Rh2BG624600

Glucose / Sorbosone dehydrogenase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Forward (+)
84638375 .. 84668321
29947 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG624600.1

Sequence Viewer

Length: 3051 bp
ATGGACTTGGCTGCAGAGATAGGAAGAAGTGTCAGGACCTCGTTTCGTGAGCATGCATCGAGTTTCAGGAGCACTGCAGATGTAAGGTCCATAAAGAAGAATGAAGACGATGAACTAGAGCTGCAGTGGGCCGCCATTGAGAGGTTGCCAACGTTTGAGCGCATTAGGACTTCATTGTTTGATTGCAGCAAAGATGAGAAGGAAGATGAGGCTAGTAACAAGAGTAAGATGGCACAGATTGATGTGTCGAAGCTAGGATCAATGGAGAGGCATGTGGTCATTCAGAAGTTGATCAAGGAAATTGAGGGAGATAACCACCGGCTCTTGCAGAAACTCAGAGAAAGAATAGACAGAGTAGGACTGCAACTGCCAACTGTGGAAGTTCGATACCAGAATTTGTTAGTAGAAGCAGAATATGAAGTAGTTCAAGGAAAACCTCTCCCTACACTATGGAACACCGTTAAAAGCTTATTCTCTGTTATGACTCAGATAGTTGGGTGCAAGCCTCAAGCATACAAGCTAGAAATTCTCAGAGATATCAGTGGCATCATCAAACCATCAAGGATGACTCTATTGCTTGGCCCTCCAGGCTGTGGGAAATCCACTTTATTACAGGCGCTTGCAGGGAAACTTAACCATTCTCTCAAGTTAAGCATCCCAACATTTCTTGCTCTATCCAGGGAGAACGATGACCTAGTTAGAGAACTCAGCTGTCCAGCAGAAGGGGCAAAGAAACTACATTTTTCTACTCGCTTTGCACAAAATGAATGGGAGCAATTTAAAGCCTGCCTCTGGAAGCAACATCTCTCCTACTGGAGAAATCCACAATATAACCTGGGCAGATTGACAATTACTGCTGCATCCTCTTTGTTATTCGGAGCACTTCTTTGGCAGAAAGGGCAGACAGTAGATAATGAACAGGATTTTTTCAACATTCTGGGATCAATGTTTGTTTTACTGCAATTCATGGGAATAGGAAACTGCTCCTCTGTTTTACCCTGTATTGCTTCAGAGCGGAATGTTGTATACCGAGAAAGCCTTTTGATCATTTATCACGGGTCACCCTTCAAGCCAAAGACCCCACTTTCATTCTGTCAATACAATGGAAGTGTTTGCTGTAATTCCACTGATGATATGCAACTGCAAAATCTATTTACGGCTATGAATGTTTCTGATCTCAGTTGTGCTTCTCTTCTGAAATCTATACTTTGCTCGAAATGTGATCAGTTTTCCGCAGATCTATACAGAATGGAATCAGTGCCTCGTGAAGTTCCTGTTCTCTGCAACTCAACTGTTTCATCAAACTCAACCCAATACCAACACAGTGGAGCTGACTTTTGTACCAAGGTTTGGGATGAATGCCAAAATGTATCTGTGTTGAGTTCTCCATTTGCGTTGCAAGGTAGAGGTGGAACACCATTTAATTCTACTTCCAAGCTGAGTGATATATGGCAGTCAAAAAGTGCTTTCTGTGATACATTTGGTGGATCTTCTGATGGGGAATTGGTCTGTTTTGATGGTGGACCTGTGTTGCTGAACAACACTGAAATTCCAAGTCCCCCAAATGGCATGTGCCTTGAAAAAATTGGAAATGGATCTTATCTTAACATGGTACCTCATCCAGATGGGTCTAATCGCGTGTTCTTATCTGATCAACCGGGGAAAGTATGGCTGGCAACTGTCCCTGAGGAGGGATCAGGAGAAACGTTGGTGATTGATGATTCAAATCCGTTTCTTGATCTAACTGATCAAGTGTATGCTGACACTGAGTTTGGAATGATGGGATTAGCATTCCATCCTAATTATCTACAGAATGGCCGTTTCTTTGCTTCATTTAACTGTGATAAGGTTAGATGGCCAGGATGTTCAGGAAGATGTTCGTGTAACTCAGATGTGGGATGTGATCCTTCCAAGCTTGGTTCTGATAATGGTGCTCAGCCATGTCAATATCACAGTATCATAGCAGAGTTCACTGCTAATGGTACCGCATCACAACCTTCTTCGGTCATCACTAGTGTTAAACCATTGGAAGTCAGAAGAATTTTCACTATGGGACTTCCATTTACTTCCCATCATGGAGGCCAAATTCTTTTTGGACCCAAAGACGGGTATTTGTACTTCATGATGGGAGATGGTGGTAGCGTGGGTGACCCTTACAATTTTTCACAAAACAAGAAATCCTTGCTTGGAAAGATTATGAGGCTAGACATAGATTACTTACCAAGTGCATTCTCAATTAGTGATCTTGGCCTATGGGGAAACTATTCTGTTCCTGGAGATAATCCGTTTTCTGAAGATAAGGAGTTGCAGCCTGAAATTTGGGCTCTAGGATTTAGAAATCCTTGGCGATGTAGTTTTGATCTTGAAAGACCTTCCTACTTCCTTTGTGCTGATGTTGGTCAGGACAAATATGAGGAGGTTGATATAGTCACCAAGGGTGGAAACTACGGATGGCGTGCATATGACGGTGCTTTTCCATACCATCCCCCAAAGTCTCCAGGAGGAAATACATCTATGAGTTCTATCAACCCGATTTTCCCTGTAATGGGATACAACCACTCTGATGTCAACAAGGCTGAAGGTTCTGCATCAATCACTGGTGGCTACTTTTACCGCTCCATGACAGATCCATGCATGTATGGAAGGTATCTTTATGCGGATTTGTATGCTGGTCACATATGGGCAGGTACAGAAACTCCTGAAGATAGCGGAAACTTCACAAGTACTATAGTTCCTGTCAGTTGTGCTCTGGACTCTCCTATCGAGTGCAGAGCAGAGGCAGGAAGCTCTTTTCCTGCATTGGGGTTCATATTCTCCTTTGGTCAGGATAACAGGAAAGACATGTTTATCTTAGCCAGTACCGGTGTATATAGAGTTGCTAGGCCTAGTCGGTGCAGCTACACTTACTCCAAAGAAAATGCTTCATCTCTTTCCCATCCAGGTTCTGTTCCTTCTCCTTCTCCCTCCACTTCGATAACTAGGAAGTTGAACAACCCAGTAGTGGAGCGGTTGCTCTTTTACTGTTTAATGTCACTTTTGTTTGGTTTTTAA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1016

Amino Acids

112.53

Weight (kDa)

5.65

Isoelectric Point (pI)

40.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_tran PF00005 177 - 212 1e-05 ABC transporter
ABC2_membrane PF01061 258 - 352 9.4e-16 ABC-2 type transporter
GSDH PF07995 546 - 845 2.8e-20 Glucose / Sorbosone dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0017056)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G39970 AT5G39970 AT5G39970
fragaria_vesca FvH4_6g49480
malus_domestica MD17G1046100.v1.1
prunus_persica Prupe.3G273500_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0169421
rosa_laevigata RLG00000021860
rosa_multiflora Rmu_sc0000648.1_g000012
rosa_roxburghii Rroxscaffold_2G00082180
rosa_rugosa Rorug02G0539700
rosa_samantha Rh2BG624600
rosa_wichuraiana Rw2G050700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 2675
Acc65I GGTACC 2 cut(s) 1612, 1982
AccB1I GGYRCC 2 cut(s) 1612, 1982
AccB7I CCANNNNNTGG 2 cut(s) 593, 1350
AccBSI CCGCTC 3 cut(s) 1015, 2616, 3007
AccI GTMKAC 1 cut(s) 1026
AccII CGCG 1 cut(s) 1638
AciI CCGC 8 cut(s) 132, 1015, 1233, 1986, 2614, 2657, 2709, 3007
AclI AACGTT 2 cut(s) 152, 1706
AclWI GGATC 7 cut(s) 265, 949, 1495, 1603, 1702, 1898, 2621
AcoI YGGCCR 2 cut(s) 1816, 1856
