Rh1CG434800
NAC Family

NAC domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
Physical Location & Seq
Reverse (-)
69004351 .. 69007315
2965 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1CG434800.1

Sequence Viewer

Length: 1341 bp
ATGGAAATCATAAACAAGTCAGCGTTATTCGGGAAATTGATGTTTGCAAATGGGAGCCCTGGGATTTGCCTGAGTCCTTTTGTCCTTTGTCGTCTGTTTAAAAAACAAGATGAGAGTATCGAAATTTCAAACTGTGATGAAACTGAACCGGCTGTATCCTCCCCTAGCGTTGTCAAATCTCCTCTTGAAGACACGCAGTCTGCTCAAGCACTGGTTCCACCATCACCATCAAGTCAAGTGCAACCTGAAAAGCTTCCTACTAGAGCAGAATGTACTAATGTCGATAATTATGATGGGATGGCATCAGACCCTCTACCAATTAGTGAGTGCCCTAGCAACAGCTGCAATGATTTTGATGGACCAGGTCAACTGGATCTGCCACTCGAGGAATATTTAAGCAGATTTTATGACCCCGAGGAAGAGCCACTTTTTCCCCCTATGCACTCACATATGGAAGTGGAGCATTGTTACCCTGGTAGCAATGGCTTAAACAATGGTCATAGAGGGTTGCAGTTTCCCAATGACAGCAATGATCAAGATGCAGAAATTTCTGAGTTCCTGAGCACAATATTCAACAGTTCAGAGGAATGCTCCTTCGAAGATTTGGACACTCAGATTTGTGAGACCAAGAATGTTGTCTCCATTAAGGACTATGGATCATGCAATGATGCAGGCGCAAAACTGAATGAAGTACTGTACATGGAAGAGCTTCAAACCCCTATTTGGTTGGAGGGGAATATTGATAGAAAGGGCCCCATGCAGATTGCAACAACTCCACAAAATTATGAACAATCCTCAAGGGTTGAGGTGTCAAGCAATCATTCAAATGCACTTCTCAGTCCCAGTGGTGGCACAGGAATTAGGATTATGACTCGCCAAACACCTCCAACTAGCACTGTGAGACAGAGTATTATGACACAGGGTGAAGCACCAAGAAGATTAATGTACCAGAGCACACTTCAAATAGGGTCAATTCAGTGCAGGAATATGTCTCAAGACCTGCATTATAGACCAGAAGACCATGAAAGAAAACTAATCGCTGTGGAGGAGTCGAGAGATCCAGAAAAGATAGCTAGTAGTGATACTGCTTTTGATGCTGGTAATGCTTTGGATGAACCCCTGGAGACACTCATTGTCGAGTCCAGTAACCAGACTATTTCCGCCGCACCAAATATCACATCAATGGGCAGCATTTTGACAGGCAAAAAGGTTCCTTCTGTGGTCTTGAAGGCCACTCCTGCTGGCCATTCTATTTGGTCATTTGCCTTTATGTTTAGAGTAGTTGTGGGTGCAATTTTGTTTATAATATTTGCTAGCATGTGGGGATTTCATAAGTTTTGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

446

Amino Acids

49.12

Weight (kDa)

4.61

Isoelectric Point (pI)

63.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1304
Acc36I ACCTGC 1 cut(s) 1008
AciI CCGC 2 cut(s) 1161, 1164
AclWI GGATC 3 cut(s) 381, 664, 1052
AcoI YGGCCR 1 cut(s) 1243
AcsI RAATTY 2 cut(s) 123, 546
AdeI CACNNNGTG 1 cut(s) 923
AfaI GTAC 4 cut(s) 274, 693, 698, 947
AfiI CCNNNNNNNGG 2 cut(s) 723, 848
AgsI TTSAA 7 cut(s) 129, 188, 574, 713, 825, 962, 1228
