RorugMtG0001400

One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000009
OG0022044
Physical Location & Seq
Forward (+)
90530 .. 92365
1836 bp
Loading structure...
UTR
Exon/CDS
Intron
RorugMtG0001400.1

Sequence Viewer

Length: 1836 bp
ATGATGGGAGTTGCTGGGGTGTTGGGCGCTGCTCTGTTATGCGCTATTCATGGTGCTACCGTAGAAAAGACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCCCAAATCTTTTTGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCCCTGACCCTACGTGCCTATGACTTCGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAAGATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACTTATATTCCCTGAGGAGGTTCTGCCGCGTGGAAACGCTCTTTAATGGAACTTTAGCTTTAGCTGGTCGCGACCAAGAAACCACCGGTTTCGCTTGGTGGTCCGGGAATGCTAGACTTATCAATTTATCCGGTAAACTACTGGGGGCTCATGTCGCCCATGCCGGATTAATTGTATTCTGGGCCGGAGCAATGAACCTATTTGAAGTGGCTCATTTCGTACCAGAGAAGCCTATGTATGAACAAGGATTAATTTTACTTCCCCACCTAGCTACTCTAGGTTGGGGGGTAGGTCCGGGTGGGGAAGTTCTAGACACCTTTCCATACTTTGTGTCTGGGGTACTTCACTTAATTTCCTCTGCAGTATTGGGCTTTGTCGGTATTTATCATGCACTTCTGGGACCCGAGACTCTTGAAGAATCTTTTCCATTCTTCGGTTATGTATGGAAAGATAGAAATAAAATGACTACTATTTTGGGTATTCACCTAATCTTGTTAGGCATAAGTGCTTTTCTTCTAGTATTCAAGGCTCTTTATTTTGGGGGTGTATATGATACCTGGGCTCCGGGTGGGGGAGATGTAAGAAAAATTACCAACCTGACCCTTAGCCCAAGTATTGTATTTGGTTATTTACTAAAATCCCCCTTTGGCGGAGAAGAGTGGATCGTTAGTGTGGACGATTTGGAAGATATAATCGGAGGGCATGTATGGTTAGGTTCCATTTGTATACTTGGTGGAATCTGGCATATCTTAACCAAACCTTTTGCATGGGCTCGCCGTGCACTTGTATGGTCTGGAGAGGCTTACCTATCTTATAGTTTAGCCGCTTTATATGTTTTTGGTTTTATTGCTTGTTGCTTTGTTTGGTTCAATAATACCGCCTATCCTAGTGAGTTTTACGGGCCCGCTGGACCCGAAGCTTCTCAAGCTCAAGCGTTTACTTTTTTGGTTAGAGACCAACGTCTTGGGGCTAACGTAGGATCTGCTCAAGGACCTACCGGTTTAGGTAAATATCTAATGCGTTCTCCGACTGGGGAAGTTCTTTTTGGAGGAGAAACGCATAGTTTCTGGGATCTGCGTGCTCCCTGGTTAGAACCTCTAAGGGGTCCTAATGGTTTGGACTTGAGTAGGCTGAAAAAAGACATACAGCCTTGGCAAGAGCGGCGTTCTGCGGAATATATGACCCATGCTCCTTTAGGTTCTTTAAATTCCGTGGGTGGCGTAGCTACCGAGATCAATGCAGTCAATTATGTCTCTCCTAGAAGTTGGTTAGCTACTTCTCATTTTGTTCTAGGATTCTTCCTATTCGTGGGGCATTTATGGCATGCGGGAAGGGCTCGTGCAGCTGCTGCCGGATTTGAAAAAGGAATTGATCGTGATTTTGAACCTGTTCTTTCCATGACTCCTCTTAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00195 ko01100 map00195 map01100
Pfam Domains
Protein Families
PsbK

Protein Analysis

611

Amino Acids

67.39

Weight (kDa)

