Rh2BG213600

phosphatase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Forward (+)
20284727 .. 20285784
1058 bp
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UTR
Exon/CDS
Intron
Rh2BG213600.1

Sequence Viewer

Length: 270 bp
ATGCTGGTTGGGATACCAACAATACTTATTTTGAAGTTCTGTAGTAAAGCTCTTGCTAAATGCATTCTTCCTGTGGTAAGCTACACCTTGGGCATCCCAATAAAATCAAGTAATGGGAAAAAATTAGATGGGTTGAAGCACTCAGGTTATCTCCAGAAGCTGTACCTTTTCTCCAGCCAGGACTCATTTATTGTCGATGCTAGCATAAGATTCATTCAATATATATTCTGCCCTTGCATGGTCAGGTTAGAGAAGGAAGATGTAATATAA

Protein Analysis

89

Amino Acids

9.97

Weight (kDa)

9.16

Isoelectric Point (pI)

26.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0024815)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr2g0108301
rosa_multiflora Rmu_co8334817.1_g000001
rosa_samantha Rh2BG213600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 1 cut(s) 164
AfiI CCNNNNNNNGG 1 cut(s) 238
AgsI TTSAA 3 cut(s) 34, 136, 218
AjnI CCWGG 1 cut(s) 177
AluBI AGCT 3 cut(s) 50, 81, 160
AluI AGCT 3 cut(s) 50, 81, 160
AlwNI CAGNNNCTG 1 cut(s) 160
AsuNHI GCTAGC 1 cut(s) 200
BccI CCATC 1 cut(s) 122
BciT130I CCWGG 1 cut(s) 179
BciVI GTATCC 1 cut(s) 6
BfaI CTAG 1 cut(s) 201
BfmI CTRYAG 1 cut(s) 40
BfuI GTATCC 1 cut(s) 6
Bme1390I CCNGG 1 cut(s) 179
BmrFI CCNGG 1 cut(s) 179
BmsI GCATC 2 cut(s) 102, 187
BmtI GCTAGC 1 cut(s) 204
BpmI CTGGAG 2 cut(s) 137, 157
BsaJI CCNNGG 1 cut(s) 87
BsaXI ACNNNNNCTCC 2 cut(s) 155, 185
Bsc4I CCNNNNNNNGG 1 cut(s) 238
BseBI CCWGG 1 cut(s) 179
BseDI CCNNGG 1 cut(s) 87
BseGI GGATG 1 cut(s) 93
BseLI CCNNNNNNNGG 1 cut(s) 238
BseMII CTCAG 1 cut(s) 156
BslI CCNNNNNNNGG 1 cut(s) 238
BsmI GAATGC 1 cut(s) 63
BspCNI CTCAG 1 cut(s) 155
BspOI GCTAGC 1 cut(s) 204
BssECI CCNNGG 1 cut(s) 87
BssT1I CCWWGG 1 cut(s) 87
Bst2UI CCWGG 1 cut(s) 179
BstC8I GCNNGC 1 cut(s) 202
BstDEI CTNAG 1 cut(s) 142
BstF5I GGATG 1 cut(s) 93
BstNI CCWGG 1 cut(s) 179
BstSCI CCNGG 1 cut(s) 177
BstSFI CTRYAG 1 cut(s) 40
BsuI GTATCC 1 cut(s) 6
BtsCI GGATG 1 cut(s) 93
Cac8I GCNNGC 1 cut(s) 202
CaiI CAGNNNCTG 1 cut(s) 160
Csp6I GTAC 1 cut(s) 163
CviAII CATG 1 cut(s) 238
CviJI RGCY 4 cut(s) 50, 81, 160, 177
CviKI_1 RGCY 4 cut(s) 50, 81, 160, 177
CviQI GTAC 1 cut(s) 163
DdeI CTNAG 1 cut(s) 142
Eco130I CCWWGG 1 cut(s) 87
EcoRII CCWGG 1 cut(s) 177
EcoT14I CCWWGG 1 cut(s) 87
EcoT22I ATGCAT 1 cut(s) 65
ErhI CCWWGG 1 cut(s) 87
FaeI CATG 1 cut(s) 241
FaiI YATR 5 cut(s) 206, 222, 224, 239, 268
FatI CATG 1 cut(s) 237
FokI GGATG 1 cut(s) 80
FspBI CTAG 1 cut(s) 201
GsuI CTGGAG 2 cut(s) 137, 157
Hin1II CATG 1 cut(s) 241
HinfI GANTC 2 cut(s) 182, 210
Hpy188III TCNNGA 1 cut(s) 154
HpyAV CCTTC 1 cut(s) 247
HpyCH4V TGCA 2 cut(s) 63, 237
HpyF3I CTNAG 1 cut(s) 142
Hsp92II CATG 1 cut(s) 241
LpnPI CCDG 7 cut(s) 84, 129, 164, 167, 187, 191, 229
LweI GCATC 2 cut(s) 102, 187
MaeI CTAG 1 cut(s) 201
MboII GAAGA 2 cut(s) 59, 269
MluCI AATT 1 cut(s) 122
MlyI GAGTC 1 cut(s) 176
Mph1103I ATGCAT 1 cut(s) 65
MspR9I CCNGG 1 cut(s) 179
Mva1269I GAATGC 1 cut(s) 63
MvaI CCWGG 1 cut(s) 179
NheI GCTAGC 1 cut(s) 200
NlaIII CATG 1 cut(s) 241
NsiI ATGCAT 1 cut(s) 65
PctI GAATGC 1 cut(s) 63
PfeI GAWTC 1 cut(s) 210
PleI GAGTC 1 cut(s) 176
PpsI GAGTC 1 cut(s) 176
Psp6I CCWGG 1 cut(s) 177
PspGI CCWGG 1 cut(s) 177
PstNI CAGNNNCTG 1 cut(s) 160
RsaI GTAC 1 cut(s) 164
RsaNI GTAC 1 cut(s) 163
SchI GAGTC 1 cut(s) 176
ScrFI CCNGG 1 cut(s) 179
SetI ASST 7 cut(s) 52, 83, 89, 148, 162, 168, 248
SfaNI GCATC 2 cut(s) 102, 187
SfcI CTRYAG 1 cut(s) 40
Sse9I AATT 1 cut(s) 122
SspMI CTAG 1 cut(s) 201
StyD4I CCNGG 1 cut(s) 177
StyI CCWWGG 1 cut(s) 87
TaqI TCGA 1 cut(s) 195
TasI AATT 1 cut(s) 122
TfiI GAWTC 1 cut(s) 210
TspDTI ATGAA 1 cut(s) 202
XspI CTAG 1 cut(s) 201
Zsp2I ATGCAT 1 cut(s) 65
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.