AhdI GACNNNNNGTC 1 cut(s) 196
AjnI CCWGG 4 cut(s) 58, 361, 472, 1119
AluBI AGCT 4 cut(s) 253, 342, 709, 1073
AluI AGCT 4 cut(s) 253, 342, 709, 1073
Alw21I GWGCWC 2 cut(s) 566, 956
Alw26I GTCTC 5 cut(s) 617, 643, 895, 996, 1118
AlwI GGATC 3 cut(s) 381, 664, 1052
Ama87I CYCGRG 2 cut(s) 383, 413
AoxI GGCC 3 cut(s) 751, 1230, 1243
ApaI GGGCCC 1 cut(s) 755
ApeKI GCWGC 2 cut(s) 342, 1188
ApoI RAATTY 2 cut(s) 123, 546
AseI ATTAAT 1 cut(s) 941
Asp700I GAANNNNTTC 2 cut(s) 252, 708
AspLEI GCGC 1 cut(s) 677
AspS9I GGNCC 3 cut(s) 359, 751, 752
AsuHPI GGTGA 2 cut(s) 216, 935
AsuII TTCGAA 1 cut(s) 597
AsuNHI GCTAGC 1 cut(s) 1313
AvaI CYCGRG 2 cut(s) 383, 413
AvaII GGWCC 1 cut(s) 359
BaeGI GKGCMC 2 cut(s) 332, 755
BalI TGGCCA 1 cut(s) 1245
BanII GRGCYC 2 cut(s) 59, 755
BbsI GAAGAC 2 cut(s) 195, 1023
Bbv12I GWGCWC 2 cut(s) 566, 956
BbvI GCAGC 2 cut(s) 329, 1200
BccI CCATC 5 cut(s) 229, 235, 287, 292, 350
BciT130I CCWGG 4 cut(s) 60, 363, 474, 1121
BciVI GTATCC 1 cut(s) 166
BclI TGATCA 1 cut(s) 532
BcoDI GTCTC 5 cut(s) 617, 643, 895, 996, 1118
BfaI CTAG 6 cut(s) 165, 261, 333, 891, 1074, 1314
BfuAI ACCTGC 1 cut(s) 1008
BfuI GTATCC 1 cut(s) 166
BisI GCNGC 3 cut(s) 343, 1164, 1189
BlsI GCNGC 3 cut(s) 344, 1165, 1190
BmcAI AGTACT 1 cut(s) 693
Bme1390I CCNGG 4 cut(s) 60, 363, 474, 1121
Bme18I GGWCC 1 cut(s) 359
BmeRI GACNNNNNGTC 1 cut(s) 196
BmeT110I CYCGRG 2 cut(s) 383, 413
BmgT120I GGNCC 3 cut(s) 359, 751, 752
BmiI GGNNCC 5 cut(s) 56, 216, 753, 754, 1212
BmrFI CCNGG 4 cut(s) 60, 363, 474, 1121
BmrI ACTGGG 1 cut(s) 837
BmsI GCATC 4 cut(s) 311, 529, 658, 1084
BmtI GCTAGC 1 cut(s) 1317
BmuI ACTGGG 1 cut(s) 837
BpiI GAAGAC 2 cut(s) 195, 1023
BplI GAGNNNNNCTC 2 cut(s) 575, 607
BpmI CTGGAG 1 cut(s) 1142
Bpu10I CCTNAGC 1 cut(s) 560
Bpu14I TTCGAA 1 cut(s) 597
BpuEI CTTGAG 3 cut(s) 189, 781, 978
BsaI GGTCTC 1 cut(s) 617
BsaJI CCNNGG 5 cut(s) 58, 59, 414, 472, 1119
Bsc4I CCNNNNNNNGG 2 cut(s) 723, 848
Bse118I RCCGGY 1 cut(s) 148
Bse1I ACTGG 4 cut(s) 216, 375, 843, 1143
Bse3DI GCAATG 4 cut(s) 352, 487, 535, 670
BseBI CCWGG 4 cut(s) 60, 363, 474, 1121