AcsI RAATTY 6 cut(s) 394, 525, 1548, 2040, 2085, 2316
AcuI CTGAAG 4 cut(s) 993, 2313, 2598, 2721
AfaI GTAC 7 cut(s) 1342, 1614, 1984, 2117, 2689, 2725, 2860
AflIII ACRYGT 1 cut(s) 2841
AgeI ACCGGT 1 cut(s) 2861
AgsI TTSAA 7 cut(s) 428, 931, 1069, 1580, 1725, 2366, 2989
AhlI ACTAGT 1 cut(s) 2012
AjnI CCWGG 7 cut(s) 586, 677, 834, 1858, 2272, 2497, 2938
Alw21I GWGCWC 4 cut(s) 74, 883, 1936, 2749
Alw26I GTCTC 1 cut(s) 2499
AlwI GGATC 7 cut(s) 265, 949, 1495, 1603, 1702, 1898, 2621
AlwNI CAGNNNCTG 1 cut(s) 2945
AoxI GGCC 7 cut(s) 129, 580, 1816, 1856, 2080, 2248, 2882
ApeKI GCWGC 6 cut(s) 11, 121, 186, 857, 2308, 2895
ApoI RAATTY 6 cut(s) 394, 525, 1548, 2040, 2085, 2316
ArsI GACNNNNNNTTYG 2 cut(s) 1754, 1786
AsiGI ACCGGT 1 cut(s) 2861
Asp700I GAANNNNTTC 3 cut(s) 423, 1876, 2263
Asp718I GGTACC 2 cut(s) 1612, 1982
AspLEI GCGC 2 cut(s) 162, 619
AspS9I GGNCC 6 cut(s) 36, 87, 129, 581, 1523, 2096
AsuC2I CCSGG 1 cut(s) 1659
AsuHPI GGTGA 4 cut(s) 1053, 1723, 2159, 2422
AvaII GGWCC 4 cut(s) 36, 87, 1523, 2096
AxyI CCTNAGG 1 cut(s) 1686
BaeI ACNNNNGTAYC 2 cut(s) 1324, 1357
BalI TGGCCA 1 cut(s) 1858
BanI GGYRCC 2 cut(s) 1612, 1982
BanII GRGCYC 1 cut(s) 2326
BarI GAAGNNNNNNTAC 2 cut(s) 2102, 2134
BauI CACGAG 1 cut(s) 1263
BbsI GAAGAC 1 cut(s) 111
Bbv12I GWGCWC 4 cut(s) 74, 883, 1936, 2749
BbvI GCAGC 5 cut(s) 108, 198, 844, 2320, 2907
BceAI ACGGC 2 cut(s) 1173, 1803
BciT130I CCWGG 7 cut(s) 588, 679, 836, 1860, 2274, 2499, 2940
BciVI GTATCC 1 cut(s) 2543
BclI TGATCA 5 cut(s) 291, 1044, 1222, 1651, 1747
BcnI CCSGG 1 cut(s) 1659
BcoDI GTCTC 1 cut(s) 2499
BcuI ACTAGT 1 cut(s) 2012
BfmI CTRYAG 5 cut(s) 12, 75, 122, 1808, 2727
BfoI RGCGCY 1 cut(s) 620
BfuAI ACCTGC 1 cut(s) 2675
BfuI GTATCC 1 cut(s) 2543
BglI GCCNNNNNGGC 1 cut(s) 588
BglII AGATCT 1 cut(s) 1237
BisI GCNGC 7 cut(s) 12, 122, 132, 187, 858, 2309, 2896
BlpI GCTNAGC 1 cut(s) 1935
BlsI GCNGC 7 cut(s) 13, 123, 133, 188, 859, 2310, 2897
BmcAI AGTACT 1 cut(s) 2725
Bme1390I CCNGG 8 cut(s) 588, 679, 836, 1659, 1860, 2274, 2499, 2940
Bme18I GGWCC 4 cut(s) 36, 87, 1523, 2096
BmgT120I GGNCC 6 cut(s) 36, 87, 129, 581, 1523, 2096
BmiI GGNNCC 3 cut(s) 1614, 1984, 2098
BmrFI CCNGG 8 cut(s) 588, 679, 836, 1659, 1860, 2274, 2499, 2940
BmrI ACTGGG 1 cut(s) 2990
BmsI GCATC 6 cut(s) 65, 555, 663, 869, 1997, 2597
BmuI ACTGGG 1 cut(s) 2990
