SWIM zinc finger family protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr5g0069191 |
| rosa_samantha | Rh2AG124600 Rh2BG127800 Rh2CG128700 Rh4BG139000 Rh5CG495200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 188 |
| AciI | CCGC | 1 cut(s) | 310 |
| AgsI | TTSAA | 2 cut(s) | 55, 99 |
| AjnI | CCWGG | 1 cut(s) | 122 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 79, 111 |
| Ama87I | CYCGRG | 1 cut(s) | 140 |
| AoxI | GGCC | 1 cut(s) | 120 |
| AvaI | CYCGRG | 1 cut(s) | 140 |
| BanI | GGYRCC | 1 cut(s) | 188 |
| BccI | CCATC | 1 cut(s) | 262 |
| BciT130I | CCWGG | 1 cut(s) | 124 |
| BfaI | CTAG | 2 cut(s) | 171, 279 |
| BglII | AGATCT | 1 cut(s) | 109 |
| Bme1390I | CCNGG | 1 cut(s) | 124 |
| BmeT110I | CYCGRG | 1 cut(s) | 140 |
| BmiI | GGNNCC | 2 cut(s) | 155, 190 |
| BmrFI | CCNGG | 1 cut(s) | 124 |
| BmsI | GCATC | 1 cut(s) | 302 |
| BsaJI | CCNNGG | 1 cut(s) | 192 |
| Bse1I | ACTGG | 1 cut(s) | 46 |
| Bse3DI | GCAATG | 1 cut(s) | 221 |
| BseBI | CCWGG | 1 cut(s) | 124 |
| BseDI | CCNNGG | 1 cut(s) | 192 |
| BseMI | GCAATG | 1 cut(s) | 221 |
| BseNI | ACTGG | 1 cut(s) | 46 |
| BshFI | GGCC | 1 cut(s) | 122 |
| BshNI | GGYRCC | 1 cut(s) | 188 |
| BsiHKCI | CYCGRG | 1 cut(s) | 140 |
| BsnI | GGCC | 1 cut(s) | 122 |
| BsoBI | CYCGRG | 1 cut(s) | 140 |
| Bsp143I | GATC | 1 cut(s) | 109 |
| BspACI | CCGC | 1 cut(s) | 310 |
| BspANI | GGCC | 1 cut(s) | 122 |
| BspLI | GGNNCC | 2 cut(s) | 155, 190 |
| BspQI | GCTCTTC | 1 cut(s) | 276 |
| BspT107I | GGYRCC | 1 cut(s) | 188 |
| BsrDI | GCAATG | 1 cut(s) | 221 |
| BsrI | ACTGG | 1 cut(s) | 46 |
| BssECI | CCNNGG | 1 cut(s) | 192 |
| BssMI | GATC | 1 cut(s) | 109 |
| Bst2UI | CCWGG | 1 cut(s) | 124 |
| Bst4CI | ACNGT | 1 cut(s) | 193 |
| Bst6I | CTCTTC | 1 cut(s) | 276 |
| BstC8I | GCNNGC | 1 cut(s) | 314 |
| BstDSI | CCRYGG | 1 cut(s) | 192 |
| BstKTI | GATC | 1 cut(s) | 112 |
| BstMBI | GATC | 1 cut(s) | 109 |
| BstNI | CCWGG | 1 cut(s) | 124 |
| BstSCI | CCNGG | 1 cut(s) | 122 |
| BstX2I | RGATCY | 1 cut(s) | 109 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 216 |
| BstYI | RGATCY | 1 cut(s) | 109 |
| BsuRI | GGCC | 1 cut(s) | 122 |
| BtgI | CCRYGG | 1 cut(s) | 192 |
| BtsI | GCAGTG | 1 cut(s) | 209 |
| BtsIMutI | CAGTG | 1 cut(s) | 209 |
| Cac8I | GCNNGC | 1 cut(s) | 314 |
| CviAII | CATG | 1 cut(s) | 37 |
| CviJI | RGCY | 5 cut(s) | 72, 122, 176, 221, 253 |
| CviKI_1 | RGCY | 5 cut(s) | 72, 122, 176, 221, 253 |
| DpnI | GATC | 1 cut(s) | 111 |
| DpnII | GATC | 1 cut(s) | 109 |
| Eam1104I | CTCTTC | 1 cut(s) | 276 |
| EarI | CTCTTC | 1 cut(s) | 276 |
| Eco88I | CYCGRG | 1 cut(s) | 140 |
| EcoRII | CCWGG | 1 cut(s) | 122 |
| FaeI | CATG | 1 cut(s) | 40 |