6.03

Isoelectric Point (pI)

38.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Photo_RC PF00124 1 - 120 8.3e-21 Photosynthetic reaction centre protein
PSII PF00421 169 - 607 7e-126 Photosystem II protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0022044)

Species Orthologous Gene IDs
arabidopsis_thaliana ATCG00070
malus_domestica MD03G1146700.v1.1
rosa_chinensis RchiOBHm_CPg0502501
rosa_rugosa RorugMtG0001400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 1582
AccI GTMKAC 1 cut(s) 1147
AccII CGCG 2 cut(s) 450, 492
AclI AACGTT 1 cut(s) 202
AclWI GGATC 4 cut(s) 326, 1091, 1408, 1500
AcsI RAATTY 2 cut(s) 338, 1627
AcuI CTGAAG 1 cut(s) 150
AfaI GTAC 3 cut(s) 231, 642, 762
AfiI CCNNNNNNNGG 9 cut(s) 239, 246, 325, 438, 854, 992, 1070, 1523, 1729
AgeI ACCGGT 3 cut(s) 239, 506, 1418
AgsI TTSAA 8 cut(s) 80, 144, 626, 836, 946, 1291, 1781, 1805
AjnI CCWGG 2 cut(s) 977, 1505
AjuI GAANNNNNNNTTGG 2 cut(s) 1449, 1481
AluBI AGCT 9 cut(s) 128, 479, 485, 692, 1340, 1349, 1646, 1694, 1766
AluI AGCT 9 cut(s) 128, 479, 485, 692, 1340, 1349, 1646, 1694, 1766
Alw21I GWGCWC 3 cut(s) 259, 1204, 1504
Alw26I GTCTC 4 cut(s) 338, 821, 1368, 1678
Alw44I GTGCAC 1 cut(s) 1200
AlwI GGATC 4 cut(s) 326, 1091, 1408, 1500
AlwNI CAGNNNCTG 1 cut(s) 1769
Ama87I CYCGRG 1 cut(s) 824
AoxI GGCC 2 cut(s) 603, 1322
ApaI GGGCCC 1 cut(s) 1326
ApaLI GTGCAC 1 cut(s) 1200
ApeKI GCWGC 5 cut(s) 29, 323, 1763, 1766, 1769
ApoI RAATTY 2 cut(s) 338, 1627
ArsI GACNNNNNNTTYG 2 cut(s) 877, 909
AseI ATTAAT 2 cut(s) 590, 671
AsiGI ACCGGT 3 cut(s) 239, 506, 1418
Asp700I GAANNNNTTC 3 cut(s) 381, 843, 1809
AspLEI GCGC 2 cut(s) 29, 44
AsuC2I CCSGG 3 cut(s) 526, 717, 987
AsuHPI GGTGA 3 cut(s) 98, 142, 896
AvaI CYCGRG 1 cut(s) 824
AvaII GGWCC 7 cut(s) 168, 522, 713, 821, 1331, 1412, 1526
AxyI CCTNAGG 1 cut(s) 434
BaeGI GKGCMC 2 cut(s) 1204, 1326
BanII GRGCYC 5 cut(s) 571, 985, 1195, 1326, 1759
BauI CACGAG 1 cut(s) 1758
Bbv12I GWGCWC 3 cut(s) 259, 1204, 1504
BbvI GCAGC 5 cut(s) 16, 335, 1753, 1756, 1775
BccI CCATC 3 cut(s) 77, 83, 388
BceAI ACGGC 1 cut(s) 1182
BcgI CGANNNNNNTGC 2 cut(s) 1640, 1674
BciT130I CCWGG 2 cut(s) 979, 1507
BcnI CCSGG 3 cut(s) 526, 717, 987
