Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1D

Orthogroup ID

OG0015427

Physical Location & Seq

Genomic Coordinates Reverse (-)

28628990 .. 28631367

Gene Structure 2378 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1DG136400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1545 bp

ATGGCTTCTCTATCCTTTTCCTCTGCTTCACTTTCTTCTTACTACCACCTCTTCTTCACTCTCTTAGCTTTCCTAATCTCCGGCCTCATTTTCCTGCTCACCCAGAAATCCAAATCCAAACAACTCAACCTCCCTCCCGGACCACCCGGATGGCCTATAGTCGGCAACCTCTTCCAAGTCGCTCGCTCCGGCAAGCCCTTCTTCGTCTACGCAAACGAGCTCAGGCTCAAGTACGGCCCAATATTGACTCTCAAGATGGGCACCAGGACCATGATCATTATCAGCGACGCCAAGCTCGTCCACGAAGCCCTCATCGAAAAGGGTGCGGTCTACGCCACAAGACCTAGAGAAAATCCCACTCGGACAATCTTCAGCTGCAACAAGTTCACCGTCAACGCTTCGATTTACGGCTCCGTGTGGCGGTCGTTGAGGCGGAACATGGTCCAGAATATGCTCAGCTCAACCAGGCTCAAAGAGTTCCGAAGCGTCCGCGAAAATGCAATGGACACACTAGTCGAGAGGATTAATATGGAGGCCAAGGCCAACGACGGCGTAGTTTCCGTGCTGAAAAACTCGCGCTTCGCCGTGTTTTGTATTCTCTTGGCCATGTGTTTCGGTATCGAAATGGACGAAGAGAACGTGGAGAAAATGGATCAGGTAATGAAGGCCGTTCTGATTGTGTTGGATCCCAGAATCGATGACTATCTTCCTATTCTGAGTCCCTTCTTCTCCAAGCAAAGAAAGAGAGCTCTGGAAGTGAGAAAGGAGCAGGTGGATTATATGGTCCCCTTCATCGAACGGCGTCGTCGGGCACTCGAAAACCCAGGATCGGATCGACAAGCCACTTCATTCTCTTACCTCGACACGCTTTTCGACCTCAAAGTAGATGGACGCAAATCATCCCCTTCGAACAGTGAACTGGTCTCACTTTGCTCGGAGTTTCTGAACGGTGGGACCGACACAACGGCGACAGCTCTGGAGTGGGGAATTGCACAGCTCATAGTGAACCCTCAAGTACAAGAGAAGCTGTACGCGGAAGTTAAAGCGACAGTGGGTGAAAGAAAGGTGGACGAAAAGGACGTGGAGAAAATGCCCTATTTGCAAGCAGTGGTGAAGGAGCTTTTACGAAAACACCCTCCCACCTATTTTTCCCTAACCCATGCTGTGACCGAGCCAACTACTTTGGCGGGGTACGACATTCCCACTGATGCAAATGTCGAGTTCTACTTGCCCGGGATTTCGGAGGATCCCAAATTGTGGTCCGACCCCGAGAAGTTCGATCCCGACCGGTTCGTGTCCGGCAGGGAAGATGCGGACATAACGGGCGTGACCGGAGTTAAAATGATGCCGTTCAGTGTCGGGAGGAGGATTTGCCCCGGTTTGGCCATGGCCACAGTTCATGTTCATCTCATGTTGGCTAGAATGGTTCAAGAGTTTGAGTGGAGTGCGTACCCGGCTGGAAGTAAGTTGGATTTTACAGGCAAGTTAGAATTTACTGTGGTGATGAAGAATTCGCTAAGAGCTAAGATCAAGCCCAGGGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0006082 GO:0006629 GO:0006631 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010143 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0019395 GO:0019748 GO:0019752 GO:0030258 GO:0032787 GO:0034440 GO:0043170 GO:0043436 GO:0044237 GO:0044238 GO:0044255 GO:0044281 GO:0044550 GO:0052722 GO:0055114 GO:0071704 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00073 map00073

Pfam Domains

Protein Families

p450

Protein Analysis

514

Amino Acids

58.01

Weight (kDa)

9.08

Isoelectric Point (pI)

