No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_sc0002658.1_g000006 |
| rosa_samantha | Rh2BG371400 Rh3BG277000 Rh6AG169900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 68 |
| AccBSI | CCGCTC | 1 cut(s) | 11 |
| AciI | CCGC | 1 cut(s) | 9 |
| AfaI | GTAC | 1 cut(s) | 58 |
| AgsI | TTSAA | 4 cut(s) | 199, 286, 313, 335 |
| AjnI | CCWGG | 2 cut(s) | 67, 88 |
| AluBI | AGCT | 6 cut(s) | 105, 133, 158, 184, 292, 319 |
| AluI | AGCT | 6 cut(s) | 105, 133, 158, 184, 292, 319 |
| Alw21I | GWGCWC | 1 cut(s) | 328 |
| Alw26I | GTCTC | 2 cut(s) | 21, 72 |
| Alw44I | GTGCAC | 1 cut(s) | 324 |
| Ama87I | CYCGRG | 1 cut(s) | 106 |
| ApaLI | GTGCAC | 1 cut(s) | 324 |
| AspS9I | GGNCC | 1 cut(s) | 92 |
| AsuHPI | GGTGA | 2 cut(s) | 14, 65 |
| AvaI | CYCGRG | 1 cut(s) | 106 |
| AvaII | GGWCC | 1 cut(s) | 92 |
| BaeGI | GKGCMC | 1 cut(s) | 328 |
| Bbv12I | GWGCWC | 1 cut(s) | 328 |
| BccI | CCATC | 1 cut(s) | 289 |
| BceAI | ACGGC | 4 cut(s) | 83, 123, 148, 174 |
| BciT130I | CCWGG | 2 cut(s) | 69, 90 |
| BcoDI | GTCTC | 2 cut(s) | 21, 72 |
| BfaI | CTAG | 1 cut(s) | 300 |
| BfuAI | ACCTGC | 1 cut(s) | 68 |
| Bme1390I | CCNGG | 2 cut(s) | 69, 90 |
| Bme18I | GGWCC | 1 cut(s) | 92 |
| BmeT110I | CYCGRG | 1 cut(s) | 106 |
| BmgT120I | GGNCC | 1 cut(s) | 92 |
| BmrFI | CCNGG | 2 cut(s) | 69, 90 |
| BmsI | GCATC | 1 cut(s) | 28 |
| BsaJI | CCNNGG | 2 cut(s) | 139, 164 |
| BseBI | CCWGG | 2 cut(s) | 69, 90 |
| BseDI | CCNNGG | 2 cut(s) | 139, 164 |
| BseSI | GKGCMC | 1 cut(s) | 328 |
| BsiHKAI | GWGCWC | 1 cut(s) | 328 |
| BsiHKCI | CYCGRG | 1 cut(s) | 106 |
| BsmAI | GTCTC | 2 cut(s) | 21, 72 |
| BsoBI | CYCGRG | 1 cut(s) | 106 |
| Bsp1286I | GDGCHC | 1 cut(s) | 328 |
| Bsp143I | GATC | 1 cut(s) | 237 |
| BspACI | CCGC | 1 cut(s) | 9 |
| BspHI | TCATGA | 1 cut(s) | 240 |
| BspMI | ACCTGC | 1 cut(s) | 68 |
| BsrBI | CCGCTC | 1 cut(s) | 11 |
| BssECI | CCNNGG | 2 cut(s) | 139, 164 |
| BssMI | GATC | 1 cut(s) | 237 |
| Bst2UI | CCWGG | 2 cut(s) | 69, 90 |
| BstC8I | GCNNGC | 1 cut(s) | 156 |
| BstDSI | CCRYGG | 2 cut(s) | 139, 164 |
| BstEII | GGTNACC | 1 cut(s) | 71 |
| BstKTI | GATC | 1 cut(s) | 240 |
| BstMAI | GTCTC | 2 cut(s) | 21, 72 |
| BstMBI | GATC | 1 cut(s) | 237 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 160 |
| BstNI | CCWGG | 2 cut(s) | 69, 90 |
| BstPI | GGTNACC | 1 cut(s) | 71 |
| BstSCI | CCNGG | 2 cut(s) | 67, 88 |
| BstSLI | GKGCMC | 1 cut(s) | 328 |
| BtgI | CCRYGG | 2 cut(s) | 139, 164 |
| BveI | ACCTGC | 1 cut(s) | 68 |
| Cac8I | GCNNGC | 1 cut(s) | 156 |
| CciI | TCATGA | 1 cut(s) | 240 |
| Cfr13I | GGNCC | 1 cut(s) | 92 |
| Csp6I | GTAC | 1 cut(s) | 57 |
| CviAII | CATG | 1 cut(s) | 241 |
| CviJI | RGCY | 8 cut(s) | 98, 105, 133, 158, 184, 292, 299, 319 |