BseDI CCNNGG 5 cut(s) 58, 59, 414, 472, 1119
BseGI GGATG 2 cut(s) 303, 1117
BseLI CCNNNNNNNGG 2 cut(s) 723, 848
BseMI GCAATG 4 cut(s) 352, 487, 535, 670
BseMII CTCAG 5 cut(s) 62, 543, 551, 626, 850
BseNI ACTGG 4 cut(s) 216, 375, 843, 1143
BseRI GAGGAG 2 cut(s) 171, 1061
BseSI GKGCMC 2 cut(s) 332, 755
BseXI GCAGC 2 cut(s) 329, 1200
BsgI GTGCAG 1 cut(s) 1000
BshFI GGCC 3 cut(s) 753, 1232, 1245
BsiHKAI GWGCWC 2 cut(s) 566, 956
BsiHKCI CYCGRG 2 cut(s) 383, 413
BsiSI CCGG 1 cut(s) 149
BslFI GGGAC 1 cut(s) 825
BslI CCNNNNNNNGG 2 cut(s) 723, 848
BsmAI GTCTC 5 cut(s) 617, 643, 895, 996, 1118
BsmFI GGGAC 1 cut(s) 825
BsmI GAATGC 1 cut(s) 593
BsnI GGCC 3 cut(s) 753, 1232, 1245
Bso31I GGTCTC 1 cut(s) 617
BsoBI CYCGRG 2 cut(s) 383, 413
Bsp119I TTCGAA 1 cut(s) 597
Bsp120I GGGCCC 1 cut(s) 751
Bsp1286I GDGCHC 5 cut(s) 59, 332, 566, 755, 956
Bsp1407I TGTACA 1 cut(s) 696
Bsp143I GATC 4 cut(s) 373, 532, 656, 1057
BspACI CCGC 2 cut(s) 1161, 1164
BspANI GGCC 3 cut(s) 753, 1232, 1245
BspCNI CTCAG 5 cut(s) 63, 544, 552, 625, 849
BspLI GGNNCC 5 cut(s) 56, 216, 753, 754, 1212
BspMI ACCTGC 1 cut(s) 1008
BspOI GCTAGC 1 cut(s) 1317
BspPI GGATC 3 cut(s) 381, 664, 1052
BspQI GCTCTTC 2 cut(s) 414, 699
BspT104I TTCGAA 1 cut(s) 597
BspTNI GGTCTC 1 cut(s) 617
BsrDI GCAATG 4 cut(s) 352, 487, 535, 670
BsrFI RCCGGY 1 cut(s) 148
BsrGI TGTACA 1 cut(s) 696
BsrI ACTGG 4 cut(s) 216, 375, 843, 1143
BssAI RCCGGY 1 cut(s) 148
BssECI CCNNGG 5 cut(s) 58, 59, 414, 472, 1119
BssMI GATC 4 cut(s) 373, 532, 656, 1057
Bst2UI CCWGG 4 cut(s) 60, 363, 474, 1121
Bst4CI ACNGT 4 cut(s) 134, 578, 696, 898
Bst6I CTCTTC 2 cut(s) 414, 699
BstAPI GCANNNNNTGC 1 cut(s) 342
BstAUI TGTACA 1 cut(s) 696
BstBI TTCGAA 1 cut(s) 597
BstC8I GCNNGC 3 cut(s) 673, 1243, 1315
BstDEI CTNAG 5 cut(s) 71, 552, 560, 612, 836
BstF5I GGATG 2 cut(s) 303, 1117
BstHHI GCGC 1 cut(s) 677
BstKTI GATC 4 cut(s) 376, 535, 659, 1060
BstMAI GTCTC 5 cut(s) 617, 643, 895, 996, 1118
BstMBI GATC 4 cut(s) 373, 532, 656, 1057
BstMWI GCNNNNNNNGC 4 cut(s) 342, 1094, 1103, 1238
BstNI CCWGG 4 cut(s) 60, 363, 474, 1121
BstNSI RCATGY 1 cut(s) 1321