39.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	45 - 503	1e-112	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015427)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G10570 AT5G04660
fragaria_vesca	FvH4_7g05960
malus_domestica	MD02G1247800.v1.1 MD07G1068700.v1.1
prunus_persica	Prupe.2G086300_v2.0.a1
pyrus_communis	pycom02g21180 pycom07g05280
rosa_chinensis	RchiOBHm_Chr1g0333181
rosa_laevigata	RLG00000029620
rosa_multiflora	Rmu_sc0001214.1_g000041
rosa_roxburghii	Rroxscaffold_4G00317700
rosa_rugosa	Rorug01G0108000
rosa_samantha	Rh1BG100400 Rh1DG136400
rosa_wichuraiana	Rw1G010830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	760
AasI	GACNNNNNNGTC	1 cut(s)	512
Acc36I	ACCTGC	1 cut(s)	760
AccB1I	GGYRCC	1 cut(s)	260
AccB7I	CCANNNNNTGG	1 cut(s)	1257
AccI	GTMKAC	2 cut(s)	207, 330
AccII	CGCG	3 cut(s)	492, 577, 1034
AciI	CCGC	7 cut(s)	326, 421, 433, 490, 1034, 1187, 1313
AclWI	GGATC	8 cut(s)	660, 680, 693, 835, 840, 1241, 1254, 1274
AcoI	YGGCCR	3 cut(s)	603, 1383, 1389
AcsI	RAATTY	2 cut(s)	1490, 1510
AcuI	CTGAAG	1 cut(s)	355
AcyI	GRCGYC	2 cut(s)	288, 802
AfaI	GTAC	5 cut(s)	233, 1017, 1031, 1193, 1451
AfiI	CCNNNNNNNGG	5 cut(s)	161, 420, 829, 1257, 1381
AgeI	ACCGGT	1 cut(s)	1287
AgsI	TTSAA	1 cut(s)	1430
AhlI	ACTAGT	1 cut(s)	511
AjiI	CACGTC	1 cut(s)	1081
AjnI	CCWGG	4 cut(s)	263, 464, 823, 1535
Alw21I	GWGCWC	2 cut(s)	222, 751
Alw26I	GTCTC	1 cut(s)	928
AlwI	GGATC	8 cut(s)	660, 680, 693, 835, 840, 1241, 1254, 1274
Ama87I	CYCGRG	2 cut(s)	1232, 1268
AoxI	GGCC	9 cut(s)	82, 152, 235, 534, 540, 603, 666, 1383, 1389
ApeKI	GCWGC	1 cut(s)	375
ApoI	RAATTY	2 cut(s)	1490, 1510
ArsI	GACNNNNNNTTYG	2 cut(s)	854, 886
AseI	ATTAAT	1 cut(s)	525
AsiGI	ACCGGT	1 cut(s)	1287
AspLEI	GCGC	1 cut(s)	579
AspS9I	GGNCC	7 cut(s)	140, 236, 267, 442, 784, 954, 1260
AsuC2I	CCSGG	6 cut(s)	138, 147, 1233, 1234, 1377, 1454
AsuHPI	GGTGA	5 cut(s)	91, 379, 1067, 1123, 1513
AsuII	TTCGAA	1 cut(s)	908
AvaI	CYCGRG	2 cut(s)	1232, 1268
AvaII	GGWCC	6 cut(s)	140, 267, 442, 784, 954, 1260
BaeGI	GKGCMC	2 cut(s)	263, 814
BalI	TGGCCA	3 cut(s)	605, 1385, 1391
BamHI	GGATCC	2 cut(s)	685, 1246
BanI	GGYRCC	1 cut(s)	260
BanII	GRGCYC	2 cut(s)	222, 751
Bbv12I	GWGCWC	2 cut(s)	222, 751
BbvI	GCAGC	1 cut(s)	362