| CviKI_1 | RGCY | 8 cut(s) | 98, 105, 133, 158, 184, 292, 299, 319 |
| CviQI | GTAC | 1 cut(s) | 57 |
| DpnI | GATC | 1 cut(s) | 239 |
| DpnII | GATC | 1 cut(s) | 237 |
| Eco47I | GGWCC | 1 cut(s) | 92 |
| Eco88I | CYCGRG | 1 cut(s) | 106 |
| Eco91I | GGTNACC | 1 cut(s) | 71 |
| EcoO65I | GGTNACC | 1 cut(s) | 71 |
| EcoRII | CCWGG | 2 cut(s) | 67, 88 |
| FaeI | CATG | 1 cut(s) | 244 |
| FaiI | YATR | 4 cut(s) | 15, 206, 220, 242 |
| FatI | CATG | 1 cut(s) | 240 |
| FspBI | CTAG | 1 cut(s) | 300 |
| Hin1II | CATG | 1 cut(s) | 244 |
| HinfI | GANTC | 1 cut(s) | 149 |
| HphI | GGTGA | 2 cut(s) | 14, 65 |
| Hpy166II | GTNNAC | 1 cut(s) | 326 |
| Hpy188III | TCNNGA | 3 cut(s) | 241, 286, 313 |
| Hpy8I | GTNNAC | 1 cut(s) | 326 |
| Hpy99I | CGWCG | 2 cut(s) | 129, 180 |
| HpyAV | CCTTC | 3 cut(s) | 74, 95, 250 |
| HpyCH4V | TGCA | 2 cut(s) | 214, 326 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 160 |
| Hsp92II | CATG | 1 cut(s) | 244 |
| Kzo9I | GATC | 1 cut(s) | 237 |
| LpnPI | CCDG | 7 cut(s) | 54, 73, 75, 81, 102, 108, 168 |
| LweI | GCATC | 1 cut(s) | 28 |
| MaeI | CTAG | 1 cut(s) | 300 |
| MaeIII | GTNAC | 1 cut(s) | 71 |
| MalI | GATC | 1 cut(s) | 239 |
| MbiI | CCGCTC | 1 cut(s) | 11 |
| MboI | GATC | 1 cut(s) | 237 |
| MboII | GAAGA | 1 cut(s) | 113 |
| MhlI | GDGCHC | 1 cut(s) | 328 |
| MluCI | AATT | 2 cut(s) | 45, 281 |
| MlyI | GAGTC | 1 cut(s) | 158 |
| MnlI | CCTC | 1 cut(s) | 237 |
| MspR9I | CCNGG | 2 cut(s) | 69, 90 |
| MvaI | CCWGG | 2 cut(s) | 69, 90 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 160 |
| NdeII | GATC | 1 cut(s) | 237 |
| NlaIII | CATG | 1 cut(s) | 244 |
| NmuCI | GTSAC | 1 cut(s) | 71 |
| PagI | TCATGA | 1 cut(s) | 240 |
| PleI | GAGTC | 1 cut(s) | 157 |
| PpsI | GAGTC | 1 cut(s) | 157 |
| Psp6I | CCWGG | 2 cut(s) | 67, 88 |
| PspEI | GGTNACC | 1 cut(s) | 71 |
| PspGI | CCWGG | 2 cut(s) | 67, 88 |
| PspPI | GGNCC | 1 cut(s) | 92 |
| RsaI | GTAC | 1 cut(s) | 58 |
| RsaNI | GTAC | 1 cut(s) | 57 |
| Sau3AI | GATC | 1 cut(s) | 237 |
| Sau96I | GGNCC | 1 cut(s) | 92 |
| SchI | GAGTC | 1 cut(s) | 158 |
| ScrFI | CCNGG | 2 cut(s) | 69, 90 |
| SduI | GDGCHC | 1 cut(s) | 328 |
| SetI | ASST | 7 cut(s) | 62, 107, 135, 160, 186, 294, 321 |
| SfaNI | GCATC | 1 cut(s) | 28 |
| SinI | GGWCC | 1 cut(s) | 92 |
| Sse9I | AATT | 2 cut(s) | 45, 281 |
| SsiI | CCGC | 1 cut(s) | 9 |
| SspMI | CTAG | 1 cut(s) | 300 |
| StyD4I | CCNGG | 2 cut(s) | 67, 88 |
| TaqI | TCGA | 1 cut(s) | 147 |
| TasI | AATT | 2 cut(s) | 45, 281 |
| TseFI | GTSAC | 1 cut(s) | 71 |
| Tsp45I | GTSAC | 1 cut(s) | 71 |
| TspGWI | ACGGA | 1 cut(s) | 164 |
| VneI | GTGCAC | 1 cut(s) | 324 |
| VpaK11BI | GGWCC | 1 cut(s) | 92 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 162 |
| XspI | CTAG | 1 cut(s) | 300 |