Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0016734

Physical Location & Seq

Genomic Coordinates Reverse (-)

16884083 .. 16885791

Gene Structure 1709 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG182900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1620 bp

ATGCCTAATAATGATAATCAGGTTATTTCAGGTAAGCCTGAAACTCTGTTTCCCAACTCATTATTCCGCAACAAGGAGGACGGGATCAAACTGGCCCTAGAAGATCAACTATGCCGAGACTTCCAACTTCCATGGTCGGACGAAGAAGAGGAGCAAGAGGGGCTCGTCACCCAACGCCCCAAAATCACCACTGTGGTTTTTGACGAAATTAAGGCACTGTACACTCTTGCCATCCCCATGATCTTATCCGGCCTCTTAAACTACTCAAAGGCAGCCATCTCCATGTTTTTCATGGGGAAGCTTGGGAAATCTGCTCTGGCAGGAGGAAGCCTCGCCATAGGTGTTGCAAACATCACCGGATACTCTTTCATCTCCGGTCTCGCTACAGGGATGGATGGAATCGCTTCACAAGCATTTGGTGCTCGTAACGGCTGTCTTCTGTCACACACTCTACAGAGGACAATAGTTCTCCTACTCATCCTTTGCATGCCCATCACTTTGTTGTGGTATAACTTCGAATCTGTCCTTATCCACTCTGGCCAAAACCCATCCATCTCATCCATAGCCATTACCTATCTCAGATTCTCCATCCCAACCCTCTTGTTTCAGTCCCTCATCCACCCCATTAAAATTTACCTAAGGAGCCAGAAAGTCACCAGCCCTTTTACGCTCAGCACTGCCTTTTCGCTAGCCGTTCACATCCCAGCCAACTACGTCGCCGTTTACTGTCTTGACCTTGGCCTGGAAGGGATTGCACTCTCCGGTTGCTTGGCCGACTTCAATATCATGATGTCTCTTCTGGTTTATCTCTTTTTTTCTGGCCATCTTACTGTGAATTCTCTGTGGTTCTGGAGAGACTGTGCGTCGTTTAGACACTATGAAGATTGGAGCCCCATTTTCAGTCTGGCGCTTCCGAGTTGCGCGTCGGTGTGTTTAGAGTGGTGGTGGTATGAGATCATGATTGTTTTCTCTGGACTTCTTGTCAATGCACCCGAGGCTGTGGCCACCATGGGAATACTGATCCAGATGACCGCATTGATCTATCAGTTTCCTATCTCGTTGAACCAGGCCGTGTCGACTAGGGTGGGGAACGAGTTGGGGGCCGACAGACCGAAGCAAGCTCTGATGGCGTCTGTAGTTGCACTGGCATGTGCTATTTTCACAGGCATTGTCGCCATGAGTTTCATGATCGGAATGCGCAACGTTTGGGGGGGAATGTTCACGTCTGATCAGGCCATTATATCGCTGGTGGCTTCGGTCTTGCCGGTGGTAGGGCTTTGTGAGCTCGGGAACTGCCCCCAGACCACCGTCTGTGGAGTTTTGAGAGGCTGTGCACGGCCAACTTTGGCTGCTTACATAAACTTCGGCTCGTTTTATGGTGTGGGATTGCCTGCGGCCCTTATGTTGGGCTTTGGGGTGGAGTTGGGCTTATTGGGCCTGTGGTTGGGCTTACTTGCGGCCCAAATGGTTTGCTTTGGGATCATGGTAGTGGCATTACTTCGAACGGACTGGGAGGAACAAGCAAATCGAGCATATGTACTCACATGTAGCTATCTAGGGGAGGAAGAAAATGAAACAAGCAAGGAAGAACCAGCACCTCCGGTTGTGGTTGTGAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005451 GO:0005575 GO:0006810 GO:0006811 GO:0006812 GO:0006855 GO:0008150 GO:0008324 GO:0015075 GO:0015077 GO:0015078 GO:0015238 GO:0015291 GO:0015297 GO:0015298 GO:0015299 GO:0015318 GO:0015491 GO:0015672 GO:0015695 GO:0015893 GO:0022804 GO:0022857 GO:0022890 GO:0031982 GO:0034220 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0098655 GO:0098660 GO:0098662 GO:0099516 GO:1902600

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MatE

Protein Analysis

539

Amino Acids

58.75

Weight (kDa)

5.04

Isoelectric Point (pI)

39.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MatE	PF01554	79 - 239	4e-29	MatE
MatE	PF01554	305 - 466	2.9e-29	MatE