BccI	CCATC	3 cut(s)	144, 250, 881
BceAI	ACGGC	8 cut(s)	250, 424, 565, 569, 653, 815, 981, 1333
BcgI	CGANNNNNNTGC	2 cut(s)	305, 339
BciT130I	CCWGG	4 cut(s)	265, 466, 825, 1537
BclI	TGATCA	1 cut(s)	273
BcnI	CCSGG	6 cut(s)	138, 147, 1233, 1234, 1377, 1454
BcoDI	GTCTC	1 cut(s)	928
BcuI	ACTAGT	1 cut(s)	511
BfaI	CTAG	3 cut(s)	345, 512, 1419
BfmI	CTRYAG	1 cut(s)	156
BfuAI	ACCTGC	1 cut(s)	760
BisI	GCNGC	1 cut(s)	376
BlpI	GCTNAGC	1 cut(s)	455
BlsI	GCNGC	1 cut(s)	377
Bme18I	GGWCC	6 cut(s)	140, 267, 442, 784, 954, 1260
BmeT110I	CYCGRG	2 cut(s)	1232, 1268
BmgBI	CACGTC	1 cut(s)	1081
BmgT120I	GGNCC	7 cut(s)	140, 236, 267, 442, 784, 954, 1260
BmiI	GGNNCC	6 cut(s)	262, 412, 687, 786, 955, 1248
BmsI	GCATC	3 cut(s)	1198, 1300, 1335
BpmI	CTGGAG	1 cut(s)	998
Bpu10I	CCTNAGC	1 cut(s)	221
Bpu1102I	GCTNAGC	1 cut(s)	455
Bpu14I	TTCGAA	1 cut(s)	908
BpuEI	CTTGAG	3 cut(s)	212, 236, 996
BpuMI	CCSGG	6 cut(s)	138, 147, 1233, 1234, 1377, 1454
Bsa29I	ATCGAT	1 cut(s)	696
BsaBI	GATNNNNATC	2 cut(s)	278, 702
BsaHI	GRCGYC	2 cut(s)	288, 802
BsaI	GGTCTC	1 cut(s)	928
BsaJI	CCNNGG	7 cut(s)	537, 823, 1232, 1375, 1386, 1535, 1536
BsaWI	WCCGGW	2 cut(s)	1287, 1331
BsaXI	ACNNNNNCTCC	2 cut(s)	114, 144
Bsc4I	CCNNNNNNNGG	5 cut(s)	161, 420, 829, 1257, 1381
Bse118I	RCCGGY	1 cut(s)	1287
Bse1I	ACTGG	1 cut(s)	924
Bse3DI	GCAATG	1 cut(s)	507
Bse8I	GATNNNNATC	2 cut(s)	278, 702
BseBI	CCWGG	4 cut(s)	265, 466, 825, 1537
BseCI	ATCGAT	1 cut(s)	696
BseDI	CCNNGG	7 cut(s)	537, 823, 1232, 1375, 1386, 1535, 1536
BseGI	GGATG	2 cut(s)	155, 899
BseJI	GATNNNNATC	2 cut(s)	278, 702
BseLI	CCNNNNNNNGG	5 cut(s)	161, 420, 829, 1257, 1381
BseMI	GCAATG	1 cut(s)	507
BseMII	CTCAG	3 cut(s)	235, 469, 707
BseNI	ACTGG	1 cut(s)	924
BseRI	GAGGAG	1 cut(s)	1378
BseSI	GKGCMC	2 cut(s)	263, 814
BseXI	GCAGC	1 cut(s)	362
Bsh1236I	CGCG	3 cut(s)	492, 577, 1034
Bsh1285I	CGRYCG	2 cut(s)	425, 1288
BshFI	GGCC	9 cut(s)	84, 154, 237, 536, 542, 605, 668, 1385, 1391
BshNI	GGYRCC	1 cut(s)	260
BshTI	ACCGGT	1 cut(s)	1287
BshVI	ATCGAT	1 cut(s)	696
BsiEI	CGRYCG	2 cut(s)	425, 1288
BsiHKAI	GWGCWC	2 cut(s)	222, 751
BsiHKCI	CYCGRG	2 cut(s)	1232, 1268
BslFI	GGGAC	3 cut(s)	705, 770, 967
BslI	CCNNNNNNNGG	5 cut(s)	161, 420, 829, 1257, 1381
BsmAI	GTCTC	1 cut(s)	928
BsmFI	GGGAC	3 cut(s)	705, 770, 967
