Rh1CG291600

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
Physical Location & Seq
Reverse (-)
56460608 .. 56461081
474 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1CG291600.1

Sequence Viewer

Length: 474 bp
ATGAAGTGTTTTTATTTCTACAACAAAGAGAAGAATGATGAACCAAAGACTACCAAGTCTCCTTCTGGTCATTCCACTTCCTCTTTCTTTTCACTTGATCGTGATCCAAGAAGATCAGAGTTTAATTCTCAGGATGTCTCGGAATTTAGCACAACATCCTCTGTCAAATCATTTGCAGCAATGTCTCAAAGACAGAGCAACCTAAGAGAATTCACATGTGCGGAGCTGAAAGCAGCAACAAAGAATTTTAGTCTCTCCCTCATGCTTGGAGAGGGTGGGTTTGGTGGTGTGTATAGGGGTATCATCAGGAGTGCACAAGATCCACATAAGAAGATAGATGTCGCTGTTAAACAACTGAGTAAAAGGGGATTGCAGGCAAGTGTTCTTCTTCTATGTTTGAAAATGATGTTATTCAAACAAGTTTTCTGCATTGTGGTAAAAGTTATAGGTGGATTAATTATGTTAACAAGCTGA

Protein Analysis

157

Amino Acids

17.51

Weight (kDa)

9.66

Isoelectric Point (pI)