BpiI GAAGAC 1 cut(s) 111
BpmI CTGGAG 4 cut(s) 570, 835, 2295, 2481
Bpu1102I GCTNAGC 1 cut(s) 1935
BpuEI CTTGAG 2 cut(s) 492, 629
BpuMI CCSGG 1 cut(s) 1659
BsaBI GATNNNNATC 1 cut(s) 1725
BsaJI CCNNGG 6 cut(s) 678, 835, 1344, 1658, 2342, 2433
BsaWI WCCGGW 1 cut(s) 2861
BsaXI ACNNNNNCTCC 4 cut(s) 2680, 2710, 2891, 2921
Bse118I RCCGGY 2 cut(s) 318, 2861
Bse1I ACTGG 4 cut(s) 818, 2602, 2856, 2996
Bse21I CCTNAGG 1 cut(s) 1686
Bse8I GATNNNNATC 1 cut(s) 1725
BseBI CCWGG 7 cut(s) 588, 679, 836, 1860, 2274, 2499, 2940
BseDI CCNNGG 6 cut(s) 678, 835, 1344, 1658, 2342, 2433
BseJI GATNNNNATC 1 cut(s) 1725
BseNI ACTGG 4 cut(s) 818, 2602, 2856, 2996
BseRI GAGGAG 3 cut(s) 976, 1703, 2429
BseXI GCAGC 5 cut(s) 108, 198, 844, 2320, 2907
BsgI GTGCAG 2 cut(s) 2788, 2914
Bsh1236I CGCG 1 cut(s) 1638
BshFI GGCC 7 cut(s) 131, 582, 1818, 1858, 2082, 2250, 2884
BshNI GGYRCC 2 cut(s) 1612, 1982
BshTI ACCGGT 1 cut(s) 2861
BsiHKAI GWGCWC 4 cut(s) 74, 883, 1936, 2749
BsiSI CCGG 3 cut(s) 319, 1658, 2862
BslFI GGGAC 3 cut(s) 1542, 1667, 2067
BsmAI GTCTC 1 cut(s) 2499
BsmFI GGGAC 3 cut(s) 1542, 1667, 2067
BsmI GAATGC 3 cut(s) 1364, 1790, 2228
BsnI GGCC 7 cut(s) 131, 582, 1818, 1858, 2082, 2250, 2884
Bsp1286I GDGCHC 5 cut(s) 74, 883, 1936, 2326, 2749
Bsp1720I GCTNAGC 1 cut(s) 1935
BspACI CCGC 8 cut(s) 132, 1015, 1233, 1986, 2614, 2657, 2709, 3007
BspANI GGCC 7 cut(s) 131, 582, 1818, 1858, 2082, 2250, 2884
BspFNI CGCG 1 cut(s) 1638
BspHI TCATGA 1 cut(s) 2121
BspLI GGNNCC 3 cut(s) 1614, 1984, 2098
BspMAI CTGCAG 3 cut(s) 16, 79, 126
BspMI ACCTGC 1 cut(s) 2675
BspPI GGATC 7 cut(s) 265, 949, 1495, 1603, 1702, 1898, 2621
BspT107I GGYRCC 2 cut(s) 1612, 1982
BsrBI CCGCTC 3 cut(s) 1015, 2616, 3007
BsrFI RCCGGY 2 cut(s) 318, 2861
BsrI ACTGG 4 cut(s) 818, 2602, 2856, 2996
BssAI RCCGGY 2 cut(s) 318, 2861
BssECI CCNNGG 6 cut(s) 678, 835, 1344, 1658, 2342, 2433
BssNAI GTATAC 1 cut(s) 1027
BssSI CACGAG 1 cut(s) 1263
BssT1I CCWWGG 3 cut(s) 1344, 2342, 2433
Bst1107I GTATAC 1 cut(s) 1027
Bst2BI CACGAG 1 cut(s) 1263
Bst2UI CCWGG 7 cut(s) 588, 679, 836, 1860, 2274, 2499, 2940
Bst6I CTCTTC 1 cut(s) 1197
BstC8I GCNNGC 6 cut(s) 54, 503, 621, 787, 1674, 2457
BstEII GGTNACC 2 cut(s) 1059, 2147
BstFNI CGCG 1 cut(s) 1638
BstH2I RGCGCY 1 cut(s) 620
BstHHI GCGC 2 cut(s) 162, 619
BstMAI GTCTC 1 cut(s) 2499