BsnI	GGCC	9 cut(s)	84, 154, 237, 536, 542, 605, 668, 1385, 1391
Bso31I	GGTCTC	1 cut(s)	928
BsoBI	CYCGRG	2 cut(s)	1232, 1268
Bsp119I	TTCGAA	1 cut(s)	908
Bsp1286I	GDGCHC	4 cut(s)	222, 263, 751, 814
Bsp143I	GATC	8 cut(s)	273, 652, 685, 827, 832, 1246, 1279, 1527
Bsp1720I	GCTNAGC	1 cut(s)	455
Bsp19I	CCATGG	1 cut(s)	1386
BspACI	CCGC	7 cut(s)	326, 421, 433, 490, 1034, 1187, 1313
BspANI	GGCC	9 cut(s)	84, 154, 237, 536, 542, 605, 668, 1385, 1391
BspCNI	CTCAG	3 cut(s)	234, 468, 708
BspDI	ATCGAT	1 cut(s)	696
BspFNI	CGCG	3 cut(s)	492, 577, 1034
BspLI	GGNNCC	6 cut(s)	262, 412, 687, 786, 955, 1248
BspMI	ACCTGC	1 cut(s)	760
BspPI	GGATC	8 cut(s)	660, 680, 693, 835, 840, 1241, 1254, 1274
BspT104I	TTCGAA	1 cut(s)	908
BspT107I	GGYRCC	1 cut(s)	260
BspTNI	GGTCTC	1 cut(s)	928
BsrDI	GCAATG	1 cut(s)	507
BsrFI	RCCGGY	1 cut(s)	1287
BsrI	ACTGG	1 cut(s)	924
BssAI	RCCGGY	1 cut(s)	1287
BssECI	CCNNGG	7 cut(s)	537, 823, 1232, 1375, 1386, 1535, 1536
BssMI	GATC	8 cut(s)	273, 652, 685, 827, 832, 1246, 1279, 1527
BssNI	GRCGYC	2 cut(s)	288, 802
BssT1I	CCWWGG	2 cut(s)	537, 1386
Bst2UI	CCWGG	4 cut(s)	265, 466, 825, 1537
Bst4CI	ACNGT	6 cut(s)	391, 914, 950, 1051, 1396, 1498
Bst6I	CTCTTC	3 cut(s)	56, 176, 627
BstACI	GRCGYC	2 cut(s)	288, 802
BstBI	TTCGAA	1 cut(s)	908
BstC8I	GCNNGC	3 cut(s)	184, 194, 1104
BstDEI	CTNAG	6 cut(s)	64, 221, 455, 716, 1517, 1524
BstDSI	CCRYGG	1 cut(s)	1386
BstF5I	GGATG	2 cut(s)	155, 899
BstFNI	CGCG	3 cut(s)	492, 577, 1034
BstHHI	GCGC	1 cut(s)	579
BstKTI	GATC	8 cut(s)	276, 655, 688, 830, 835, 1249, 1282, 1530
BstMAI	GTCTC	1 cut(s)	928
BstMBI	GATC	8 cut(s)	273, 652, 685, 827, 832, 1246, 1279, 1527
BstMCI	CGRYCG	2 cut(s)	425, 1288
BstMWI	GCNNNNNNNGC	3 cut(s)	332, 1099, 1454
BstNI	CCWGG	4 cut(s)	265, 466, 825, 1537
BstSFI	CTRYAG	1 cut(s)	156
BstSLI	GKGCMC	2 cut(s)	263, 814
BstUI	CGCG	3 cut(s)	492, 577, 1034
BstV1I	GCAGC	1 cut(s)	362
BstX2I	RGATCY	2 cut(s)	685, 1246
BstXI	CCANNNNNNTGG	1 cut(s)	150
BstYI	RGATCY	2 cut(s)	685, 1246
Bsu15I	ATCGAT	1 cut(s)	696
BsuRI	GGCC	9 cut(s)	84, 154, 237, 536, 542, 605, 668, 1385, 1391
BsuTUI	ATCGAT	1 cut(s)	696
BtgI	CCRYGG	1 cut(s)	1386
BtrI	CACGTC	1 cut(s)	1081
BtsCI	GGATG	2 cut(s)	155, 899
BtsI	GCAGTG	1 cut(s)	1113
BtsIMutI	CAGTG	5 cut(s)	919, 1056, 1113, 1203, 1360