51.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0021793)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 55
AciI CCGC 1 cut(s) 221
AclWI GGATC 2 cut(s) 98, 314
AcsI RAATTY 3 cut(s) 143, 209, 244
AflIII ACRYGT 1 cut(s) 215
AgsI TTSAA 2 cut(s) 400, 415
AluBI AGCT 2 cut(s) 226, 471
AluI AGCT 2 cut(s) 226, 471
Alw21I GWGCWC 1 cut(s) 316
Alw26I GTCTC 4 cut(s) 63, 142, 189, 257
Alw44I GTGCAC 1 cut(s) 312
AlwI GGATC 2 cut(s) 98, 314
ApaLI GTGCAC 1 cut(s) 312
ApeKI GCWGC 2 cut(s) 176, 233
ApoI RAATTY 3 cut(s) 143, 209, 244
AseI ATTAAT 1 cut(s) 455
BaeGI GKGCMC 1 cut(s) 316
Bbv12I GWGCWC 1 cut(s) 316
BbvI GCAGC 2 cut(s) 188, 245
BcoDI GTCTC 4 cut(s) 63, 142, 189, 257
BisI GCNGC 2 cut(s) 177, 234
BlsI GCNGC 2 cut(s) 178, 235
BsaBI GATNNNNATC 1 cut(s) 102
BsaXI ACNNNNNCTCC 2 cut(s) 43, 73
Bse3DI GCAATG 1 cut(s) 186
Bse8I GATNNNNATC 1 cut(s) 102
BseGI GGATG 2 cut(s) 139, 155
BseJI GATNNNNATC 1 cut(s) 102
BseMI GCAATG 1 cut(s) 186
BseMII CTCAG 2 cut(s) 143, 347
BseSI GKGCMC 1 cut(s) 316
BseXI GCAGC 2 cut(s) 188, 245
BsiHKAI GWGCWC 1 cut(s) 316
BsmAI GTCTC 4 cut(s) 63, 142, 189, 257
Bsp1286I GDGCHC 1 cut(s) 316
Bsp143I GATC 4 cut(s) 97, 103, 113, 319
BspACI CCGC 1 cut(s) 221
BspCNI CTCAG 2 cut(s) 142, 348
BspPI GGATC 2 cut(s) 98, 314
BsrDI GCAATG 1 cut(s) 186
BssMI GATC 4 cut(s) 97, 103, 113, 319
BstC8I GCNNGC 1 cut(s) 375
BstDEI CTNAG 3 cut(s) 129, 203, 356
BstF5I GGATG 2 cut(s) 139, 155
BstKTI GATC 4 cut(s) 100, 106, 116, 322
BstMAI GTCTC 4 cut(s) 63, 142, 189, 257
BstMBI GATC 4 cut(s) 97, 103, 113, 319
BstNSI RCATGY 1 cut(s) 219
BstSLI GKGCMC 1 cut(s) 316
BstV1I GCAGC 2 cut(s) 188, 245
BstX2I RGATCY 1 cut(s) 319
BstYI RGATCY 1 cut(s) 319
BtsCI GGATG 2 cut(s) 139, 155
Cac8I GCNNGC 1 cut(s) 375
CviAII CATG 2 cut(s) 216, 262
CviJI RGCY 2 cut(s) 226, 471
CviKI_1 RGCY 2 cut(s) 226, 471
DdeI CTNAG 3 cut(s) 129, 203, 356
DpnI GATC 4 cut(s) 99, 105, 115, 321
DpnII GATC 4 cut(s) 97, 103, 113, 319
DrdI GACNNNNNNGTC 1 cut(s) 55
DseDI GACNNNNNNGTC 1 cut(s) 55
EcoRI GAATTC 1 cut(s) 209
FaeI CATG 2 cut(s) 219, 265
FaiI YATR 7 cut(s) 217, 263, 294, 327, 394, 446, 461
FatI CATG 2 cut(s) 215, 261
Fnu4HI GCNGC 2 cut(s) 177, 234
FokI GGATG 2 cut(s) 142, 146
Fsp4HI GCNGC 2 cut(s) 177, 234
GluI GCNGC 2 cut(s) 177, 234
Hin1II CATG 2 cut(s) 219, 265
HincII GTYRAC 1 cut(s) 465
HindII GTYRAC 1 cut(s) 465
HpaI GTTAAC 1 cut(s) 465
Hpy166II GTNNAC 2 cut(s) 314, 465
Hpy188I TCNGA 2 cut(s) 118, 142
Hpy188III TCNNGA 3 cut(s) 101, 131, 307
Hpy8I GTNNAC 2 cut(s) 314, 465
HpyAV CCTTC 1 cut(s) 72
HpyCH4V TGCA 4 cut(s) 176, 314, 373, 429
HpyF3I CTNAG 3 cut(s) 129, 203, 356
Hsp92II CATG 2 cut(s) 219, 265
KspAI GTTAAC 1 cut(s) 465
Kzo9I GATC 4 cut(s) 97, 103, 113, 319
LmnI GCTCC 1 cut(s) 223
LpnPI CCDG 4 cut(s) 51, 116, 292, 359
Lsp1109I GCAGC 2 cut(s) 188, 245
MalI GATC 4 cut(s) 99, 105, 115, 321
MboI GATC 4 cut(s) 97, 103, 113, 319
MboII GAAGA 5 cut(s) 43, 123, 343, 377, 380
MflI RGATCY 1 cut(s) 319
MhlI GDGCHC 1 cut(s) 316
MluCI AATT 5 cut(s) 124, 143, 209, 244, 456
MnlI CCTC 4 cut(s) 91, 169, 265, 269
MseI TTAA 4 cut(s) 123, 348, 455, 464
NdeII GATC 4 cut(s) 97, 103, 113, 319
NlaIII CATG 2 cut(s) 219, 265
NspI RCATGY 1 cut(s) 219
PciI ACATGT 1 cut(s) 215
PkrI GCNGC 2 cut(s) 178, 235
PscI ACATGT 1 cut(s) 215
PshBI ATTAAT 1 cut(s) 455
PsuI RGATCY 1 cut(s) 319
SaqAI TTAA 4 cut(s) 123, 348, 455, 464
SatI GCNGC 2 cut(s) 177, 234
Sau3AI GATC 4 cut(s) 97, 103, 113, 319
SduI GDGCHC 1 cut(s) 316
SetI ASST 4 cut(s) 204, 228, 451, 473
Sse9I AATT 5 cut(s) 124, 143, 209, 244, 456
SsiI CCGC 1 cut(s) 221
TasI AATT 5 cut(s) 124, 143, 209, 244, 456
Tru1I TTAA 4 cut(s) 123, 348, 455, 464
Tru9I TTAA 4 cut(s) 123, 348, 455, 464
TseI GCWGC 2 cut(s) 176, 233
TspDTI ATGAA 2 cut(s) 17, 54
VneI GTGCAC 1 cut(s) 312
VspI ATTAAT 1 cut(s) 455
XapI RAATTY 3 cut(s) 143, 209, 244
XceI RCATGY 1 cut(s) 219
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.