BcoDI GTCTC 4 cut(s) 338, 821, 1368, 1678
BfaI CTAG 9 cut(s) 275, 534, 689, 698, 731, 938, 1308, 1680, 1712
BfmI CTRYAG 1 cut(s) 780
BfoI RGCGCY 1 cut(s) 30
BisI GCNGC 9 cut(s) 30, 324, 399, 448, 1245, 1583, 1764, 1767, 1770
BlsI GCNGC 9 cut(s) 31, 325, 400, 449, 1246, 1584, 1765, 1768, 1771
Bme1390I CCNGG 5 cut(s) 526, 717, 979, 987, 1507
Bme18I GGWCC 7 cut(s) 168, 522, 713, 821, 1331, 1412, 1526
BmeT110I CYCGRG 1 cut(s) 824
BmiI GGNNCC 8 cut(s) 170, 822, 823, 984, 1138, 1324, 1333, 1527
BmrFI CCNGG 5 cut(s) 526, 717, 979, 987, 1507
BmrI ACTGGG 2 cut(s) 572, 1461
BmuI ACTGGG 2 cut(s) 572, 1461
BoxI GACNNNNGTC 1 cut(s) 1380
BpmI CTGGAG 1 cut(s) 1236
Bpu10I CCTNAGC 1 cut(s) 1025
BpuEI CTTGAG 6 cut(s) 108, 387, 1329, 1335, 1392, 1564
BpuMI CCSGG 3 cut(s) 526, 717, 987
BsaAI YACGTR 1 cut(s) 290
BsaI GGTCTC 1 cut(s) 1368
BsaJI CCNNGG 4 cut(s) 978, 1505, 1571, 1632
BsaWI WCCGGW 4 cut(s) 239, 506, 551, 1418
BsaXI ACNNNNNCTCC 6 cut(s) 967, 997, 1110, 1140, 1594, 1624
Bsc4I CCNNNNNNNGG 9 cut(s) 239, 246, 325, 438, 854, 992, 1070, 1523, 1729
Bse118I RCCGGY 3 cut(s) 239, 506, 1418
Bse1I ACTGG 3 cut(s) 233, 567, 1456
Bse21I CCTNAGG 1 cut(s) 434
Bse3DI GCAATG 1 cut(s) 618
BseBI CCWGG 2 cut(s) 979, 1507
BseDI CCNNGG 4 cut(s) 978, 1505, 1571, 1632
BseGI GGATG 2 cut(s) 255, 399
BseLI CCNNNNNNNGG 9 cut(s) 239, 246, 325, 438, 854, 992, 1070, 1523, 1729
BseMI GCAATG 1 cut(s) 618
BseMII CTCAG 2 cut(s) 323, 425
BseNI ACTGG 3 cut(s) 233, 567, 1456
BseRI GAGGAG 3 cut(s) 451, 1485, 1815
BseSI GKGCMC 2 cut(s) 1204, 1326
BseXI GCAGC 5 cut(s) 16, 335, 1753, 1756, 1775
BseYI CCCAGC 1 cut(s) 14
BsgI GTGCAG 2 cut(s) 342, 1782
Bsh1236I CGCG 2 cut(s) 450, 492
BshFI GGCC 2 cut(s) 605, 1324
BshTI ACCGGT 3 cut(s) 239, 506, 1418
BsiHKAI GWGCWC 3 cut(s) 259, 1204, 1504
BsiHKCI CYCGRG 1 cut(s) 824
BslFI GGGAC 2 cut(s) 154, 834
BslI CCNNNNNNNGG 9 cut(s) 239, 246, 325, 438, 854, 992, 1070, 1523, 1729
BsmAI GTCTC 4 cut(s) 338, 821, 1368, 1678
BsmFI GGGAC 2 cut(s) 154, 834
BsmI GAATGC 1 cut(s) 535
BsnI GGCC 2 cut(s) 605, 1324
Bso31I GGTCTC 1 cut(s) 1368
BsoBI CYCGRG 1 cut(s) 824
Bsp120I GGGCCC 1 cut(s) 1322
Bsp1286I GDGCHC 8 cut(s) 259, 571, 985, 1195, 1204, 1326, 1504, 1759