BstMWI GCNNNNNNNGC 3 cut(s) 588, 725, 898
BstNI CCWGG 7 cut(s) 588, 679, 836, 1860, 2274, 2499, 2940
BstNSI RCATGY 5 cut(s) 56, 275, 1573, 2638, 2845
BstPI GGTNACC 2 cut(s) 1059, 2147
BstSCI CCNGG 8 cut(s) 586, 677, 834, 1657, 1858, 2272, 2497, 2938
BstSFI CTRYAG 5 cut(s) 12, 75, 122, 1808, 2727
BstUI CGCG 1 cut(s) 1638
BstV1I GCAGC 5 cut(s) 108, 198, 844, 2320, 2907
BstV2I GAAGAC 1 cut(s) 111
BstX2I RGATCY 4 cut(s) 1237, 1487, 1595, 2626
BstXI CCANNNNNNTGG 1 cut(s) 1325
BstYI RGATCY 4 cut(s) 1237, 1487, 1595, 2626
BstZ17I GTATAC 1 cut(s) 1027
Bsu36I CCTNAGG 1 cut(s) 1686
BsuI GTATCC 1 cut(s) 2543
BsuRI GGCC 7 cut(s) 131, 582, 1818, 1858, 2082, 2250, 2884
BtgZI GCGATG 1 cut(s) 2362
BtsI GCAGTG 3 cut(s) 72, 131, 1971
BveI ACCTGC 1 cut(s) 2675
Cac8I GCNNGC 6 cut(s) 54, 503, 621, 787, 1674, 2457
CaiI CAGNNNCTG 1 cut(s) 2945
CciI TCATGA 1 cut(s) 2121
CfoI GCGC 2 cut(s) 162, 619
Cfr10I RCCGGY 2 cut(s) 318, 2861
Cfr13I GGNCC 6 cut(s) 36, 87, 129, 581, 1523, 2096
Csp6I GTAC 7 cut(s) 1341, 1613, 1983, 2116, 2688, 2724, 2859
CspAI ACCGGT 1 cut(s) 2861
CviQI GTAC 7 cut(s) 1341, 1613, 1983, 2116, 2688, 2724, 2859
DraI TTTAAA 1 cut(s) 781
EaeI YGGCCR 2 cut(s) 1816, 1856
Eam1104I CTCTTC 1 cut(s) 1197
EarI CTCTTC 1 cut(s) 1197
Eco130I CCWWGG 3 cut(s) 1344, 2342, 2433
Eco147I AGGCCT 1 cut(s) 2884
Eco24I GRGCYC 1 cut(s) 2326
Eco32I GATATC 1 cut(s) 538
Eco47I GGWCC 4 cut(s) 36, 87, 1523, 2096
Eco57I CTGAAG 4 cut(s) 993, 2313, 2598, 2721
Eco81I CCTNAGG 1 cut(s) 1686
Eco91I GGTNACC 2 cut(s) 1059, 2147
EcoO109I RGGNCCY 1 cut(s) 36
EcoO65I GGTNACC 2 cut(s) 1059, 2147
EcoRII CCWGG 7 cut(s) 586, 677, 834, 1858, 2272, 2497, 2938
EcoRV GATATC 1 cut(s) 538
EcoT14I CCWWGG 3 cut(s) 1344, 2342, 2433
EcoT22I ATGCAT 2 cut(s) 58, 2636
EcoT38I GRGCYC 1 cut(s) 2326
ErhI CCWWGG 3 cut(s) 1344, 2342, 2433
FalI AAGNNNNNCTT 2 cut(s) 2165, 2197
FaqI GGGAC 3 cut(s) 1542, 1667, 2067
FauNDI CATATG 2 cut(s) 2461, 2678
FbaI TGATCA 5 cut(s) 291, 1044, 1222, 1651, 1747
FblI GTMKAC 1 cut(s) 1026
Fnu4HI GCNGC 7 cut(s) 12, 122, 132, 187, 858, 2309, 2896
FriOI GRGCYC 1 cut(s) 2326
Fsp4HI GCNGC 7 cut(s) 12, 122, 132, 187, 858, 2309, 2896
GlaI GCGC 2 cut(s) 161, 618
GluI GCNGC 7 cut(s) 12, 122, 132, 187, 858, 2309, 2896
GsuI CTGGAG 4 cut(s) 570, 835, 2295, 2481
HaeII RGCGCY 1 cut(s) 620
