Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2B

Orthogroup ID

OG0010513

Physical Location & Seq

Genomic Coordinates Reverse (-)

3764807 .. 3769950

Gene Structure 5144 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2BG053000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1854 bp

ATGCATGTTCGTGGTAAAAGTTTCGATGACTCTGATCCATTTGTGTCGACCAACAAACTTACAAGCAGATCACGAGGTCTGCCTGAGAATAATCTTCTCAAGAGTGTGTCGATCGATAAAGAAAGGGCCAACAGTGTTGCCAAGATCAAAGTTGTGGTGCGCAAGAGGCCACTAAATAAAAAGGAAATTGCGAAGAAAGAGGAAGACATCATTACAATAGAACCAAATTCTAATGCTCTCACAGTTCATGAGACAAAACTTAAGGTTGACTTAACAGCATATGAGGAGAAGCATGAATTTGTTTTTGATGCCGTTCTGGATGAAGATGTTTCAAATGATGAAGTATACTTTGAAAGTGTGGAACCCATAGTTCCGCTGATTTTCCAACGAACAAAAGCAACTTGCTTTGCATATGGGCAAACAGGTAGTGGAAAGACTTATACCATGCAACCACTGCCCATTAAAGCAGCCCAAGATATCTTAAGACTAATGCTGAATTCCTATCGAAACCAAGGCTTTCAGTTATTCGTGAGTTTCTTCGAGATATATGGAGGAAAACTTTTTGATCTCCTAAATGATCGGAAGAAACTTTTCATGAGGGAGGATGGTAAACAGCAAGTGTGTATCGTTGGGTTGCAAGAGTACAAGGTGTCAAATGTTGAGACAGTCAAGGAGTTGATTGAGAAGGGAAATTCCACAAGAAGTACTGGTACAACTGGTGCAAATGAAGAATCTTCCCGATCACATGCGATACTTCAGCTTTGTATCAAGAGATCAGCGGATGGAAATGAATCAAAGCCTGCCAGACTTGTAGGAAAGCTGTCTTTCATAGACCTTGCTGGAAGTGAACGCGGTGCAGATACAACAGATAATGATAAACAAACAAGAATGGAAGGTGCTGAAATTAATAAAAGCTTACTTGCTCTAAAAGAATGCATTAGAGCTCTGGACAACGACCAAGGTCACATTCCTTTCAGAGGGAGTAAACTCACCGAAGTTCTTAGAGATTCATTTGTAGGCGACTCACGCACAGTTATGATATCATGCATTTCACCAAGCACAGGATCATGTGAACACACTCTTAACACACTAAGATATGCTGACAGGGTGAAGAGTTTGTCGAAAGGGATCAGCTCCAGAAAGCAACAACTATCTTCATCTTCAAACCTTAGAGAGTCAACAACATTGCCTTTGTCTTCATCTTTATCAACTGATACAACCTCTGAGGATAACACGCTATCTGTTCCTCAAGAAAAGAGCAGCTTTGGTTGGTCCAAACAGATTGACCGAGAACCCTCCCCCCAGTACGTCGTGAATCGCGTACCCAGTGGGAGGGCAGAAGGACGTTTGCCTGCATCTGTATATTCAGATTCTTACAAGGATCAGATAGGTGGTCAAAGTACCATAGGCGAAGATGACTTTGACTACTCTGATCAGATTTATGAGAAAGAGAGACCATCGTGGCCAAATAGTAAGAAGGTACAAAGCTACCAGACATCAGCTGTGGAGGAAAAGAGAAAGACTGGCAGTCAGGTGAAATGGAGGGATCAGCCTGATTCTGAGGCTATCAACTCTAATTCCGATGATGATCTAATTGCTGTATTGCAGGAAGAGGATGACCTTGTGACCGCTCACCGAAGACAAGTAGAGCAGACAATAGATATTGTTAGGGAGGAGATGAATTTGCTGGTTGAAGCAGATCAACCAGGCAATCGACTTGATGATTATATCTTCAAATTGGATGCAATACTCTCTCAGAAGGCCGAAGGAATTCAACAACTGCAGACACAGCTGGCTCAATTCCAGAAGCATCTAAATGAGCACAATGTCTTGGTATCATCTTCAAGTAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0000278 GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005813 GO:0005815 GO:0005856 GO:0005871 GO:0005875 GO:0005886 GO:0006928 GO:0006996 GO:0007010 GO:0007017 GO:0007018 GO:0007049 GO:0007051 GO:0007052 GO:0008150 GO:0009987 GO:0015630 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022402 GO:0032991 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:0050789 GO:0050794 GO:0065007 GO:0071840 GO:0071944 GO:1902850 GO:1903047 GO:1903338

