345, 472, 1864
AjuI GAANNNNNNNTTGG 6 cut(s) 55, 87, 1229, 1261, 1310, 1342
AleI CACNNNNGTG 1 cut(s) 305
Alw21I GWGCWC 2 cut(s) 986, 1149
Alw26I GTCTC 3 cut(s) 503, 581, 971
Alw44I GTGCAC 1 cut(s) 1145
AlwI GGATC 6 cut(s) 334, 606, 934, 947, 1704, 1915
Ama87I CYCGRG 3 cut(s) 901, 968, 979
Aor13HI TCCGGA 1 cut(s) 757
AoxI GGCC 9 cut(s) 348, 414, 469, 706, 1059, 1119, 1350, 1469, 1536
ApaLI GTGCAC 1 cut(s) 1145
ApeKI GCWGC 8 cut(s) 200, 739, 1006, 1186, 1445, 1526, 1544, 1805
ApoI RAATTY 1 cut(s) 1647
AsiGI ACCGGT 2 cut(s) 868, 1418
Asp718I GGTACC 1 cut(s) 1798
AspLEI GCGC 9 cut(s) 263, 283, 329, 360, 430, 432, 434, 479, 511
AspS9I GGNCC 6 cut(s) 349, 470, 707, 766, 1536, 1868
AsuC2I CCSGG 6 cut(s) 321, 447, 705, 710, 944, 1133
AsuHPI GGTGA 9 cut(s) 92, 142, 169, 292, 532, 610, 1220, 1592, 1973
AsuNHI GCTAGC 1 cut(s) 1127
AvaI CYCGRG 3 cut(s) 901, 968, 979
AvaII GGWCC 2 cut(s) 766, 1868
BaeGI GKGCMC 2 cut(s) 555, 1149
BamHI GGATCC 1 cut(s) 939
BanI GGYRCC 2 cut(s) 260, 1798
BanII GRGCYC 3 cut(s) 252, 986, 1723
BauI CACGAG 2 cut(s) 272, 392
BbsI GAAGAC 1 cut(s) 1833
Bbv12I GWGCWC 2 cut(s) 986, 1149
BbvI GCAGC 8 cut(s) 187, 751, 993, 1198, 1432, 1513, 1556, 1792
BccI CCATC 9 cut(s) 328, 377, 523, 623, 955, 1361, 1571, 1577, 1958
BcgI CGANNNNNNTGC 2 cut(s) 1405, 1439
BciT130I CCWGG 4 cut(s) 293, 347, 474, 1866
BcnI CCSGG 6 cut(s) 321, 447, 705, 710, 944, 1133
BcoDI GTCTC 3 cut(s) 503, 581, 971
BcuI ACTAGT 1 cut(s) 950
BfaI CTAG 4 cut(s) 686, 798, 951, 1128
BfmI CTRYAG 2 cut(s) 1007, 1164
BfoI RGCGCY 2 cut(s) 264, 284
BfrI CTTAAG 1 cut(s) 1268
BglII AGATCT 1 cut(s) 1758
BmcAI AGTACT 1 cut(s) 955
Bme18I GGWCC 2 cut(s) 766, 1868
BmeT110I CYCGRG 3 cut(s) 901, 968, 979
BmgT120I GGNCC 6 cut(s) 349, 470, 707, 766, 1536, 1868
BmiI GGNNCC 8 cut(s) 262, 571, 756, 767, 941, 1504, 1537, 1800
BmrI ACTGGG 3 cut(s) 810, 945, 1116
BmsI GCATC 4 cut(s) 227, 565, 1002, 1546
BmtI GCTAGC 1 cut(s) 1131
BmuI ACTGGG 3 cut(s) 810, 945, 1116
BpiI GAAGAC 1 cut(s) 1833
BpmI CTGGAG 3 cut(s) 192, 851, 1136
BpuMI CCSGG 6 cut(s) 321, 447, 705, 710, 944, 1133
BsaBI GATNNNNATC 1 cut(s) 338
BsaHI GRCGYC 3 cut(s) 261, 297, 590
BsaI GGTCTC 2 cut(s) 503, 971
BsaJI CCNNGG 6 cut(s) 292, 319, 417, 472, 1506, 1539
BsaWI WCCGGW 4 cut(s) 542, 757, 868, 1418
BsaXI ACNNNNNCTCC 5 cut(s) 28, 187, 217, 968, 998
Bsc4I CCNNNNNNNGG 8 cut(s) 257, 277, 397, 820, 1425, 1612, 1837, 1931