BstSCI CCNGG 4 cut(s) 58, 361, 472, 1119
BstSLI GKGCMC 2 cut(s) 332, 755
BstV1I GCAGC 2 cut(s) 329, 1200
BstV2I GAAGAC 2 cut(s) 195, 1023
BstX2I RGATCY 2 cut(s) 373, 1057
BstYI RGATCY 2 cut(s) 373, 1057
BsuI GTATCC 1 cut(s) 166
BsuRI GGCC 3 cut(s) 753, 1232, 1245
BtsCI GGATG 2 cut(s) 303, 1117
BtsIMutI CAGTG 4 cut(s) 209, 850, 894, 983
BveI ACCTGC 1 cut(s) 1008
Cac8I GCNNGC 3 cut(s) 673, 1243, 1315
CfoI GCGC 1 cut(s) 677
Cfr10I RCCGGY 1 cut(s) 148
Cfr13I GGNCC 3 cut(s) 359, 751, 752
CsiI ACCWGGT 1 cut(s) 361
Csp6I GTAC 4 cut(s) 273, 692, 697, 946
CviAII CATG 5 cut(s) 660, 700, 757, 1022, 1318
CviQI GTAC 4 cut(s) 273, 692, 697, 946
DdeI CTNAG 5 cut(s) 71, 552, 560, 612, 836
DpnI GATC 4 cut(s) 375, 534, 658, 1059
DpnII GATC 4 cut(s) 373, 532, 656, 1057
DraI TTTAAA 1 cut(s) 100
DraIII CACNNNGTG 1 cut(s) 923
DriI GACNNNNNGTC 1 cut(s) 196
EaeI YGGCCR 1 cut(s) 1243
Eam1104I CTCTTC 2 cut(s) 414, 699
Eam1105I GACNNNNNGTC 1 cut(s) 196
EarI CTCTTC 2 cut(s) 414, 699
EciI GGCGGA 1 cut(s) 1150
Eco24I GRGCYC 2 cut(s) 59, 755
Eco31I GGTCTC 1 cut(s) 617
Eco47I GGWCC 1 cut(s) 359
Eco88I CYCGRG 2 cut(s) 383, 413
EcoO109I RGGNCCY 2 cut(s) 751, 752
EcoRII CCWGG 4 cut(s) 58, 361, 472, 1119
EcoT38I GRGCYC 2 cut(s) 59, 755
FaeI CATG 5 cut(s) 663, 703, 760, 1025, 1321
FalI AAGNNNNNCTT 2 cut(s) 411, 443
FaqI GGGAC 1 cut(s) 825
FatI CATG 5 cut(s) 659, 699, 756, 1021, 1317
FauNDI CATATG 1 cut(s) 450
FbaI TGATCA 1 cut(s) 532
Fnu4HI GCNGC 3 cut(s) 343, 1164, 1189
FokI GGATG 2 cut(s) 310, 1124
FriOI GRGCYC 2 cut(s) 59, 755
Fsp4HI GCNGC 3 cut(s) 343, 1164, 1189
FspBI CTAG 6 cut(s) 165, 261, 333, 891, 1074, 1314
GlaI GCGC 1 cut(s) 676
GluI GCNGC 3 cut(s) 343, 1164, 1189
GsuI CTGGAG 1 cut(s) 1142
HaeIII GGCC 3 cut(s) 753, 1232, 1245
HapII CCGG 1 cut(s) 149
HhaI GCGC 1 cut(s) 677
Hin1II CATG 5 cut(s) 663, 703, 760, 1025, 1321
Hin6I GCGC 1 cut(s) 675
HinP1I GCGC 1 cut(s) 675
HincII GTYRAC 1 cut(s) 368
HindII GTYRAC 1 cut(s) 368
HindIII AAGCTT 1 cut(s) 251
HinfI GANTC 4 cut(s) 73, 871, 1049, 1139
HpaII CCGG 1 cut(s) 149
HphI GGTGA 2 cut(s) 216, 935