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Kinesin

Protein Analysis

617

Amino Acids

69.18

Weight (kDa)

5.58

Isoelectric Point (pI)

45.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Microtub_bd	PF16796	48 - 191	6.1e-14	Microtubule binding
Kinesin	PF00225	54 - 372	8.4e-100	Kinesin motor domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010513)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g04820 FvH4_1g04820 FvH4_1g04820 FvH4_1g04820 FvH4_1g04820 FvH4_1g04820
malus_domestica	MD02G1047000.v1.1 MD15G1185900.v1.1
prunus_persica	Prupe.7G231000_v2.0.a1
pyrus_communis	pycom02g03930
rosa_chinensis	RchiOBHm_Chr2g0090451
rosa_laevigata	RLG00000016111
rosa_multiflora	Rmu_sc0004514.1_g000020
rosa_roxburghii	Rroxscaffold_2G00151120
rosa_rugosa	Rorug02G0008100 Rorug02G0008100
rosa_samantha	Rh2AG053600 Rh2BG053000 Rh2CG055000 Rh2DG053800
rosa_wichuraiana	Rw2G004340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	161
AccBSI	CCGCTC	1 cut(s)	1631
AccI	GTMKAC	2 cut(s)	47, 345
AccII	CGCG	2 cut(s)	852, 1320
AciI	CCGC	4 cut(s)	374, 779, 852, 1629
AclWI	GGATC	5 cut(s)	29, 1072, 1136, 1389, 1554
AcoI	YGGCCR	1 cut(s)	1463
AcsI	RAATTY	6 cut(s)	226, 296, 496, 691, 1681, 1770
AcuI	CTGAAG	1 cut(s)	740
AfaI	GTAC	7 cut(s)	644, 706, 712, 1307, 1323, 1402, 1482
AfiI	CCNNNNNNNGG	3 cut(s)	977, 1061, 1332
AflII	CTTAAG	2 cut(s)	260, 481
AgsI	TTSAA	7 cut(s)	333, 353, 1164, 1694, 1735, 1775, 1845
AhdI	GACNNNNNGTC	1 cut(s)	1527
AjnI	CCWGG	1 cut(s)	1705
AjuI	GAANNNNNNNTTGG	2 cut(s)	951, 983
AluBI	AGCT	9 cut(s)	760, 820, 915, 944, 1134, 1263, 1488, 1502, 1792
AluI	AGCT	9 cut(s)	760, 820, 915, 944, 1134, 1263, 1488, 1502, 1792
Alw21I	GWGCWC	2 cut(s)	946, 1824
Alw26I	GTCTC	3 cut(s)	245, 656, 1447
AlwI	GGATC	5 cut(s)	29, 1072, 1136, 1389, 1554
AoxI	GGCC	4 cut(s)	126, 167, 1463, 1761
ApeKI	GCWGC	2 cut(s)	467, 1260
ApoI	RAATTY	6 cut(s)	226, 296, 496, 691, 1681, 1770
AseI	ATTAAT	1 cut(s)	906
Asp700I	GAANNNNTTC	2 cut(s)	590, 1770
AspLEI	GCGC	1 cut(s)	162
AspS9I	GGNCC	2 cut(s)	126, 1272
AsuHPI	GGTGA	5 cut(s)	982, 1044, 1120, 1546, 1625
AvaII	GGWCC	1 cut(s)	1272
BalI	TGGCCA	1 cut(s)	1465
BanII	GRGCYC	1 cut(s)	946
BarI	GAAGNNNNNNTAC	2 cut(s)	694, 726
BauI	CACGAG	1 cut(s)	72
BbsI	GAAGAC	3 cut(s)	210, 1188, 1645
Bbv12I	GWGCWC	2 cut(s)	946, 1824
BbvI	GCAGC	2 cut(s)	479, 1272