Bse118I RCCGGY 2 cut(s) 868, 1418
Bse1I ACTGG 4 cut(s) 790, 816, 940, 1111
Bse3DI GCAATG 1 cut(s) 456
Bse8I GATNNNNATC 1 cut(s) 338
BseAI TCCGGA 1 cut(s) 757
BseBI CCWGG 4 cut(s) 293, 347, 474, 1866
BseDI CCNNGG 6 cut(s) 292, 319, 417, 472, 1506, 1539
BseGI GGATG 4 cut(s) 369, 567, 1000, 1353
BseJI GATNNNNATC 1 cut(s) 338
BseLI CCNNNNNNNGG 8 cut(s) 257, 277, 397, 820, 1425, 1612, 1837, 1931
BseMI GCAATG 1 cut(s) 456
BseMII CTCAG 3 cut(s) 1376, 1746, 1947
BseNI ACTGG 4 cut(s) 790, 816, 940, 1111
BsePI GCGCGC 2 cut(s) 428, 430
BseRI GAGGAG 3 cut(s) 195, 923, 1350
BseSI GKGCMC 2 cut(s) 555, 1149
BseX3I CGGCCG 1 cut(s) 414
BseXI GCAGC 8 cut(s) 187, 751, 993, 1198, 1432, 1513, 1556, 1792
BseYI CCCAGC 2 cut(s) 214, 1741
BsgI GTGCAG 1 cut(s) 758
Bsh1285I CGRYCG 1 cut(s) 417
BshFI GGCC 9 cut(s) 350, 416, 471, 708, 1061, 1121, 1352, 1471, 1538
BshNI GGYRCC 2 cut(s) 260, 1798
BshTI ACCGGT 2 cut(s) 868, 1418
BsiEI CGRYCG 1 cut(s) 417
BsiHKAI GWGCWC 2 cut(s) 986, 1149
BsiHKCI CYCGRG 3 cut(s) 901, 968, 979
BslFI GGGAC 3 cut(s) 779, 985, 1042
BslI CCNNNNNNNGG 8 cut(s) 257, 277, 397, 820, 1425, 1612, 1837, 1931
BsmAI GTCTC 3 cut(s) 503, 581, 971
BsmBI CGTCTC 1 cut(s) 581
BsmFI GGGAC 3 cut(s) 779, 985, 1042
BsmI GAATGC 2 cut(s) 522, 1026
BsnI GGCC 9 cut(s) 350, 416, 471, 708, 1061, 1121, 1352, 1471, 1538
Bso31I GGTCTC 2 cut(s) 503, 971
BsoBI CYCGRG 3 cut(s) 901, 968, 979
Bsp1286I GDGCHC 5 cut(s) 252, 555, 986, 1149, 1723
Bsp13I TCCGGA 1 cut(s) 757
Bsp143I GATC 8 cut(s) 339, 564, 611, 939, 1096, 1696, 1758, 1920
Bsp19I CCATGG 1 cut(s) 1506
BspANI GGCC 9 cut(s) 350, 416, 471, 708, 1061, 1121, 1352, 1471, 1538
BspCNI CTCAG 3 cut(s) 1375, 1747, 1948
BspEI TCCGGA 1 cut(s) 757
BspLI GGNNCC 8 cut(s) 262, 571, 756, 767, 941, 1504, 1537, 1800
BspMAI CTGCAG 2 cut(s) 1011, 1168
BspOI GCTAGC 1 cut(s) 1131
BspPI GGATC 6 cut(s) 334, 606, 934, 947, 1704, 1915
BspT107I GGYRCC 2 cut(s) 260, 1798
BspTI CTTAAG 1 cut(s) 1268
BspTNI GGTCTC 2 cut(s) 503, 971
BsrDI GCAATG 1 cut(s) 456
BsrFI RCCGGY 2 cut(s) 868, 1418
BsrI ACTGG 4 cut(s) 790, 816, 940, 1111
BssAI RCCGGY 2 cut(s) 868, 1418
BssECI CCNNGG 6 cut(s) 292, 319, 417, 472, 1506, 1539
BssHII GCGCGC 2 cut(s) 428, 430
BssMI GATC 8 cut(s) 339, 564, 611, 939, 1096, 1696, 1758, 1920
BssNI GRCGYC 3 cut(s) 261, 297, 590
BssSI CACGAG 2 cut(s) 272, 392