HaeIII GGCC 7 cut(s) 131, 582, 1818, 1858, 2082, 2250, 2884
HapII CCGG 3 cut(s) 319, 1658, 2862
HhaI GCGC 2 cut(s) 162, 619
Hin6I GCGC 2 cut(s) 160, 617
HinP1I GCGC 2 cut(s) 160, 617
HincII GTYRAC 1 cut(s) 2569
HindII GTYRAC 1 cut(s) 2569
HindIII AAGCTT 2 cut(s) 466, 1913
HinfI GANTC 5 cut(s) 484, 568, 1253, 1721, 2753
HpaII CCGG 3 cut(s) 319, 1658, 2862
HphI GGTGA 4 cut(s) 1053, 1723, 2159, 2422
Hpy166II GTNNAC 4 cut(s) 1027, 1523, 1971, 2569
Hpy8I GTNNAC 4 cut(s) 1027, 1523, 1971, 2569
HpyCH4IV ACGT 2 cut(s) 152, 1706
HpyF10VI GCNNNNNNNGC 3 cut(s) 588, 725, 898
HpySE526I ACGT 2 cut(s) 152, 1706
HspAI GCGC 2 cut(s) 160, 617
KpnI GGTACC 2 cut(s) 1616, 1986
Ksp22I TGATCA 5 cut(s) 291, 1044, 1222, 1651, 1747
LmnI GCTCC 7 cut(s) 69, 772, 878, 989, 1328, 2621, 3004
Lsp1109I GCAGC 5 cut(s) 108, 198, 844, 2320, 2907
LweI GCATC 6 cut(s) 65, 555, 663, 869, 1997, 2597
MaeII ACGT 2 cut(s) 152, 1706
MaeIII GTNAC 7 cut(s) 215, 1059, 1883, 2147, 2428, 2672, 3030
MbiI CCGCTC 3 cut(s) 1015, 2616, 3007
MflI RGATCY 4 cut(s) 1237, 1487, 1595, 2626
MhlI GDGCHC 5 cut(s) 74, 883, 1936, 2326, 2749
MlsI TGGCCA 1 cut(s) 1858
MluNI TGGCCA 1 cut(s) 1858
MlyI GAGTC 3 cut(s) 478, 562, 2747
Mox20I TGGCCA 1 cut(s) 1858
Mph1103I ATGCAT 2 cut(s) 58, 2636
MroXI GAANNNNTTC 3 cut(s) 423, 1876, 2263
MscI TGGCCA 1 cut(s) 1858
MslI CAYNNNNRTG 2 cut(s) 1623, 2562
Msp20I TGGCCA 1 cut(s) 1858
MspA1I CMGCKG 1 cut(s) 711
MspI CCGG 3 cut(s) 319, 1658, 2862
MspR9I CCNGG 8 cut(s) 588, 679, 836, 1659, 1860, 2274, 2499, 2940
Mva1269I GAATGC 3 cut(s) 1364, 1790, 2228
MvaI CCWGG 7 cut(s) 588, 679, 836, 1860, 2274, 2499, 2940
MvnI CGCG 1 cut(s) 1638
MwoI GCNNNNNNNGC 3 cut(s) 588, 725, 898
NciI CCSGG 1 cut(s) 1659
NdeI CATATG 2 cut(s) 2461, 2678
NlaIV GGNNCC 3 cut(s) 1614, 1984, 2098
NmuCI GTSAC 5 cut(s) 1059, 2147, 2428, 2672, 3030
NsiI ATGCAT 2 cut(s) 58, 2636
NspI RCATGY 5 cut(s) 56, 275, 1573, 2638, 2845
PaeI GCATGC 1 cut(s) 56
PagI TCATGA 1 cut(s) 2121
PceI AGGCCT 1 cut(s) 2884
PciI ACATGT 1 cut(s) 2841
PctI GAATGC 3 cut(s) 1364, 1790, 2228
PdmI GAANNNNTTC 3 cut(s) 423, 1876, 2263
PfeI GAWTC 2 cut(s) 1253, 1721
PflMI CCANNNNNTGG 2 cut(s) 593, 1350
PfoI TCCNGGA 2 cut(s) 2272, 2497
PinAI ACCGGT 1 cut(s) 2861
PkrI GCNGC 7 cut(s) 13, 123, 133, 188, 859, 2310, 2897
PleI GAGTC 3 cut(s) 478, 562, 2747