BccI	CCATC	3 cut(s)	599, 776, 1465
BceAI	ACGGC	1 cut(s)	296
BciT130I	CCWGG	1 cut(s)	1707
BclI	TGATCA	1 cut(s)	1432
BcoDI	GTCTC	3 cut(s)	245, 656, 1447
BfmI	CTRYAG	1 cut(s)	1781
BfrI	CTTAAG	2 cut(s)	260, 481
BisI	GCNGC	2 cut(s)	468, 1261
BlsI	GCNGC	2 cut(s)	469, 1262
BmcAI	AGTACT	1 cut(s)	706
Bme1390I	CCNGG	1 cut(s)	1707
Bme18I	GGWCC	1 cut(s)	1272
BmeRI	GACNNNNNGTC	1 cut(s)	1527
BmgT120I	GGNCC	2 cut(s)	126, 1272
BmiI	GGNNCC	1 cut(s)	363
BmrFI	CCNGG	1 cut(s)	1707
BmrI	ACTGGG	2 cut(s)	1297, 1320
BmsI	GCATC	4 cut(s)	298, 1364, 1732, 1819
BmuI	ACTGGG	2 cut(s)	1297, 1320
BoxI	GACNNNNGTC	1 cut(s)	960
BpiI	GAAGAC	3 cut(s)	210, 1188, 1645
BpmI	CTGGAG	1 cut(s)	1120
BpuEI	CTTGAG	2 cut(s)	83, 1233
Bsa29I	ATCGAT	1 cut(s)	114
BsaBI	GATNNNNATC	1 cut(s)	1587
BsaI	GGTCTC	1 cut(s)	1447
BsaJI	CCNNGG	2 cut(s)	511, 958
Bsc4I	CCNNNNNNNGG	3 cut(s)	977, 1061, 1332
Bse1I	ACTGG	5 cut(s)	712, 721, 1303, 1326, 1528
Bse3DI	GCAATG	1 cut(s)	1184
Bse8I	GATNNNNATC	1 cut(s)	1587
BseBI	CCWGG	1 cut(s)	1707
BseCI	ATCGAT	1 cut(s)	114
BseDI	CCNNGG	2 cut(s)	511, 958
BseGI	GGATG	5 cut(s)	325, 610, 787, 1621, 1747
BseJI	GATNNNNATC	1 cut(s)	1587
BseLI	CCNNNNNNNGG	3 cut(s)	977, 1061, 1332
BseMI	GCAATG	1 cut(s)	1184
BseMII	CTCAG	4 cut(s)	75, 1215, 1551, 1769
BseNI	ACTGG	5 cut(s)	712, 721, 1303, 1326, 1528
BseRI	GAGGAG	2 cut(s)	299, 1688
BseXI	GCAGC	2 cut(s)	479, 1272
BsgI	GTGCAG	1 cut(s)	876
Bsh1236I	CGCG	2 cut(s)	852, 1320
Bsh1285I	CGRYCG	1 cut(s)	114
BshFI	GGCC	4 cut(s)	128, 169, 1465, 1763
BshVI	ATCGAT	1 cut(s)	114
BsiEI	CGRYCG	1 cut(s)	114
BsiHKAI	GWGCWC	2 cut(s)	946, 1824
BslI	CCNNNNNNNGG	3 cut(s)	977, 1061, 1332
BsmAI	GTCTC	3 cut(s)	245, 656, 1447
BsmI	GAATGC	1 cut(s)	938
BsnI	GGCC	4 cut(s)	128, 169, 1465, 1763
Bso31I	GGTCTC	1 cut(s)	1447
Bsp1286I	GDGCHC	2 cut(s)	946, 1824
BspACI	CCGC	4 cut(s)	374, 779, 852, 1629
BspANI	GGCC	4 cut(s)	128, 169, 1465, 1763
BspCNI	CTCAG	4 cut(s)	76, 1216, 1552, 1768
BspDI	ATCGAT	1 cut(s)	114
BspFNI	CGCG	2 cut(s)	852, 1320
BspHI	TCATGA	2 cut(s)	247, 594
BspLI	GGNNCC	1 cut(s)	363
BspMAI	CTGCAG	1 cut(s)	1785
BspPI	GGATC	5 cut(s)	29, 1072, 1136, 1389, 1554
BspTI	CTTAAG	2 cut(s)	260, 481
BspTNI	GGTCTC	1 cut(s)	1447
BsrBI	CCGCTC	1 cut(s)	1631
BsrDI	GCAATG	1 cut(s)	1184
BsrI	ACTGG	5 cut(s)	712, 721, 1303, 1326, 1528
BssECI	CCNNGG	2 cut(s)	511, 958