BssT1I CCWWGG 1 cut(s) 1506
Bst2BI CACGAG 2 cut(s) 272, 392
Bst2UI CCWGG 4 cut(s) 293, 347, 474, 1866
Bst4CI ACNGT 3 cut(s) 307, 1033, 1479
Bst6I CTCTTC 2 cut(s) 28, 51
BstACI GRCGYC 3 cut(s) 261, 297, 590
BstAFI CTTAAG 1 cut(s) 1268
BstAPI GCANNNNNTGC 1 cut(s) 1912
BstC8I GCNNGC 5 cut(s) 430, 432, 1074, 1129, 1524
BstDEI CTNAG 5 cut(s) 1137, 1362, 1466, 1755, 1956
BstDSI CCRYGG 2 cut(s) 1506, 1539
BstEII GGTNACC 1 cut(s) 604
BstENI CCTNNNNNAGG 1 cut(s) 275
BstF5I GGATG 4 cut(s) 369, 567, 1000, 1353
BstH2I RGCGCY 2 cut(s) 264, 284
BstHHI GCGC 9 cut(s) 263, 283, 329, 360, 430, 432, 434, 479, 511
BstKTI GATC 8 cut(s) 342, 567, 614, 942, 1099, 1699, 1761, 1923
BstMAI GTCTC 3 cut(s) 503, 581, 971
BstMBI GATC 8 cut(s) 339, 564, 611, 939, 1096, 1696, 1758, 1920
BstMCI CGRYCG 1 cut(s) 417
BstNI CCWGG 4 cut(s) 293, 347, 474, 1866
BstNSI RCATGY 2 cut(s) 796, 1910
BstPI GGTNACC 1 cut(s) 604
BstSFI CTRYAG 2 cut(s) 1007, 1164
BstSLI GKGCMC 2 cut(s) 555, 1149
BstV1I GCAGC 8 cut(s) 187, 751, 993, 1198, 1432, 1513, 1556, 1792
BstV2I GAAGAC 1 cut(s) 1833
BstX2I RGATCY 4 cut(s) 339, 611, 939, 1758
BstYI RGATCY 4 cut(s) 339, 611, 939, 1758
BstZI CGGCCG 1 cut(s) 414
BsuRI GGCC 9 cut(s) 350, 416, 471, 708, 1061, 1121, 1352, 1471, 1538
BtgI CCRYGG 2 cut(s) 1506, 1539
BtsCI GGATG 4 cut(s) 369, 567, 1000, 1353
BtsIMutI CAGTG 4 cut(s) 303, 823, 1484, 1694
Cac8I GCNNGC 5 cut(s) 430, 432, 1074, 1129, 1524
CfoI GCGC 9 cut(s) 263, 283, 329, 360, 430, 432, 434, 479, 511
Cfr10I RCCGGY 2 cut(s) 868, 1418
Cfr13I GGNCC 6 cut(s) 349, 470, 707, 766, 1536, 1868
Cfr42I CCGCGG 1 cut(s) 1542
CseI GACGC 5 cut(s) 286, 318, 423, 515, 598
Csp6I GTAC 4 cut(s) 824, 954, 1799, 1892
CspAI ACCGGT 2 cut(s) 868, 1418
CspCI CAANNNNNGTGG 2 cut(s) 1608, 1643
CviAII CATG 6 cut(s) 514, 793, 1025, 1193, 1507, 1907
CviQI GTAC 4 cut(s) 824, 954, 1799, 1892
DdeI CTNAG 5 cut(s) 1137, 1362, 1466, 1755, 1956
DinI GGCGCC 1 cut(s) 262
DpnI GATC 8 cut(s) 341, 566, 613, 941, 1098, 1698, 1760, 1922
DpnII GATC 8 cut(s) 339, 564, 611, 939, 1096, 1696, 1758, 1920
EaeI YGGCCR 1 cut(s) 414
EagI CGGCCG 1 cut(s) 414
Eam1104I CTCTTC 2 cut(s) 28, 51
EarI CTCTTC 2 cut(s) 28, 51
EciI GGCGGA 2 cut(s) 113, 1310
Ecl136II GAGCTC 1 cut(s) 984
EclXI CGGCCG 1 cut(s) 414
Eco130I CCWWGG 1 cut(s) 1506
Eco147I AGGCCT 2 cut(s) 1121, 1471
Eco24I GRGCYC 3 cut(s) 252, 986, 1723