PpsI GAGTC 3 cut(s) 478, 562, 2747
PpuMI RGGWCCY 1 cut(s) 36
PscI ACATGT 1 cut(s) 2841
Psp1406I AACGTT 2 cut(s) 152, 1706
Psp5II RGGWCCY 1 cut(s) 36
Psp6I CCWGG 7 cut(s) 586, 677, 834, 1858, 2272, 2497, 2938
PspEI GGTNACC 2 cut(s) 1059, 2147
PspGI CCWGG 7 cut(s) 586, 677, 834, 1858, 2272, 2497, 2938
PspN4I GGNNCC 3 cut(s) 1614, 1984, 2098
PspPI GGNCC 6 cut(s) 36, 87, 129, 581, 1523, 2096
PspPPI RGGWCCY 1 cut(s) 36
PstI CTGCAG 3 cut(s) 16, 79, 126
PstNI CAGNNNCTG 1 cut(s) 2945
PsuI RGATCY 4 cut(s) 1237, 1487, 1595, 2626
PvuII CAGCTG 1 cut(s) 711
RsaI GTAC 7 cut(s) 1342, 1614, 1984, 2117, 2689, 2725, 2860
RsaNI GTAC 7 cut(s) 1341, 1613, 1983, 2116, 2688, 2724, 2859
RseI CAYNNNNRTG 2 cut(s) 1623, 2562
SatI GCNGC 7 cut(s) 12, 122, 132, 187, 858, 2309, 2896
Sau96I GGNCC 6 cut(s) 36, 87, 129, 581, 1523, 2096
ScaI AGTACT 1 cut(s) 2725
SchI GAGTC 3 cut(s) 478, 562, 2747
ScrFI CCNGG 8 cut(s) 588, 679, 836, 1659, 1860, 2274, 2499, 2940
SduI GDGCHC 5 cut(s) 74, 883, 1936, 2326, 2749
SfaNI GCATC 6 cut(s) 65, 555, 663, 869, 1997, 2597
SfcI CTRYAG 5 cut(s) 12, 75, 122, 1808, 2727
SinI GGWCC 4 cut(s) 36, 87, 1523, 2096
SmiMI CAYNNNNRTG 2 cut(s) 1623, 2562
SmlI CTYRAG 2 cut(s) 507, 644
SmoI CTYRAG 2 cut(s) 507, 644
SpeI ACTAGT 1 cut(s) 2012
SphI GCATGC 1 cut(s) 56
SseBI AGGCCT 1 cut(s) 2884
SsiI CCGC 8 cut(s) 132, 1015, 1233, 1986, 2614, 2657, 2709, 3007
StuI AGGCCT 1 cut(s) 2884
StyD4I CCNGG 8 cut(s) 586, 677, 834, 1657, 1858, 2272, 2497, 2938
StyI CCWWGG 3 cut(s) 1344, 2342, 2433
TaiI ACGT 2 cut(s) 155, 1709
TaqI TCGA 6 cut(s) 59, 248, 385, 1214, 2763, 2972
TaqII GACCGA 1 cut(s) 1993
TatI WGTACW 2 cut(s) 2115, 2723
TauI GCSGC 1 cut(s) 134
TfiI GAWTC 2 cut(s) 1253, 1721
TseFI GTSAC 5 cut(s) 1059, 2147, 2428, 2672, 3030
TseI GCWGC 6 cut(s) 11, 121, 186, 857, 2308, 2895
Tsp45I GTSAC 5 cut(s) 1059, 2147, 2428, 2672, 3030
TspGWI ACGGA 3 cut(s) 1719, 2274, 2463
Van91I CCANNNNNTGG 2 cut(s) 593, 1350
VpaK11BI GGWCC 4 cut(s) 36, 87, 1523, 2096
XapI RAATTY 6 cut(s) 394, 525, 1548, 2040, 2085, 2316
XceI RCATGY 5 cut(s) 56, 275, 1573, 2638, 2845
XcmI CCANNNNNNNNNTGG 1 cut(s) 2090
XmiI GTMKAC 1 cut(s) 1026
XmnI GAANNNNTTC 3 cut(s) 423, 1876, 2263
ZrmI AGTACT 1 cut(s) 2725
Zsp2I ATGCAT 2 cut(s) 58, 2636
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.