BssNAI	GTATAC	1 cut(s)	346
BssSI	CACGAG	1 cut(s)	72
BssT1I	CCWWGG	2 cut(s)	511, 958
Bst1107I	GTATAC	1 cut(s)	346
Bst2BI	CACGAG	1 cut(s)	72
Bst2UI	CCWGG	1 cut(s)	1707
Bst4CI	ACNGT	4 cut(s)	134, 244, 667, 1033
Bst6I	CTCTTC	2 cut(s)	1106, 1605
BstAFI	CTTAAG	2 cut(s)	260, 481
BstAPI	GCANNNNNTGC	1 cut(s)	454
BstC8I	GCNNGC	3 cut(s)	801, 1353, 1794
BstDEI	CTNAG	7 cut(s)	84, 1001, 1091, 1169, 1224, 1560, 1755
BstENI	CCTNNNNNAGG	1 cut(s)	975
BstF5I	GGATG	5 cut(s)	325, 610, 787, 1621, 1747
BstFNI	CGCG	2 cut(s)	852, 1320
BstHHI	GCGC	1 cut(s)	162
BstMAI	GTCTC	3 cut(s)	245, 656, 1447
BstMCI	CGRYCG	1 cut(s)	114
BstMWI	GCNNNNNNNGC	4 cut(s)	166, 454, 1026, 1789
BstNI	CCWGG	1 cut(s)	1707
BstNSI	RCATGY	2 cut(s)	8, 749
BstPAI	GACNNNNGTC	1 cut(s)	960
BstSCI	CCNGG	1 cut(s)	1705
BstSFI	CTRYAG	1 cut(s)	1781
BstUI	CGCG	2 cut(s)	852, 1320
BstV1I	GCAGC	2 cut(s)	479, 1272
BstV2I	GAAGAC	3 cut(s)	210, 1188, 1645
BstZ17I	GTATAC	1 cut(s)	346
Bsu15I	ATCGAT	1 cut(s)	114
BsuRI	GGCC	4 cut(s)	128, 169, 1465, 1763
BsuTUI	ATCGAT	1 cut(s)	114
BtsCI	GGATG	5 cut(s)	325, 610, 787, 1621, 1747
BtsI	GCAGTG	1 cut(s)	452
BtsIMutI	CAGTG	3 cut(s)	139, 452, 1333
Cac8I	GCNNGC	3 cut(s)	801, 1353, 1794
CciI	TCATGA	2 cut(s)	247, 594
CfoI	GCGC	1 cut(s)	162
Cfr13I	GGNCC	2 cut(s)	126, 1272
ClaI	ATCGAT	1 cut(s)	114
Csp6I	GTAC	7 cut(s)	643, 705, 711, 1306, 1322, 1401, 1481
CviAII	CATG	8 cut(s)	5, 248, 293, 445, 595, 746, 1044, 1068
CviQI	GTAC	7 cut(s)	643, 705, 711, 1306, 1322, 1401, 1481
DdeI	CTNAG	7 cut(s)	84, 1001, 1091, 1169, 1224, 1560, 1755
DriI	GACNNNNNGTC	1 cut(s)	1527
EaeI	YGGCCR	1 cut(s)	1463
Eam1104I	CTCTTC	2 cut(s)	1106, 1605
Eam1105I	GACNNNNNGTC	1 cut(s)	1527
EarI	CTCTTC	2 cut(s)	1106, 1605
Ecl136II	GAGCTC	1 cut(s)	944
Eco130I	CCWWGG	2 cut(s)	511, 958
Eco24I	GRGCYC	1 cut(s)	946
Eco31I	GGTCTC	1 cut(s)	1447
Eco32I	GATATC	2 cut(s)	478, 1041
Eco47I	GGWCC	1 cut(s)	1272
Eco53kI	GAGCTC	1 cut(s)	944
Eco57I	CTGAAG	1 cut(s)	740
EcoICRI	GAGCTC	1 cut(s)	944
EcoNI	CCTNNNNNAGG	1 cut(s)	975
EcoRI	GAATTC	2 cut(s)	496, 1770
EcoRII	CCWGG	1 cut(s)	1705
EcoRV	GATATC	2 cut(s)	478, 1041
EcoT14I	CCWWGG	2 cut(s)	511, 958
EcoT22I	ATGCAT	3 cut(s)	6, 938, 1049
EcoT38I	GRGCYC	1 cut(s)	946
ErhI	CCWWGG	2 cut(s)	511, 958
FaeI	CATG	8 cut(s)	8, 251, 296, 448, 598, 749, 1047, 1071
FalI	AAGNNNNNCTT	4 cut(s)	254, 286, 1247, 1279