Eco31I GGTCTC 2 cut(s) 503, 971
Eco47I GGWCC 2 cut(s) 766, 1868
Eco52I CGGCCG 1 cut(s) 414
Eco53kI GAGCTC 1 cut(s) 984
Eco57I CTGAAG 1 cut(s) 1416
Eco88I CYCGRG 3 cut(s) 901, 968, 979
Eco91I GGTNACC 1 cut(s) 604
EcoICRI GAGCTC 1 cut(s) 984
EcoNI CCTNNNNNAGG 1 cut(s) 275
EcoO109I RGGNCCY 1 cut(s) 349
EcoO65I GGTNACC 1 cut(s) 604
EcoRII CCWGG 4 cut(s) 291, 345, 472, 1864
EcoT14I CCWWGG 1 cut(s) 1506
EcoT22I ATGCAT 2 cut(s) 458, 1026
EcoT38I GRGCYC 3 cut(s) 252, 986, 1723
EgeI GGCGCC 1 cut(s) 262
EheI GGCGCC 1 cut(s) 262
ErhI CCWWGG 1 cut(s) 1506
Esp3I CGTCTC 1 cut(s) 581
FaeI CATG 6 cut(s) 517, 796, 1028, 1196, 1510, 1910
FalI AAGNNNNNCTT 2 cut(s) 1049, 1081
FaqI GGGAC 3 cut(s) 779, 985, 1042
FatI CATG 6 cut(s) 513, 792, 1024, 1192, 1506, 1906
FauI CCCGC 2 cut(s) 395, 563
FblI GTMKAC 2 cut(s) 700, 1569
FokI GGATG 4 cut(s) 356, 574, 1007, 1340
FriOI GRGCYC 3 cut(s) 252, 986, 1723
FspBI CTAG 4 cut(s) 686, 798, 951, 1128
GlaI GCGC 9 cut(s) 262, 282, 328, 359, 429, 431, 433, 478, 510
GsaI CCCAGC 2 cut(s) 218, 1745
GsuI CTGGAG 3 cut(s) 192, 851, 1136
HaeII RGCGCY 2 cut(s) 264, 284
HaeIII GGCC 9 cut(s) 350, 416, 471, 708, 1061, 1121, 1352, 1471, 1538
HgaI GACGC 5 cut(s) 286, 318, 423, 515, 598
HhaI GCGC 9 cut(s) 263, 283, 329, 360, 430, 432, 434, 479, 511
Hin1I GRCGYC 3 cut(s) 261, 297, 590
Hin1II CATG 6 cut(s) 517, 796, 1028, 1196, 1510, 1910
Hin6I GCGC 9 cut(s) 261, 281, 327, 358, 428, 430, 432, 477, 509
HinP1I GCGC 9 cut(s) 261, 281, 327, 358, 428, 430, 432, 477, 509
HincII GTYRAC 4 cut(s) 783, 1392, 1485, 1570
HindII GTYRAC 4 cut(s) 783, 1392, 1485, 1570
HindIII AAGCTT 3 cut(s) 1265, 1271, 1788
HinfI GANTC 4 cut(s) 857, 1160, 1633, 1751
HpaI GTTAAC 2 cut(s) 783, 1392
HphI GGTGA 9 cut(s) 92, 142, 169, 292, 532, 610, 1220, 1592, 1973
Hpy166II GTNNAC 7 cut(s) 701, 783, 1054, 1147, 1392, 1485, 1570
Hpy188I TCNGA 6 cut(s) 528, 569, 856, 988, 1437, 1756
Hpy8I GTNNAC 7 cut(s) 701, 783, 1054, 1147, 1392, 1485, 1570
Hpy99I CGWCG 4 cut(s) 248, 334, 439, 509
HpyAV CCTTC 5 cut(s) 40, 51, 1391, 1396, 1816
HpyCH4III ACNGT 3 cut(s) 307, 1033, 1479
HpyCH4IV ACGT 2 cut(s) 378, 1884
HpyCH4V TGCA 6 cut(s) 456, 739, 1009, 1024, 1147, 1166
HpyF3I CTNAG 5 cut(s) 1137, 1362, 1466, 1755, 1956
HpySE526I ACGT 2 cut(s) 378, 1884
Hsp92I GRCGYC 3 cut(s) 261, 297, 590
Hsp92II CATG 6 cut(s) 517, 796, 1028, 1196, 1510, 1910