Bsp143I GATC 7 cut(s) 331, 406, 1083, 1400, 1492, 1653, 1792
Bsp68I TCGCGA 1 cut(s) 492
BspANI GGCC 2 cut(s) 605, 1324
BspCNI CTCAG 2 cut(s) 322, 426
BspFNI CGCG 2 cut(s) 450, 492
BspHI TCATGA 1 cut(s) 415
BspLI GGNNCC 8 cut(s) 170, 822, 823, 984, 1138, 1324, 1333, 1527
BspMAI CTGCAG 1 cut(s) 784
BspPI GGATC 4 cut(s) 326, 1091, 1408, 1500
BspTNI GGTCTC 1 cut(s) 1368
BsrBI CCGCTC 1 cut(s) 1582
BsrDI GCAATG 1 cut(s) 618
BsrFI RCCGGY 3 cut(s) 239, 506, 1418
BsrI ACTGG 3 cut(s) 233, 567, 1456
BssAI RCCGGY 3 cut(s) 239, 506, 1418
BssECI CCNNGG 4 cut(s) 978, 1505, 1571, 1632
BssMI GATC 7 cut(s) 331, 406, 1083, 1400, 1492, 1653, 1792
BssNAI GTATAC 1 cut(s) 1148
BssSI CACGAG 1 cut(s) 1758
BssT1I CCWWGG 1 cut(s) 1571
Bst1107I GTATAC 1 cut(s) 1148
Bst2BI CACGAG 1 cut(s) 1758
Bst2UI CCWGG 2 cut(s) 979, 1507
Bst4CI ACNGT 1 cut(s) 61
Bst6I CTCTTC 1 cut(s) 1071
BstAPI GCANNNNNTGC 1 cut(s) 1769
BstBAI YACGTR 1 cut(s) 290
BstC8I GCNNGC 4 cut(s) 1195, 1326, 1500, 1746
BstDEI CTNAG 4 cut(s) 309, 434, 1025, 1520
BstDSI CCRYGG 1 cut(s) 1632
BstEII GGTNACC 1 cut(s) 148
BstF5I GGATG 2 cut(s) 255, 399
BstFNI CGCG 2 cut(s) 450, 492
BstH2I RGCGCY 1 cut(s) 30
BstHHI GCGC 2 cut(s) 29, 44
BstKTI GATC 7 cut(s) 334, 409, 1086, 1403, 1495, 1656, 1795
BstMAI GTCTC 4 cut(s) 338, 821, 1368, 1678
BstMBI GATC 7 cut(s) 331, 406, 1083, 1400, 1492, 1653, 1792
BstMWI GCNNNNNNNGC 9 cut(s) 395, 575, 1199, 1346, 1582, 1741, 1754, 1763, 1769
BstNI CCWGG 2 cut(s) 979, 1507
BstNSI RCATGY 2 cut(s) 1127, 1748
BstPAI GACNNNNGTC 1 cut(s) 1380
BstPI GGTNACC 1 cut(s) 148
BstSCI CCNGG 5 cut(s) 524, 715, 977, 985, 1505
BstSFI CTRYAG 1 cut(s) 780
BstSLI GKGCMC 2 cut(s) 1204, 1326
BstUI CGCG 2 cut(s) 450, 492
BstV1I GCAGC 5 cut(s) 16, 335, 1753, 1756, 1775
BstX2I RGATCY 3 cut(s) 331, 1400, 1492
BstXI CCANNNNNNTGG 1 cut(s) 1385
BstYI RGATCY 3 cut(s) 331, 1400, 1492
BstZ17I GTATAC 1 cut(s) 1148
Bsu36I CCTNAGG 1 cut(s) 434
BsuRI GGCC 2 cut(s) 605, 1324
BtgI CCRYGG 1 cut(s) 1632
BtsCI GGATG 2 cut(s) 255, 399
BtuMI TCGCGA 1 cut(s) 492
Cac8I GCNNGC 4 cut(s) 1195, 1326, 1500, 1746
CaiI CAGNNNCTG 1 cut(s) 1769
CciI TCATGA 1 cut(s) 415
CfoI GCGC 2 cut(s) 29, 44