BveI	ACCTGC	1 cut(s)	760
Cac8I	GCNNGC	3 cut(s)	184, 194, 1104
CfoI	GCGC	1 cut(s)	579
Cfr10I	RCCGGY	1 cut(s)	1287
Cfr13I	GGNCC	7 cut(s)	140, 236, 267, 442, 784, 954, 1260
Cfr9I	CCCGGG	1 cut(s)	1232
ClaI	ATCGAT	1 cut(s)	696
CseI	GACGC	4 cut(s)	296, 475, 791, 900
Csp6I	GTAC	5 cut(s)	232, 1016, 1030, 1192, 1450
CspAI	ACCGGT	1 cut(s)	1287
CviAII	CATG	7 cut(s)	271, 439, 607, 1160, 1387, 1400, 1411
CviQI	GTAC	5 cut(s)	232, 1016, 1030, 1192, 1450
DdeI	CTNAG	6 cut(s)	64, 221, 455, 716, 1517, 1524
DpnI	GATC	8 cut(s)	275, 654, 687, 829, 834, 1248, 1281, 1529
DpnII	GATC	8 cut(s)	273, 652, 685, 827, 832, 1246, 1279, 1527
DrdI	GACNNNNNNGTC	1 cut(s)	512
DseDI	GACNNNNNNGTC	1 cut(s)	512
EaeI	YGGCCR	3 cut(s)	603, 1383, 1389
Eam1104I	CTCTTC	3 cut(s)	56, 176, 627
EarI	CTCTTC	3 cut(s)	56, 176, 627
EciI	GGCGGA	1 cut(s)	448
Ecl136II	GAGCTC	2 cut(s)	220, 749
Eco130I	CCWWGG	2 cut(s)	537, 1386
Eco24I	GRGCYC	2 cut(s)	222, 751
Eco31I	GGTCTC	1 cut(s)	928
Eco47I	GGWCC	6 cut(s)	140, 267, 442, 784, 954, 1260
Eco53kI	GAGCTC	2 cut(s)	220, 749
Eco57I	CTGAAG	1 cut(s)	355
Eco88I	CYCGRG	2 cut(s)	1232, 1268
EcoICRI	GAGCTC	2 cut(s)	220, 749
EcoRI	GAATTC	1 cut(s)	1510
EcoRII	CCWGG	4 cut(s)	263, 464, 823, 1535
EcoT14I	CCWWGG	2 cut(s)	537, 1386
EcoT38I	GRGCYC	2 cut(s)	222, 751
ErhI	CCWWGG	2 cut(s)	537, 1386
FaeI	CATG	7 cut(s)	274, 442, 610, 1163, 1390, 1403, 1414
FalI	AAGNNNNNCTT	2 cut(s)	185, 217
FaqI	GGGAC	3 cut(s)	705, 770, 967
FatI	CATG	7 cut(s)	270, 438, 606, 1159, 1386, 1399, 1410
FauI	CCCGC	1 cut(s)	1180
FbaI	TGATCA	1 cut(s)	273
FblI	GTMKAC	2 cut(s)	207, 330
Fnu4HI	GCNGC	1 cut(s)	376
FokI	GGATG	2 cut(s)	162, 886
FriOI	GRGCYC	2 cut(s)	222, 751
Fsp4HI	GCNGC	1 cut(s)	376
FspBI	CTAG	3 cut(s)	345, 512, 1419
GlaI	GCGC	1 cut(s)	578
GluI	GCNGC	1 cut(s)	376
GsuI	CTGGAG	1 cut(s)	998
HaeIII	GGCC	9 cut(s)	84, 154, 237, 536, 542, 605, 668, 1385, 1391
HgaI	GACGC	4 cut(s)	296, 475, 791, 900
HhaI	GCGC	1 cut(s)	579
Hin1I	GRCGYC	2 cut(s)	288, 802
Hin1II	CATG	7 cut(s)	274, 442, 610, 1163, 1390, 1403, 1414
Hin6I	GCGC	1 cut(s)	577
HinP1I	GCGC	1 cut(s)	577
HincII	GTYRAC	1 cut(s)	394
HindII	GTYRAC	1 cut(s)	394
HinfI	GANTC	3 cut(s)	247, 693, 718
HphI	GGTGA	5 cut(s)	91, 379, 1067, 1123, 1513