HspAI GCGC 9 cut(s) 261, 281, 327, 358, 428, 430, 432, 477, 509
KasI GGCGCC 1 cut(s) 260
Kpn2I TCCGGA 1 cut(s) 757
KpnI GGTACC 1 cut(s) 1802
KspAI GTTAAC 2 cut(s) 783, 1392
KspI CCGCGG 1 cut(s) 1542
Kzo9I GATC 8 cut(s) 339, 564, 611, 939, 1096, 1696, 1758, 1920
LmnI GCTCC 8 cut(s) 19, 208, 365, 832, 928, 989, 1297, 1502
Lsp1109I GCAGC 8 cut(s) 187, 751, 993, 1198, 1432, 1513, 1556, 1792
LweI GCATC 4 cut(s) 227, 565, 1002, 1546
MaeI CTAG 4 cut(s) 686, 798, 951, 1128
MaeII ACGT 2 cut(s) 378, 1884
MalI GATC 8 cut(s) 341, 566, 613, 941, 1098, 1698, 1760, 1922
MauBI CGCGCGCG 2 cut(s) 428, 430
MboI GATC 8 cut(s) 339, 564, 611, 939, 1096, 1696, 1758, 1920
MboII GAAGA 8 cut(s) 15, 38, 1189, 1628, 1753, 1831, 1838, 1980
MflI RGATCY 4 cut(s) 339, 611, 939, 1758
MhlI GDGCHC 5 cut(s) 252, 555, 986, 1149, 1723
MluCI AATT 7 cut(s) 225, 628, 663, 1256, 1313, 1610, 1647
Mly113I GGCGCC 1 cut(s) 261
MlyI GAGTC 2 cut(s) 866, 1760
MmeI TCCRAC 4 cut(s) 165, 834, 1836, 1860
Mph1103I ATGCAT 2 cut(s) 458, 1026
MroI TCCGGA 1 cut(s) 757
MseI TTAA 4 cut(s) 669, 782, 1269, 1391
MslI CAYNNNNRTG 2 cut(s) 305, 527
MspA1I CMGCKG 5 cut(s) 200, 495, 1526, 1541, 1805
MspCI CTTAAG 1 cut(s) 1268
Mva1269I GAATGC 2 cut(s) 522, 1026
MvaI CCWGG 4 cut(s) 293, 347, 474, 1866
NarI GGCGCC 1 cut(s) 261
NciI CCSGG 6 cut(s) 321, 447, 705, 710, 944, 1133
NcoI CCATGG 1 cut(s) 1506
NdeII GATC 8 cut(s) 339, 564, 611, 939, 1096, 1696, 1758, 1920
NheI GCTAGC 1 cut(s) 1127
NlaIII CATG 6 cut(s) 517, 796, 1028, 1196, 1510, 1910
NlaIV GGNNCC 8 cut(s) 262, 571, 756, 767, 941, 1504, 1537, 1800
NmeAIII GCCGAG 1 cut(s) 442
NmuCI GTSAC 4 cut(s) 175, 298, 1102, 1813
NsiI ATGCAT 2 cut(s) 458, 1026
NspI RCATGY 2 cut(s) 796, 1910
OliI CACNNNNGTG 1 cut(s) 305
PaeR7I CTCGAG 1 cut(s) 901
PauI GCGCGC 2 cut(s) 428, 430
PceI AGGCCT 2 cut(s) 1121, 1471
PciI ACATGT 1 cut(s) 792
PctI GAATGC 2 cut(s) 522, 1026
PfeI GAWTC 2 cut(s) 1160, 1633
PflMI CCANNNNNTGG 2 cut(s) 1612, 1931
PinAI ACCGGT 2 cut(s) 868, 1418
PleI GAGTC 2 cut(s) 865, 1759
PluTI GGCGCC 1 cut(s) 264
PpsI GAGTC 2 cut(s) 865, 1759
PscI ACATGT 1 cut(s) 792
PsiI TTATAA 1 cut(s) 1412
Psp124BI GAGCTC 1 cut(s) 986
Psp6I CCWGG 4 cut(s) 291, 345, 472, 1864
PspEI GGTNACC 1 cut(s) 604
PspFI CCCAGC 2 cut(s) 214, 1741
PspGI CCWGG 4 cut(s) 291, 345, 472, 1864
PspN4I GGNNCC 8 cut(s) 262, 571, 756, 767, 941, 1504, 1537, 1800