FatI	CATG	8 cut(s)	4, 247, 292, 444, 594, 745, 1043, 1067
FauNDI	CATATG	2 cut(s)	280, 412
FbaI	TGATCA	1 cut(s)	1432
FblI	GTMKAC	2 cut(s)	47, 345
Fnu4HI	GCNGC	2 cut(s)	468, 1261
FokI	GGATG	5 cut(s)	332, 617, 794, 1628, 1754
FriOI	GRGCYC	1 cut(s)	946
Fsp4HI	GCNGC	2 cut(s)	468, 1261
FspI	TGCGCA	1 cut(s)	161
GlaI	GCGC	1 cut(s)	161
GluI	GCNGC	2 cut(s)	468, 1261
GsuI	CTGGAG	1 cut(s)	1120
HaeIII	GGCC	4 cut(s)	128, 169, 1465, 1763
HhaI	GCGC	1 cut(s)	162
Hin1II	CATG	8 cut(s)	8, 251, 296, 448, 598, 749, 1047, 1071
Hin6I	GCGC	1 cut(s)	160
HinP1I	GCGC	1 cut(s)	160
HincII	GTYRAC	3 cut(s)	48, 268, 1179
HindII	GTYRAC	3 cut(s)	48, 268, 1179
HindIII	AAGCTT	1 cut(s)	913
HinfI	GANTC	9 cut(s)	29, 731, 791, 1007, 1022, 1175, 1315, 1370, 1556
HphI	GGTGA	5 cut(s)	982, 1044, 1120, 1546, 1625
Hpy166II	GTNNAC	8 cut(s)	48, 268, 346, 611, 848, 986, 1073, 1179
Hpy8I	GTNNAC	8 cut(s)	48, 268, 346, 611, 848, 986, 1073, 1179
Hpy99I	CGWCG	1 cut(s)	1313
HpyAV	CCTTC	6 cut(s)	679, 887, 1334, 1471, 1753, 1760
HpyCH4III	ACNGT	4 cut(s)	134, 244, 667, 1033
HpyCH4IV	ACGT	2 cut(s)	1308, 1345
HpyF10VI	GCNNNNNNNGC	4 cut(s)	166, 454, 1026, 1789
HpyF3I	CTNAG	7 cut(s)	84, 1001, 1091, 1169, 1224, 1560, 1755
HpySE526I	ACGT	2 cut(s)	1308, 1345
Hsp92II	CATG	8 cut(s)	8, 251, 296, 448, 598, 749, 1047, 1071
HspAI	GCGC	1 cut(s)	160
Ksp22I	TGATCA	1 cut(s)	1432
LmnI	GCTCC	1 cut(s)	1139
Lsp1109I	GCAGC	2 cut(s)	479, 1272
LweI	GCATC	4 cut(s)	298, 1364, 1732, 1819
MaeII	ACGT	2 cut(s)	1308, 1345
MaeIII	GTNAC	2 cut(s)	962, 1624
MbiI	CCGCTC	1 cut(s)	1631
MhlI	GDGCHC	2 cut(s)	946, 1824
MlsI	TGGCCA	1 cut(s)	1465
MluNI	TGGCCA	1 cut(s)	1465
MlyI	GAGTC	3 cut(s)	23, 1016, 1184
MmeI	TCCRAC	1 cut(s)	409
Mox20I	TGGCCA	1 cut(s)	1465
Mph1103I	ATGCAT	3 cut(s)	6, 938, 1049
MroXI	GAANNNNTTC	2 cut(s)	590, 1770
MscI	TGGCCA	1 cut(s)	1465
MseI	TTAA	6 cut(s)	261, 272, 462, 482, 906, 1083
MslI	CAYNNNNRTG	3 cut(s)	9, 1034, 1815
Msp20I	TGGCCA	1 cut(s)	1465
MspA1I	CMGCKG	4 cut(s)	376, 779, 1502, 1792
MspCI	CTTAAG	2 cut(s)	260, 481
MspR9I	CCNGG	1 cut(s)	1707
Mva1269I	GAATGC	1 cut(s)	938
MvaI	CCWGG	1 cut(s)	1707
MvnI	CGCG	2 cut(s)	852, 1320
MwoI	GCNNNNNNNGC	4 cut(s)	166, 454, 1026, 1789
NdeI	CATATG	2 cut(s)	280, 412
NlaIII	CATG	8 cut(s)	8, 251, 296, 448, 598, 749, 1047, 1071
NlaIV	GGNNCC	1 cut(s)	363
NmuCI	GTSAC	2 cut(s)	962, 1624
NsbI	TGCGCA	1 cut(s)	161