Cfr10I RCCGGY 3 cut(s) 239, 506, 1418
Csp6I GTAC 3 cut(s) 230, 641, 761
CspAI ACCGGT 3 cut(s) 239, 506, 1418
CviQI GTAC 3 cut(s) 230, 641, 761
DdeI CTNAG 4 cut(s) 309, 434, 1025, 1520
DpnI GATC 7 cut(s) 333, 408, 1085, 1402, 1494, 1655, 1794
DpnII GATC 7 cut(s) 331, 406, 1083, 1400, 1492, 1653, 1792
DraI TTTAAA 1 cut(s) 1626
Eam1104I CTCTTC 1 cut(s) 1071
EarI CTCTTC 1 cut(s) 1071
EciI GGCGGA 1 cut(s) 1086
Eco130I CCWWGG 1 cut(s) 1571
Eco24I GRGCYC 5 cut(s) 571, 985, 1195, 1326, 1759
Eco31I GGTCTC 1 cut(s) 1368
Eco47I GGWCC 7 cut(s) 168, 522, 713, 821, 1331, 1412, 1526
Eco57I CTGAAG 1 cut(s) 150
Eco81I CCTNAGG 1 cut(s) 434
Eco88I CYCGRG 1 cut(s) 824
Eco91I GGTNACC 1 cut(s) 148
EcoO109I RGGNCCY 3 cut(s) 821, 1412, 1526
EcoO65I GGTNACC 1 cut(s) 148
EcoRII CCWGG 2 cut(s) 977, 1505
EcoT14I CCWWGG 1 cut(s) 1571
EcoT38I GRGCYC 5 cut(s) 571, 985, 1195, 1326, 1759
ErhI CCWWGG 1 cut(s) 1571
FalI AAGNNNNNCTT 2 cut(s) 353, 385
FaqI GGGAC 2 cut(s) 154, 834
FauI CCCGC 2 cut(s) 1333, 1741
FblI GTMKAC 1 cut(s) 1147
Fnu4HI GCNGC 9 cut(s) 30, 324, 399, 448, 1245, 1583, 1764, 1767, 1770
FokI GGATG 2 cut(s) 262, 406
FriOI GRGCYC 5 cut(s) 571, 985, 1195, 1326, 1759
Fsp4HI GCNGC 9 cut(s) 30, 324, 399, 448, 1245, 1583, 1764, 1767, 1770
FspBI CTAG 9 cut(s) 275, 534, 689, 698, 731, 938, 1308, 1680, 1712
GlaI GCGC 2 cut(s) 28, 43
GluI GCNGC 9 cut(s) 30, 324, 399, 448, 1245, 1583, 1764, 1767, 1770
GsaI CCCAGC 1 cut(s) 18
GsuI CTGGAG 1 cut(s) 1236
HaeII RGCGCY 1 cut(s) 30
HaeIII GGCC 2 cut(s) 605, 1324
HhaI GCGC 2 cut(s) 29, 44
Hin6I GCGC 2 cut(s) 27, 42
HinP1I GCGC 2 cut(s) 27, 42
HindIII AAGCTT 1 cut(s) 1338
HinfI GANTC 6 cut(s) 364, 829, 839, 1158, 1716, 1822
HphI GGTGA 3 cut(s) 98, 142, 896
Hpy166II GTNNAC 5 cut(s) 557, 1096, 1148, 1202, 1359
Hpy188I TCNGA 2 cut(s) 1118, 1449
Hpy188III TCNNGA 9 cut(s) 311, 335, 404, 416, 491, 731, 833, 1215, 1796
Hpy8I GTNNAC 5 cut(s) 557, 1096, 1148, 1202, 1359
HpyAV CCTTC 2 cut(s) 371, 1746
HpyCH4III ACNGT 1 cut(s) 61
HpyCH4IV ACGT 4 cut(s) 202, 289, 1381, 1395
HpyCH4V TGCA 8 cut(s) 95, 323, 782, 812, 1187, 1202, 1661, 1763
HpyF10VI GCNNNNNNNGC 9 cut(s) 395, 575, 1199, 1346, 1582, 1741, 1754, 1763, 1769