Hpy166II GTNNAC 1 cut(s) 368
Hpy188I TCNGA 4 cut(s) 307, 553, 583, 615
Hpy188III TCNNGA 8 cut(s) 31, 185, 536, 559, 995, 1053, 1061, 1225
Hpy8I GTNNAC 1 cut(s) 368
HpyAV CCTTC 3 cut(s) 604, 1222, 1224
HpyCH4III ACNGT 4 cut(s) 134, 578, 696, 898
HpyF10VI GCNNNNNNNGC 4 cut(s) 342, 1094, 1103, 1238
HpyF3I CTNAG 5 cut(s) 71, 552, 560, 612, 836
Hsp92II CATG 5 cut(s) 663, 703, 760, 1025, 1321
HspAI GCGC 1 cut(s) 675
Ksp22I TGATCA 1 cut(s) 532
Kzo9I GATC 4 cut(s) 373, 532, 656, 1057
LguI GCTCTTC 2 cut(s) 414, 699
LmnI GCTCC 3 cut(s) 54, 460, 596
Lsp1109I GCAGC 2 cut(s) 329, 1200
LweI GCATC 4 cut(s) 311, 529, 658, 1084
MabI ACCWGGT 1 cut(s) 361
MaeI CTAG 6 cut(s) 165, 261, 333, 891, 1074, 1314
MaeIII GTNAC 2 cut(s) 467, 1145
MalI GATC 4 cut(s) 375, 534, 658, 1059
MboI GATC 4 cut(s) 373, 532, 656, 1057
MboII GAAGA 6 cut(s) 200, 431, 611, 716, 948, 1028
MflI RGATCY 2 cut(s) 373, 1057
MhlI GDGCHC 5 cut(s) 59, 332, 566, 755, 956
MlsI TGGCCA 1 cut(s) 1245
MluCI AATT 9 cut(s) 35, 123, 286, 318, 546, 781, 858, 972, 1293
MluNI TGGCCA 1 cut(s) 1245
MlyI GAGTC 4 cut(s) 82, 865, 1058, 1148
MmeI TCCRAC 2 cut(s) 708, 911
Mox20I TGGCCA 1 cut(s) 1245
MroXI GAANNNNTTC 2 cut(s) 252, 708
MscI TGGCCA 1 cut(s) 1245
MseI TTAA 5 cut(s) 99, 395, 488, 645, 941
MslI CAYNNNNRTG 2 cut(s) 825, 1181
Msp20I TGGCCA 1 cut(s) 1245
MspA1I CMGCKG 1 cut(s) 342
MspI CCGG 1 cut(s) 149
MspR9I CCNGG 4 cut(s) 60, 363, 474, 1121
Mva1269I GAATGC 1 cut(s) 593
MvaI CCWGG 4 cut(s) 60, 363, 474, 1121
MwoI GCNNNNNNNGC 4 cut(s) 342, 1094, 1103, 1238
NdeI CATATG 1 cut(s) 450
NdeII GATC 4 cut(s) 373, 532, 656, 1057
NheI GCTAGC 1 cut(s) 1313
NlaIII CATG 5 cut(s) 663, 703, 760, 1025, 1321
NlaIV GGNNCC 5 cut(s) 56, 216, 753, 754, 1212
NspI RCATGY 1 cut(s) 1321
NspV TTCGAA 1 cut(s) 597
PaeR7I CTCGAG 1 cut(s) 383
PasI CCCWGGG 1 cut(s) 59
PciSI GCTCTTC 2 cut(s) 414, 699
PctI GAATGC 1 cut(s) 593
PdmI GAANNNNTTC 2 cut(s) 252, 708
PflFI GACNNNGTC 1 cut(s) 363
PkrI GCNGC 3 cut(s) 344, 1165, 1190
PleI GAGTC 4 cut(s) 81, 865, 1057, 1147
PpsI GAGTC 4 cut(s) 81, 865, 1057, 1147
PshBI ATTAAT 1 cut(s) 941