Hpy166II	GTNNAC	8 cut(s)	208, 301, 331, 387, 394, 917, 1006, 1069
Hpy188I	TCNGA	9 cut(s)	363, 482, 675, 717, 832, 937, 945, 1243, 1264
Hpy188III	TCNNGA	8 cut(s)	253, 445, 517, 752, 977, 1283, 1360, 1430
Hpy8I	GTNNAC	8 cut(s)	208, 301, 331, 387, 394, 917, 1006, 1069
Hpy99I	CGWCG	4 cut(s)	290, 551, 807, 810
HpyAV	CCTTC	6 cut(s)	208, 658, 733, 799, 915, 1108
HpyCH4III	ACNGT	6 cut(s)	391, 914, 950, 1051, 1396, 1498
HpyCH4IV	ACGT	2 cut(s)	639, 1080
HpyCH4V	TGCA	5 cut(s)	378, 500, 992, 1102, 1211
HpyF10VI	GCNNNNNNNGC	3 cut(s)	332, 1099, 1454
HpyF3I	CTNAG	6 cut(s)	64, 221, 455, 716, 1517, 1524
HpySE526I	ACGT	2 cut(s)	639, 1080
Hsp92I	GRCGYC	2 cut(s)	288, 802
Hsp92II	CATG	7 cut(s)	274, 442, 610, 1163, 1390, 1403, 1414
HspAI	GCGC	1 cut(s)	577
Ksp22I	TGATCA	1 cut(s)	273
Kzo9I	GATC	8 cut(s)	273, 652, 685, 827, 832, 1246, 1279, 1527
LmnI	GCTCC	4 cut(s)	191, 416, 766, 1117
Lsp1109I	GCAGC	1 cut(s)	362
LweI	GCATC	3 cut(s)	1198, 1300, 1335
MaeI	CTAG	3 cut(s)	345, 512, 1419
MaeII	ACGT	2 cut(s)	639, 1080
MaeIII	GTNAC	2 cut(s)	1165, 1327
MalI	GATC	8 cut(s)	275, 654, 687, 829, 834, 1248, 1281, 1529
MboI	GATC	8 cut(s)	273, 652, 685, 827, 832, 1246, 1279, 1527
MflI	RGATCY	2 cut(s)	685, 1246
MhlI	GDGCHC	4 cut(s)	222, 263, 751, 814
MlsI	TGGCCA	3 cut(s)	605, 1385, 1391
MluCI	AATT	4 cut(s)	987, 1253, 1490, 1510
MluNI	TGGCCA	3 cut(s)	605, 1385, 1391
MlyI	GAGTC	2 cut(s)	241, 727
MmeI	TCCRAC	3 cut(s)	663, 1287, 1449
Mox20I	TGGCCA	3 cut(s)	605, 1385, 1391
MscI	TGGCCA	3 cut(s)	605, 1385, 1391
MseI	TTAA	4 cut(s)	525, 1041, 1338, 1543
MslI	CAYNNNNRTG	1 cut(s)	148
Msp20I	TGGCCA	3 cut(s)	605, 1385, 1391
MspA1I	CMGCKG	1 cut(s)	375
MvaI	CCWGG	4 cut(s)	265, 466, 825, 1537
MvnI	CGCG	3 cut(s)	492, 577, 1034
MwoI	GCNNNNNNNGC	3 cut(s)	332, 1099, 1454
NciI	CCSGG	6 cut(s)	138, 147, 1233, 1234, 1377, 1454
NcoI	CCATGG	1 cut(s)	1386
NdeII	GATC	8 cut(s)	273, 652, 685, 827, 832, 1246, 1279, 1527
NlaIII	CATG	7 cut(s)	274, 442, 610, 1163, 1390, 1403, 1414
NlaIV	GGNNCC	6 cut(s)	262, 412, 687, 786, 955, 1248
NmuCI	GTSAC	2 cut(s)	1165, 1327
NspV	TTCGAA	1 cut(s)	908
PaqCI	CACCTGC	1 cut(s)	760
PasI	CCCWGGG	1 cut(s)	1536
PcsI	WCGNNNNNNNCGW	5 cut(s)	294, 627, 636, 954, 1077
PfeI	GAWTC	1 cut(s)	693
PflMI	CCANNNNNTGG	1 cut(s)	1257
PfoI	TCCNGGA	1 cut(s)	136
