Basic Information
Type: gene
Physical Location & Seq
Forward (+)
65294333 .. 65295523
Rh1CG382900.1
Length: 267 bp
ATGAGAGATGAGGATCCCACTTGGACTGAGATTTTTCGGAGCCTGAGTTTTGCTTTACCTTCCAGCACAGATCACATCGATGGGGTGGTGGATTTGGGAAGGTTCTGGAGGTTTGTGACTGGGAGGAAGAAGAAGTTGGAGGCTCTGAGGGCGCAAATCTCTTTGGCTTTGACGGAGTGTGCGTGTGGATCCGGGAAGTTTGTTCTGGAGGCGATCTCGGAGGTGTTTCCGGTGGACAAGAGGTCGAATAAGATAGCAGAAAAGTGA
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Protein Analysis
7.79
Isoelectric Point (pI)
| Domain Name |
Pfam ID |
Position |
E-value |
Description |
| Frigida |
PF07899 |
31 - 83 |
2.8e-06 |
Frigida-like protein |
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...
Gene Family Tree
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Publication-ready
Orthologous Genes
(Group: OG0023019)
Restriction Enzyme Sites
| Enzyme |
Recognition Site |
Cut Count |
Positions (bp) |
| AclWI |
GGATC |
4 cut(s)
|
8, 21, 183, 196 |
| AhdI |
GACNNNNNGTC |
1 cut(s)
|
241 |
| AjuI |
GAANNNNNNNTTGG |
2 cut(s)
|
119, 151 |
| AlwI |
GGATC |
4 cut(s)
|
8, 21, 183, 196 |
| AspLEI |
GCGC |
1 cut(s)
|
154 |
| AsuC2I |
CCSGG |
1 cut(s)
|
193 |
| BamHI |
GGATCC |
2 cut(s)
|
13, 188 |
| BccI |
CCATC |
1 cut(s)
|
74 |
| BcnI |
CCSGG |
1 cut(s)
|
193 |
| Bme1390I |
CCNGG |
1 cut(s)
|
193 |
| BmeRI |
GACNNNNNGTC |
1 cut(s)
|
241 |
| BmiI |
GGNNCC |
3 cut(s)
|
15, 41, 190 |
| BmrFI |
CCNGG |
1 cut(s)
|
193 |
| BmrI |
ACTGGG |
1 cut(s)
|
129 |
| BmuI |
ACTGGG |
1 cut(s)
|
129 |
| BplI |
GAGNNNNNCTC |
2 cut(s)
|
200, 232 |
| BpmI |
CTGGAG |
2 cut(s)
|
127, 227 |
| BpuMI |
CCSGG |
1 cut(s)
|
193 |
| Bsa29I |
ATCGAT |
1 cut(s)
|
78 |
| BsaBI |
GATNNNNATC |
1 cut(s)
|
12 |
| BsaWI |
WCCGGW |
1 cut(s)
|
229 |
| BsaXI |
ACNNNNNCTCC |
4 cut(s)
|
31, 61, 167, 197 |
| Bse1I |
ACTGG |
1 cut(s)
|
124 |
| Bse8I |
GATNNNNATC |
1 cut(s)
|
12 |
| BseCI |
ATCGAT |
1 cut(s)
|
78 |
| BseJI |
GATNNNNATC |
1 cut(s)
|
12 |
| BseMII |
CTCAG |
3 cut(s)
|
18, 35, 137 |
| BseNI |
ACTGG |
1 cut(s)
|
124 |
| BshVI |
ATCGAT |
1 cut(s)
|
78 |
| BsiSI |
CCGG |
2 cut(s)
|
192, 230 |
| Bsp143I |
GATC |
4 cut(s)
|
13, 70, 188, 213 |
| BspCNI |
CTCAG |
3 cut(s)
|
19, 36, 138 |
| BspDI |
ATCGAT |
1 cut(s)
|
78 |
| BspLI |
GGNNCC |
3 cut(s)
|
15, 41, 190 |
| BspPI |
GGATC |
4 cut(s)
|
8, 21, 183, 196 |
| BsrI |
ACTGG |
1 cut(s)
|
124 |
| BssMI |
GATC |
4 cut(s)
|
13, 70, 188, 213 |
| BstDEI |
CTNAG |
3 cut(s)
|
27, 44, 146 |
| BstHHI |
GCGC |
1 cut(s)
|
154 |
| BstKTI |
GATC |
4 cut(s)
|
16, 73, 191, 216 |
| BstMBI |
GATC |
4 cut(s)
|
13, 70, 188, 213 |
| BstMWI |