PsiI TTATAA 1 cut(s) 1304
Psp6I CCWGG 4 cut(s) 58, 361, 472, 1119
PspGI CCWGG 4 cut(s) 58, 361, 472, 1119
PspN4I GGNNCC 5 cut(s) 56, 216, 753, 754, 1212
PspOMI GGGCCC 1 cut(s) 751
PspPI GGNCC 3 cut(s) 359, 751, 752
PspXI VCTCGAGB 1 cut(s) 383
PsuI RGATCY 2 cut(s) 373, 1057
PsyI GACNNNGTC 1 cut(s) 363
PvuII CAGCTG 1 cut(s) 342
RsaI GTAC 4 cut(s) 274, 693, 698, 947
RsaNI GTAC 4 cut(s) 273, 692, 697, 946
RseI CAYNNNNRTG 2 cut(s) 825, 1181
SapI GCTCTTC 2 cut(s) 414, 699
SaqAI TTAA 5 cut(s) 99, 395, 488, 645, 941
SatI GCNGC 3 cut(s) 343, 1164, 1189
Sau3AI GATC 4 cut(s) 373, 532, 656, 1057
Sau96I GGNCC 3 cut(s) 359, 751, 752
ScaI AGTACT 1 cut(s) 693
SchI GAGTC 4 cut(s) 82, 865, 1058, 1148
ScrFI CCNGG 4 cut(s) 60, 363, 474, 1121
SduI GDGCHC 5 cut(s) 59, 332, 566, 755, 956
SexAI ACCWGGT 1 cut(s) 361
SfaNI GCATC 4 cut(s) 311, 529, 658, 1084
Sfr274I CTCGAG 1 cut(s) 383
SfuI TTCGAA 1 cut(s) 597
SinI GGWCC 1 cut(s) 359
SlaI CTCGAG 1 cut(s) 383
SmiMI CAYNNNNRTG 2 cut(s) 825, 1181
SmlI CTYRAG 4 cut(s) 204, 383, 796, 993
SmoI CTYRAG 4 cut(s) 204, 383, 796, 993
Sse9I AATT 9 cut(s) 35, 123, 286, 318, 546, 781, 858, 972, 1293
SsiI CCGC 2 cut(s) 1161, 1164
SspI AATATT 4 cut(s) 392, 570, 739, 1308
SspMI CTAG 6 cut(s) 165, 261, 333, 891, 1074, 1314
StyD4I CCNGG 4 cut(s) 58, 361, 472, 1119
TaaI ACNGT 4 cut(s) 134, 578, 696, 898
TaqI TCGA 6 cut(s) 120, 282, 384, 597, 1052, 1137
TasI AATT 9 cut(s) 35, 123, 286, 318, 546, 781, 858, 972, 1293
TatI WGTACW 3 cut(s) 272, 691, 696
TauI GCSGC 1 cut(s) 1166
Tru1I TTAA 5 cut(s) 99, 395, 488, 645, 941
Tru9I TTAA 5 cut(s) 99, 395, 488, 645, 941
TscAI CASTG 4 cut(s) 216, 850, 901, 983
TseI GCWGC 2 cut(s) 342, 1188
TspDTI ATGAA 6 cut(s) 153, 702, 801, 1038, 1128, 1319
TspRI CASTG 4 cut(s) 216, 850, 901, 983
Tth111I GACNNNGTC 1 cut(s) 363
VpaK11BI GGWCC 1 cut(s) 359
VspI ATTAAT 1 cut(s) 941
XapI RAATTY 2 cut(s) 123, 546
XceI RCATGY 1 cut(s) 1321
XhoI CTCGAG 1 cut(s) 383
XmnI GAANNNNTTC 2 cut(s) 252, 708
XspI CTAG 6 cut(s) 165, 261, 333, 891, 1074, 1314
ZrmI AGTACT 1 cut(s) 693
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.