| FaiI | YATR | 4 cut(s) | 7, 38, 131, 340 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 48, 80 |
| FatI | CATG | 1 cut(s) | 36 |
| FauI | CCCGC | 1 cut(s) | 317 |
| FspBI | CTAG | 2 cut(s) | 171, 279 |
| HaeIII | GGCC | 1 cut(s) | 122 |
| Hin1II | CATG | 1 cut(s) | 40 |
| HinfI | GANTC | 1 cut(s) | 95 |
| Hpy166II | GTNNAC | 1 cut(s) | 199 |
| Hpy188III | TCNNGA | 2 cut(s) | 225, 330 |
| Hpy8I | GTNNAC | 1 cut(s) | 199 |
| HpyAV | CCTTC | 2 cut(s) | 42, 285 |
| HpyCH4III | ACNGT | 1 cut(s) | 193 |
| HpyCH4V | TGCA | 3 cut(s) | 133, 214, 293 |
| Hsp92II | CATG | 1 cut(s) | 40 |
| Kzo9I | GATC | 1 cut(s) | 109 |
| LguI | GCTCTTC | 1 cut(s) | 276 |
| LpnPI | CCDG | 5 cut(s) | 59, 109, 136, 225, 238 |
| LweI | GCATC | 1 cut(s) | 302 |
| MaeI | CTAG | 2 cut(s) | 171, 279 |
| MaeIII | GTNAC | 1 cut(s) | 166 |
| MalI | GATC | 1 cut(s) | 111 |
| MboI | GATC | 1 cut(s) | 109 |
| MboII | GAAGA | 3 cut(s) | 263, 330, 333 |
| MflI | RGATCY | 1 cut(s) | 109 |
| MluCI | AATT | 1 cut(s) | 99 |
| MmeI | TCCRAC | 1 cut(s) | 226 |
| MnlI | CCTC | 1 cut(s) | 85 |
| MseI | TTAA | 1 cut(s) | 335 |
| MslI | CAYNNNNRTG | 1 cut(s) | 214 |
| MspR9I | CCNGG | 1 cut(s) | 124 |
| MvaI | CCWGG | 1 cut(s) | 124 |
| NdeII | GATC | 1 cut(s) | 109 |
| NlaIII | CATG | 1 cut(s) | 40 |
| NlaIV | GGNNCC | 2 cut(s) | 155, 190 |
| NmuCI | GTSAC | 1 cut(s) | 166 |
| PaeR7I | CTCGAG | 1 cut(s) | 140 |
| PciSI | GCTCTTC | 1 cut(s) | 276 |
| PfeI | GAWTC | 1 cut(s) | 95 |
| Psp6I | CCWGG | 1 cut(s) | 122 |
| PspGI | CCWGG | 1 cut(s) | 122 |
| PspN4I | GGNNCC | 2 cut(s) | 155, 190 |
| PspXI | VCTCGAGB | 1 cut(s) | 140 |
| PsuI | RGATCY | 1 cut(s) | 109 |
| RseI | CAYNNNNRTG | 1 cut(s) | 214 |
| SapI | GCTCTTC | 1 cut(s) | 276 |
| SaqAI | TTAA | 1 cut(s) | 335 |
| Sau3AI | GATC | 1 cut(s) | 109 |
| ScrFI | CCNGG | 1 cut(s) | 124 |
| SetI | ASST | 4 cut(s) | 25, 34, 159, 244 |
| SfaNI | GCATC | 1 cut(s) | 302 |
| Sfr274I | CTCGAG | 1 cut(s) | 140 |
| SlaI | CTCGAG | 1 cut(s) | 140 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 214 |
| SmlI | CTYRAG | 1 cut(s) | 140 |
| SmoI | CTYRAG | 1 cut(s) | 140 |
| Sse9I | AATT | 1 cut(s) | 99 |
| SsiI | CCGC | 1 cut(s) | 310 |
| SspMI | CTAG | 2 cut(s) | 171, 279 |
| StyD4I | CCNGG | 1 cut(s) | 122 |
| TaaI | ACNGT | 1 cut(s) | 193 |
| TaqI | TCGA | 1 cut(s) | 141 |
| TasI | AATT | 1 cut(s) | 99 |
| TfiI | GAWTC | 1 cut(s) | 95 |
| Tru1I | TTAA | 1 cut(s) | 335 |
| Tru9I | TTAA | 1 cut(s) | 335 |
| TscAI | CASTG | 1 cut(s) | 216 |
| TseFI | GTSAC | 1 cut(s) | 166 |
| Tsp45I | GTSAC | 1 cut(s) | 166 |
| TspGWI | ACGGA | 1 cut(s) | 166 |
| TspRI | CASTG | 1 cut(s) | 216 |
| XhoI | CTCGAG | 1 cut(s) | 140 |
| XspI | CTAG | 2 cut(s) | 171, 279 |