GCNNNNNNNGC |
1 cut(s)
|
149 |
| BstSCI |
CCNGG |
1 cut(s)
|
191 |
| BstX2I |
RGATCY |
2 cut(s)
|
13, 188 |
| BstYI |
RGATCY |
2 cut(s)
|
13, 188 |
| Bsu15I |
ATCGAT |
1 cut(s)
|
78 |
| BsuTUI |
ATCGAT |
1 cut(s)
|
78 |
| CfoI |
GCGC |
1 cut(s)
|
154 |
| ClaI |
ATCGAT |
1 cut(s)
|
78 |
| CviJI |
RGCY |
3 cut(s)
|
42, 143, 167 |
| CviKI_1 |
RGCY |
3 cut(s)
|
42, 143, 167 |
| DdeI |
CTNAG |
3 cut(s)
|
27, 44, 146 |
| DpnI |
GATC |
4 cut(s)
|
15, 72, 190, 215 |
| DpnII |
GATC |
4 cut(s)
|
13, 70, 188, 213 |
| DriI |
GACNNNNNGTC |
1 cut(s)
|
241 |
| Eam1105I |
GACNNNNNGTC |
1 cut(s)
|
241 |
| GlaI |
GCGC |
1 cut(s)
|
153 |
| GsuI |
CTGGAG |
2 cut(s)
|
127, 227 |
| HapII |
CCGG |
2 cut(s)
|
192, 230 |
| HhaI |
GCGC |
1 cut(s)
|
154 |
| Hin6I |
GCGC |
1 cut(s)
|
152 |
| HinP1I |
GCGC |
1 cut(s)
|
152 |
| HpaII |
CCGG |
2 cut(s)
|
192, 230 |
| Hpy166II |
GTNNAC |
1 cut(s)
|
235 |
| Hpy188I |
TCNGA |
3 cut(s)
|
39, 147, 220 |
| Hpy188III |
TCNNGA |
2 cut(s)
|
106, 206 |
| Hpy8I |
GTNNAC |
1 cut(s)
|
235 |
| HpyAV |
CCTTC |
2 cut(s)
|
69, 93 |
| HpyF10VI |
GCNNNNNNNGC |
1 cut(s)
|
149 |
| HpyF3I |
CTNAG |
3 cut(s)
|
27, 44, 146 |
| HspAI |
GCGC |
1 cut(s)
|
152 |
| Kzo9I |
GATC |
4 cut(s)
|
13, 70, 188, 213 |
| LmnI |
GCTCC |
1 cut(s)
|
39 |
| LpnPI |
CCDG |
7 cut(s)
|
56, 76, 91, 105, 191, 205, 243 |
| MaeIII |
GTNAC |
1 cut(s)
|
115 |
| MalI |
GATC |
4 cut(s)
|
15, 72, 190, 215 |
| MboI |
GATC |
4 cut(s)
|
13, 70, 188, 213 |
| MboII |
GAAGA |
2 cut(s)
|
139, 142 |
| MflI |
RGATCY |
2 cut(s)
|
13, 188 |
| MmeI |
TCCRAC |
1 cut(s)
|
117 |
| MnlI |
CCTC |
8 cut(s)
|
4, 102, 117, 133, 141, 202, 214, 234 |
| MslI |
CAYNNNNRTG |
1 cut(s)
|
78 |
| MspI |
CCGG |
2 cut(s)
|
192, 230 |
| MspR9I |
CCNGG |
1 cut(s)
|
193 |
| MwoI |
GCNNNNNNNGC |
1 cut(s)
|
149 |
| NciI |
CCSGG |
1 cut(s)
|
193 |
| NdeII |
GATC |
4 cut(s)
|
13, 70, 188, 213 |
| NlaIV |
GGNNCC |
3 cut(s)
|
15, 41, 190 |
| NmuCI |
GTSAC |
1 cut(s)
|
115 |
| PcsI |
WCGNNNNNNNCGW |
1 cut(s)
|
179 |
| PfoI |
TCCNGGA |
1 cut(s)
|
191 |
| PspN4I |
GGNNCC |
3 cut(s)
|
15, 41, 190 |
| PsuI |
RGATCY |
2 cut(s)
|
13, 188 |
| RseI |
CAYNNNNRTG |
1 cut(s)
|
78 |
| Sau3AI |
GATC |
4 cut(s)
|
13, 70, 188, 213 |
| ScrFI |
CCNGG |
1 cut(s)
|
193 |
| SetI |
ASST |
5 cut(s)
|
61, 104, 113, 225, 245 |
| SmiMI |
CAYNNNNRTG |
1 cut(s)
|
78 |
| StyD4I |
CCNGG |
1 cut(s)
|
191 |
| TaqI |
TCGA |
2 cut(s)
|
78, 245 |
| TseFI |
GTSAC |
1 cut(s)
|
115 |
| Tsp45I |
GTSAC |
1 cut(s)
|
115 |
| TspGWI |
ACGGA |
1 cut(s)
|
188 |
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.