HpyF3I CTNAG 4 cut(s) 309, 434, 1025, 1520
HpySE526I ACGT 4 cut(s) 202, 289, 1381, 1395
HspAI GCGC 2 cut(s) 27, 42
KflI GGGWCCC 1 cut(s) 821
Kzo9I GATC 7 cut(s) 331, 406, 1083, 1400, 1492, 1653, 1792
LmnI GCTCC 4 cut(s) 608, 988, 1507, 1615
Lsp1109I GCAGC 5 cut(s) 16, 335, 1753, 1756, 1775
MaeI CTAG 9 cut(s) 275, 534, 689, 698, 731, 938, 1308, 1680, 1712
MaeII ACGT 4 cut(s) 202, 289, 1381, 1395
MaeIII GTNAC 3 cut(s) 148, 207, 235
MalI GATC 7 cut(s) 333, 408, 1085, 1402, 1494, 1655, 1794
MbiI CCGCTC 1 cut(s) 1582
MboI GATC 7 cut(s) 331, 406, 1083, 1400, 1492, 1653, 1792
MboII GAAGA 9 cut(s) 92, 143, 341, 844, 848, 926, 1088, 1118, 1711
MflI RGATCY 3 cut(s) 331, 1400, 1492
MhlI GDGCHC 8 cut(s) 259, 571, 985, 1195, 1204, 1326, 1504, 1759
MluCI AATT 9 cut(s) 338, 544, 591, 672, 771, 1008, 1627, 1666, 1788
MlyI GAGTC 2 cut(s) 823, 1816
MmeI TCCRAC 1 cut(s) 1472
MnlI CCTC 9 cut(s) 423, 429, 432, 787, 1112, 1213, 1463, 1527, 1836
MroXI GAANNNNTTC 3 cut(s) 381, 843, 1809
MseI TTAA 9 cut(s) 114, 371, 465, 590, 671, 770, 1172, 1625, 1830
MslI CAYNNNNRTG 1 cut(s) 1207
MspA1I CMGCKG 3 cut(s) 326, 1328, 1766
MspR9I CCNGG 5 cut(s) 526, 717, 979, 987, 1507
Mva1269I GAATGC 1 cut(s) 535
MvaI CCWGG 2 cut(s) 979, 1507
MvnI CGCG 2 cut(s) 450, 492
MwoI GCNNNNNNNGC 9 cut(s) 395, 575, 1199, 1346, 1582, 1741, 1754, 1763, 1769
NciI CCSGG 3 cut(s) 526, 717, 987
NdeII GATC 7 cut(s) 331, 406, 1083, 1400, 1492, 1653, 1792
NlaIV GGNNCC 8 cut(s) 170, 822, 823, 984, 1138, 1324, 1333, 1527
NmuCI GTSAC 1 cut(s) 148
NruI TCGCGA 1 cut(s) 492
NspI RCATGY 2 cut(s) 1127, 1748
PaeI GCATGC 1 cut(s) 1748
PagI TCATGA 1 cut(s) 415
PctI GAATGC 1 cut(s) 535
PdmI GAANNNNTTC 3 cut(s) 381, 843, 1809
PfeI GAWTC 4 cut(s) 364, 839, 1158, 1716
PfoI TCCNGGA 1 cut(s) 524
PinAI ACCGGT 3 cut(s) 239, 506, 1418
PkrI GCNGC 9 cut(s) 31, 325, 400, 449, 1246, 1584, 1765, 1768, 1771
PleI GAGTC 2 cut(s) 823, 1816
PpsI GAGTC 2 cut(s) 823, 1816
Ppu21I YACGTR 1 cut(s) 290
PpuMI RGGWCCY 3 cut(s) 821, 1412, 1526
PshAI GACNNNNGTC 1 cut(s) 1380
PshBI ATTAAT 2 cut(s) 590, 671
Psp1406I AACGTT 1 cut(s) 202
Psp5II RGGWCCY 3 cut(s) 821, 1412, 1526
Psp6I CCWGG 2 cut(s) 977, 1505
PspEI GGTNACC 1 cut(s) 148