NsiI	ATGCAT	3 cut(s)	6, 938, 1049
NspI	RCATGY	2 cut(s)	8, 749
PagI	TCATGA	2 cut(s)	247, 594
PcsI	WCGNNNNNNNCGW	1 cut(s)	1317
PctI	GAATGC	1 cut(s)	938
PdmI	GAANNNNTTC	2 cut(s)	590, 1770
PfeI	GAWTC	6 cut(s)	731, 791, 1007, 1315, 1370, 1556
PkrI	GCNGC	2 cut(s)	469, 1262
Ple19I	CGATCG	1 cut(s)	114
PleI	GAGTC	3 cut(s)	23, 1016, 1183
PpsI	GAGTC	3 cut(s)	23, 1016, 1183
PshAI	GACNNNNGTC	1 cut(s)	960
PshBI	ATTAAT	1 cut(s)	906
Psp124BI	GAGCTC	1 cut(s)	946
Psp6I	CCWGG	1 cut(s)	1705
PspGI	CCWGG	1 cut(s)	1705
PspN4I	GGNNCC	1 cut(s)	363
PspPI	GGNCC	2 cut(s)	126, 1272
PstI	CTGCAG	1 cut(s)	1785
PvuI	CGATCG	1 cut(s)	114
PvuII	CAGCTG	2 cut(s)	1502, 1792
RsaI	GTAC	7 cut(s)	644, 706, 712, 1307, 1323, 1402, 1482
RsaNI	GTAC	7 cut(s)	643, 705, 711, 1306, 1322, 1401, 1481
RseI	CAYNNNNRTG	3 cut(s)	9, 1034, 1815
SacI	GAGCTC	1 cut(s)	946
SalI	GTCGAC	1 cut(s)	46
SaqAI	TTAA	6 cut(s)	261, 272, 462, 482, 906, 1083
SatI	GCNGC	2 cut(s)	468, 1261
Sau96I	GGNCC	2 cut(s)	126, 1272
ScaI	AGTACT	1 cut(s)	706
SchI	GAGTC	3 cut(s)	23, 1016, 1184
ScrFI	CCNGG	1 cut(s)	1707
SduI	GDGCHC	2 cut(s)	946, 1824
SfaNI	GCATC	4 cut(s)	298, 1364, 1732, 1819
SfcI	CTRYAG	1 cut(s)	1781
SinI	GGWCC	1 cut(s)	1272
SmiMI	CAYNNNNRTG	3 cut(s)	9, 1034, 1815
SmlI	CTYRAG	4 cut(s)	98, 260, 481, 1248
SmoI	CTYRAG	4 cut(s)	98, 260, 481, 1248
SsiI	CCGC	4 cut(s)	374, 779, 852, 1629
SstI	GAGCTC	1 cut(s)	946
StyD4I	CCNGG	1 cut(s)	1705
StyI	CCWWGG	2 cut(s)	511, 958
TaaI	ACNGT	4 cut(s)	134, 244, 667, 1033
TaiI	ACGT	2 cut(s)	1311, 1348
TaqI	TCGA	8 cut(s)	24, 47, 110, 114, 505, 540, 1121, 1714
TaqII	GACCGA	1 cut(s)	1302
TatI	WGTACW	2 cut(s)	642, 704
TfiI	GAWTC	6 cut(s)	731, 791, 1007, 1315, 1370, 1556
Tru1I	TTAA	6 cut(s)	261, 272, 462, 482, 906, 1083
Tru9I	TTAA	6 cut(s)	261, 272, 462, 482, 906, 1083
TscAI	CASTG	3 cut(s)	139, 459, 1333
TseFI	GTSAC	2 cut(s)	962, 1624
TseI	GCWGC	2 cut(s)	467, 1260
Tsp45I	GTSAC	2 cut(s)	962, 1624
TspRI	CASTG	3 cut(s)	139, 459, 1333
Vha464I	CTTAAG	2 cut(s)	260, 481
VpaK11BI	GGWCC	1 cut(s)	1272
VspI	ATTAAT	1 cut(s)	906
XagI	CCTNNNNNAGG	1 cut(s)	975
XapI	RAATTY	6 cut(s)	226, 296, 496, 691, 1681, 1770
XceI	RCATGY	2 cut(s)	8, 749
XmiI	GTMKAC	2 cut(s)	47, 345
XmnI	GAANNNNTTC	2 cut(s)	590, 1770
ZrmI	AGTACT	1 cut(s)	706
Zsp2I	ATGCAT	3 cut(s)	6, 938, 1049

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.