Rh2BG253800

HUA2-like protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Reverse (-)
26245571 .. 26246349
779 bp
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UTR
Exon/CDS
Intron
Rh2BG253800.1

Sequence Viewer

Length: 150 bp
ATGTCATCAGTCTTCACCTTCAAGCTCCATCGCATGGTAAGTGAGCCGGAGAAGTGGGGTTACTCTGCTGATTGGAAGAAAGTACTCGTTTTCTTCTTTGGAACACAACAGATGAAAGAGATTGCACTACTAAGGTCAACTGGCAACTAG
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

49

Amino Acids

5.76

Weight (kDa)

9.7

Isoelectric Point (pI)

38.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0025528)

Species Orthologous Gene IDs
rosa_multiflora Rmu_sc0002226.1_g000001
rosa_roxburghii Rroxscaffold_7G00176000
rosa_samantha Rh2BG253800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 34
AfaI GTAC 1 cut(s) 84
AfiI CCNNNNNNNGG 1 cut(s) 34
AgsI TTSAA 1 cut(s) 22
AluBI AGCT 1 cut(s) 25
AluI AGCT 1 cut(s) 25
AsuHPI GGTGA 1 cut(s) 7
BarI GAAGNNNNNNTAC 2 cut(s) 44, 76
BbsI GAAGAC 1 cut(s) 4
BccI CCATC 1 cut(s) 36
BfaI CTAG 1 cut(s) 148
BmcAI AGTACT 1 cut(s) 84
BpiI GAAGAC 1 cut(s) 4
Bsc4I CCNNNNNNNGG 1 cut(s) 34
Bse1I ACTGG 1 cut(s) 145
BseLI CCNNNNNNNGG 1 cut(s) 34
BseNI ACTGG 1 cut(s) 145
BsiSI CCGG 1 cut(s) 47
BslI CCNNNNNNNGG 1 cut(s) 34
BsrI ACTGG 1 cut(s) 145
BstDEI CTNAG 1 cut(s) 131
BstV2I GAAGAC 1 cut(s) 4
BtgZI GCGATG 1 cut(s) 14
Csp6I GTAC 1 cut(s) 83
CviAII CATG 1 cut(s) 34
CviJI RGCY 2 cut(s) 25, 46
CviKI_1 RGCY 2 cut(s) 25, 46
CviQI GTAC 1 cut(s) 83
DdeI CTNAG 1 cut(s) 131
FaeI CATG 1 cut(s) 37
FaiI YATR 1 cut(s) 35
FatI CATG 1 cut(s) 33
FspBI CTAG 1 cut(s) 148
HapII CCGG 1 cut(s) 47
Hin1II CATG 1 cut(s) 37
HincII GTYRAC 1 cut(s) 138
HindII GTYRAC 1 cut(s) 138
HpaII CCGG 1 cut(s) 47
HphI GGTGA 1 cut(s) 7
Hpy166II GTNNAC 1 cut(s) 138
Hpy8I GTNNAC 1 cut(s) 138
HpyAV CCTTC 1 cut(s) 28
HpyCH4V TGCA 1 cut(s) 125
HpyF3I CTNAG 1 cut(s) 131
Hsp92II CATG 1 cut(s) 37
LmnI GCTCC 1 cut(s) 30
LpnPI CCDG 2 cut(s) 60, 126
MaeI CTAG 1 cut(s) 148
MaeIII GTNAC 1 cut(s) 59
MboII GAAGA 3 cut(s) 4, 85, 88
MspI CCGG 1 cut(s) 47
NlaIII CATG 1 cut(s) 37
PflMI CCANNNNNTGG 1 cut(s) 34
RsaI GTAC 1 cut(s) 84
RsaNI GTAC 1 cut(s) 83
ScaI AGTACT 1 cut(s) 84
SetI ASST 3 cut(s) 20, 27, 137
SgeI CNNG 4 cut(s) 34, 46, 59, 98
SspMI CTAG 1 cut(s) 148
TatI WGTACW 1 cut(s) 82
TspDTI ATGAA 1 cut(s) 128
Van91I CCANNNNNTGG 1 cut(s) 34
XspI CTAG 1 cut(s) 148
ZrmI AGTACT 1 cut(s) 84
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.