PspFI CCCAGC 1 cut(s) 14
PspGI CCWGG 2 cut(s) 977, 1505
PspN4I GGNNCC 8 cut(s) 170, 822, 823, 984, 1138, 1324, 1333, 1527
PspOMI GGGCCC 1 cut(s) 1322
PspPPI RGGWCCY 3 cut(s) 821, 1412, 1526
PstI CTGCAG 1 cut(s) 784
PstNI CAGNNNCTG 1 cut(s) 1769
PsuI RGATCY 3 cut(s) 331, 1400, 1492
PvuII CAGCTG 1 cut(s) 1766
RruI TCGCGA 1 cut(s) 492
RsaI GTAC 3 cut(s) 231, 642, 762
RsaNI GTAC 3 cut(s) 230, 641, 761
RseI CAYNNNNRTG 1 cut(s) 1207
SaqAI TTAA 9 cut(s) 114, 371, 465, 590, 671, 770, 1172, 1625, 1830
SatI GCNGC 9 cut(s) 30, 324, 399, 448, 1245, 1583, 1764, 1767, 1770
Sau3AI GATC 7 cut(s) 331, 406, 1083, 1400, 1492, 1653, 1792
SchI GAGTC 2 cut(s) 823, 1816
ScrFI CCNGG 5 cut(s) 526, 717, 979, 987, 1507
SduI GDGCHC 8 cut(s) 259, 571, 985, 1195, 1204, 1326, 1504, 1759
SfcI CTRYAG 1 cut(s) 780
SinI GGWCC 7 cut(s) 168, 522, 713, 821, 1331, 1412, 1526
SmiMI CAYNNNNRTG 1 cut(s) 1207
SmlI CTYRAG 6 cut(s) 123, 402, 1344, 1350, 1407, 1543
SmoI CTYRAG 6 cut(s) 123, 402, 1344, 1350, 1407, 1543
SphI GCATGC 1 cut(s) 1748
Sse9I AATT 9 cut(s) 338, 544, 591, 672, 771, 1008, 1627, 1666, 1788
SspMI CTAG 9 cut(s) 275, 534, 689, 698, 731, 938, 1308, 1680, 1712
StyD4I CCNGG 5 cut(s) 524, 715, 977, 985, 1505
StyI CCWWGG 1 cut(s) 1571
TaaI ACNGT 1 cut(s) 61
TaiI ACGT 4 cut(s) 205, 292, 1384, 1398
TaqII GACCGA 1 cut(s) 260
TasI AATT 9 cut(s) 338, 544, 591, 672, 771, 1008, 1627, 1666, 1788
TauI GCSGC 4 cut(s) 401, 450, 1247, 1585
TfiI GAWTC 4 cut(s) 364, 839, 1158, 1716
Tru1I TTAA 9 cut(s) 114, 371, 465, 590, 671, 770, 1172, 1625, 1830
Tru9I TTAA 9 cut(s) 114, 371, 465, 590, 671, 770, 1172, 1625, 1830
TseFI GTSAC 1 cut(s) 148
TseI GCWGC 5 cut(s) 29, 323, 1763, 1766, 1769
Tsp45I GTSAC 1 cut(s) 148
TspDTI ATGAA 4 cut(s) 38, 432, 629, 675
TspGWI ACGGA 3 cut(s) 95, 308, 1621
VneI GTGCAC 1 cut(s) 1200
VpaK11BI GGWCC 7 cut(s) 168, 522, 713, 821, 1331, 1412, 1526
VspI ATTAAT 2 cut(s) 590, 671
XapI RAATTY 2 cut(s) 338, 1627
XbaI TCTAGA 1 cut(s) 730
XceI RCATGY 2 cut(s) 1127, 1748
XmiI GTMKAC 1 cut(s) 1147
XmnI GAANNNNTTC 3 cut(s) 381, 843, 1809
XspI CTAG 9 cut(s) 275, 534, 689, 698, 731, 938, 1308, 1680, 1712
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.