PinAI	ACCGGT	1 cut(s)	1287
PkrI	GCNGC	1 cut(s)	377
PleI	GAGTC	2 cut(s)	241, 726
PpsI	GAGTC	2 cut(s)	241, 726
PshBI	ATTAAT	1 cut(s)	525
Psp124BI	GAGCTC	2 cut(s)	222, 751
Psp6I	CCWGG	4 cut(s)	263, 464, 823, 1535
PspGI	CCWGG	4 cut(s)	263, 464, 823, 1535
PspN4I	GGNNCC	6 cut(s)	262, 412, 687, 786, 955, 1248
PspPI	GGNCC	7 cut(s)	140, 236, 267, 442, 784, 954, 1260
PsuI	RGATCY	2 cut(s)	685, 1246
PvuII	CAGCTG	1 cut(s)	375
RsaI	GTAC	5 cut(s)	233, 1017, 1031, 1193, 1451
RsaNI	GTAC	5 cut(s)	232, 1016, 1030, 1192, 1450
RseI	CAYNNNNRTG	1 cut(s)	148
SacI	GAGCTC	2 cut(s)	222, 751
SaqAI	TTAA	4 cut(s)	525, 1041, 1338, 1543
SatI	GCNGC	1 cut(s)	376
Sau3AI	GATC	8 cut(s)	273, 652, 685, 827, 832, 1246, 1279, 1527
Sau96I	GGNCC	7 cut(s)	140, 236, 267, 442, 784, 954, 1260
SchI	GAGTC	2 cut(s)	241, 727
SduI	GDGCHC	4 cut(s)	222, 263, 751, 814
SfaNI	GCATC	3 cut(s)	1198, 1300, 1335
SfcI	CTRYAG	1 cut(s)	156
SfuI	TTCGAA	1 cut(s)	908
SinI	GGWCC	6 cut(s)	140, 267, 442, 784, 954, 1260
SmaI	CCCGGG	1 cut(s)	1234
SmiMI	CAYNNNNRTG	1 cut(s)	148
SmlI	CTYRAG	3 cut(s)	227, 251, 1011
SmoI	CTYRAG	3 cut(s)	227, 251, 1011
SpeI	ACTAGT	1 cut(s)	511
Sse9I	AATT	4 cut(s)	987, 1253, 1490, 1510
SsiI	CCGC	7 cut(s)	326, 421, 433, 490, 1034, 1187, 1313
SspI	AATATT	1 cut(s)	243
SspMI	CTAG	3 cut(s)	345, 512, 1419
SstI	GAGCTC	2 cut(s)	222, 751
StyI	CCWWGG	2 cut(s)	537, 1386
TaaI	ACNGT	6 cut(s)	391, 914, 950, 1051, 1396, 1498
TaiI	ACGT	2 cut(s)	642, 1083
TaqII	GACCGA	2 cut(s)	971, 1184
TasI	AATT	4 cut(s)	987, 1253, 1490, 1510
TatI	WGTACW	1 cut(s)	1015
TfiI	GAWTC	1 cut(s)	693
Tru1I	TTAA	4 cut(s)	525, 1041, 1338, 1543
Tru9I	TTAA	4 cut(s)	525, 1041, 1338, 1543
TscAI	CASTG	5 cut(s)	919, 1056, 1113, 1210, 1360
TseFI	GTSAC	2 cut(s)	1165, 1327
TseI	GCWGC	1 cut(s)	375
Tsp45I	GTSAC	2 cut(s)	1165, 1327
TspDTI	ATGAA	6 cut(s)	677, 781, 837, 1388, 1394, 1520
TspGWI	ACGGA	2 cut(s)	403, 550
TspMI	CCCGGG	1 cut(s)	1232
TspRI	CASTG	5 cut(s)	919, 1056, 1113, 1210, 1360
Van91I	CCANNNNNTGG	1 cut(s)	1257
VpaK11BI	GGWCC	6 cut(s)	140, 267, 442, 784, 954, 1260
VspI	ATTAAT	1 cut(s)	525
XapI	RAATTY	2 cut(s)	1490, 1510
XmaI	CCCGGG	1 cut(s)	1232
XmiI	GTMKAC	2 cut(s)	207, 330
XspI	CTAG	3 cut(s)	345, 512, 1419

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.