PspPI GGNCC 6 cut(s) 349, 470, 707, 766, 1536, 1868
PspXI VCTCGAGB 1 cut(s) 901
PstI CTGCAG 2 cut(s) 1011, 1168
PsuI RGATCY 4 cut(s) 339, 611, 939, 1758
PteI GCGCGC 2 cut(s) 428, 430
PvuII CAGCTG 2 cut(s) 1526, 1805
RsaI GTAC 4 cut(s) 825, 955, 1800, 1893
RsaNI GTAC 4 cut(s) 824, 954, 1799, 1892
RseI CAYNNNNRTG 2 cut(s) 305, 527
SacI GAGCTC 1 cut(s) 986
SacII CCGCGG 1 cut(s) 1542
SalI GTCGAC 1 cut(s) 1568
SaqAI TTAA 4 cut(s) 669, 782, 1269, 1391
Sau3AI GATC 8 cut(s) 339, 564, 611, 939, 1096, 1696, 1758, 1920
Sau96I GGNCC 6 cut(s) 349, 470, 707, 766, 1536, 1868
ScaI AGTACT 1 cut(s) 955
SchI GAGTC 2 cut(s) 866, 1760
SduI GDGCHC 5 cut(s) 252, 555, 986, 1149, 1723
SfaNI GCATC 4 cut(s) 227, 565, 1002, 1546
SfcI CTRYAG 2 cut(s) 1007, 1164
SfoI GGCGCC 1 cut(s) 262
Sfr274I CTCGAG 1 cut(s) 901
Sfr303I CCGCGG 1 cut(s) 1542
SgrAI CRCCGGYG 1 cut(s) 1418
SgrBI CCGCGG 1 cut(s) 1542
SinI GGWCC 2 cut(s) 766, 1868
SlaI CTCGAG 1 cut(s) 901
SmiMI CAYNNNNRTG 2 cut(s) 305, 527
SmlI CTYRAG 2 cut(s) 901, 1268
SmoI CTYRAG 2 cut(s) 901, 1268
SpeI ACTAGT 1 cut(s) 950
Sse9I AATT 7 cut(s) 225, 628, 663, 1256, 1313, 1610, 1647
SseBI AGGCCT 2 cut(s) 1121, 1471
SspDI GGCGCC 1 cut(s) 260
SspMI CTAG 4 cut(s) 686, 798, 951, 1128
SstI GAGCTC 1 cut(s) 986
StuI AGGCCT 2 cut(s) 1121, 1471
StyI CCWWGG 1 cut(s) 1506
TaaI ACNGT 3 cut(s) 307, 1033, 1479
TaiI ACGT 2 cut(s) 381, 1887
TaqI TCGA 5 cut(s) 285, 332, 902, 1474, 1569
TasI AATT 7 cut(s) 225, 628, 663, 1256, 1313, 1610, 1647
TatI WGTACW 1 cut(s) 953
TauI GCSGC 6 cut(s) 164, 327, 416, 1541, 1544, 1841
TfiI GAWTC 2 cut(s) 1160, 1633
Tru1I TTAA 4 cut(s) 669, 782, 1269, 1391
Tru9I TTAA 4 cut(s) 669, 782, 1269, 1391
TscAI CASTG 4 cut(s) 310, 823, 1484, 1694
TseFI GTSAC 4 cut(s) 175, 298, 1102, 1813
TseI GCWGC 8 cut(s) 200, 739, 1006, 1186, 1445, 1526, 1544, 1805
Tsp45I GTSAC 4 cut(s) 175, 298, 1102, 1813
TspDTI ATGAA 1 cut(s) 1613
TspRI CASTG 4 cut(s) 310, 823, 1484, 1694
Van91I CCANNNNNTGG 2 cut(s) 1612, 1931
Vha464I CTTAAG 1 cut(s) 1268
VneI GTGCAC 1 cut(s) 1145
VpaK11BI GGWCC 2 cut(s) 766, 1868
XagI CCTNNNNNAGG 1 cut(s) 275
XapI RAATTY 1 cut(s) 1647
XceI RCATGY 2 cut(s) 796, 1910
XhoI CTCGAG 1 cut(s) 901
XmiI GTMKAC 2 cut(s) 700, 1569
XspI CTAG 4 cut(s) 686, 798, 951, 1128
ZrmI AGTACT 1 cut(s) 955
Zsp2I ATGCAT 2 cut(s) 458, 1026
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.