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016734)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g15940 FvH4_1g15940
malus_domestica	MD15G1282700.v1.1
prunus_persica	Prupe.7G134400_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0105331
rosa_laevigata	RLG00000017417
rosa_multiflora	Rmu_sc0001407.1_g000017
rosa_roxburghii	Rroxscaffold_2G00138280
rosa_rugosa	Rorug02G0127700
rosa_samantha	Rh2AG178300 Rh2BG186800 Rh2CG182900 Rh2DG184300
rosa_wichuraiana	Rw2G014000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1199
AccI	GTMKAC	1 cut(s)	1076
AccII	CGCG	1 cut(s)	923
AciI	CCGC	4 cut(s)	67, 1032, 1394, 1457
AclI	AACGTT	1 cut(s)	1203
AclWI	GGATC	3 cut(s)	92, 1015, 1487
AcoI	YGGCCR	5 cut(s)	538, 771, 820, 1002, 1337
AcsI	RAATTY	2 cut(s)	630, 835
AcyI	GRCGYC	1 cut(s)	1130
AfaI	GTAC	2 cut(s)	221, 1539
AfiI	CCNNNNNNNGG	5 cut(s)	73, 742, 1271, 1405, 1444
AflIII	ACRYGT	1 cut(s)	1544
AgsI	TTSAA	2 cut(s)	781, 1063
AhdI	GACNNNNNGTC	2 cut(s)	862, 980
AjiI	CACGTC	1 cut(s)	1224
AjnI	CCWGG	2 cut(s)	741, 1065
AjuI	GAANNNNNNNTTGG	2 cut(s)	47, 79
AleI	CACNNNNGTG	1 cut(s)	191
AluBI	AGCT	4 cut(s)	301, 1121, 1285, 1551
AluI	AGCT	4 cut(s)	301, 1121, 1285, 1551
Alw21I	GWGCWC	3 cut(s)	424, 1287, 1336
Alw26I	GTCTC	4 cut(s)	111, 383, 798, 849
Alw44I	GTGCAC	1 cut(s)	1332
AlwI	GGATC	3 cut(s)	92, 1015, 1487
Ama87I	CYCGRG	2 cut(s)	992, 1286
ApaLI	GTGCAC	1 cut(s)	1332
ApeKI	GCWGC	2 cut(s)	272, 1349
ApoI	RAATTY	2 cut(s)	630, 835
Asp700I	GAANNNNTTC	1 cut(s)	403
AspLEI	GCGC	3 cut(s)	910, 923, 1200
AspS9I	GGNCC	5 cut(s)	94, 1101, 1396, 1435, 1459
AsuHPI	GGTGA	4 cut(s)	160, 178, 346, 646
AsuII	TTCGAA	2 cut(s)	516, 1501
AsuNHI	GCTAGC	1 cut(s)	688
AvaI	CYCGRG	2 cut(s)	992, 1286
AxyI	CCTNAGG	1 cut(s)	638
BaeGI	GKGCMC	1 cut(s)	1336
BalI	TGGCCA	3 cut(s)	540, 822, 1004
BanII	GRGCYC	3 cut(s)	165, 893, 1287
BbsI	GAAGAC	1 cut(s)	428
Bbv12I	GWGCWC	3 cut(s)	424, 1287, 1336
BbvI	GCAGC	2 cut(s)	284, 1336
BceAI	ACGGC	5 cut(s)	445, 677, 704, 1055, 1352
BciT130I	CCWGG	2 cut(s)	743, 1067
BciVI	GTATCC	1 cut(s)	353
BclI	TGATCA	1 cut(s)	1228
BcoDI	GTCTC	4 cut(s)	111, 383, 798, 849
BfaI	CTAG	5 cut(s)	98, 689, 1080, 1556, 1618
BfmI	CTRYAG	3 cut(s)	384, 452, 1134
BfoI	RGCGCY	1 cut(s)	911
BfuI	GTATCC	1 cut(s)	353
BisI	GCNGC	4 cut(s)	273, 1350, 1395, 1458
BlpI	GCTNAGC	1 cut(s)	671
BlsI	GCNGC	4 cut(s)	274, 1351, 1396, 1459
Bme1390I	CCNGG	2 cut(s)	743, 1067
BmeRI	GACNNNNNGTC	2 cut(s)	862, 980
BmeT110I	CYCGRG	2 cut(s)	992, 1286
BmgBI	CACGTC	1 cut(s)	1224
BmgT120I	GGNCC	5 cut(s)	94, 1101, 1396, 1435, 1459
BmiI	GGNNCC	3 cut(s)	644, 890, 1102
BmrFI	CCNGG	2 cut(s)	743, 1067
BmrI	ACTGGG	1 cut(s)	1519
BmtI	GCTAGC	1 cut(s)	692
BmuI	ACTGGG	1 cut(s)	1519
BoxI	GACNNNNGTC	1 cut(s)	1307
BpiI	GAAGAC	1 cut(s)	428
BplI	GAGNNNNNCTC	2 cut(s)	315, 347
BpmI	CTGGAG	1 cut(s)	871
Bpu1102I	GCTNAGC	1 cut(s)	671
Bpu14I	TTCGAA	2 cut(s)	516, 1501
BsaHI	GRCGYC	1 cut(s)	1130
BsaI	GGTCTC	1 cut(s)	383
BsaJI	CCNNGG	4 cut(s)	131, 736, 993, 1008
BsaWI	WCCGGW	4 cut(s)	356, 374, 761, 1600
BsaXI	ACNNNNNCTCC	2 cut(s)	844, 874
Bsc4I	CCNNNNNNNGG	5 cut(s)	73, 742, 1271, 1405, 1444
Bse118I	RCCGGY	1 cut(s)	1264
Bse1I	ACTGG	3 cut(s)	96, 1149, 1514
Bse21I	CCTNAGG	1 cut(s)	638
BseBI	CCWGG	2 cut(s)	743, 1067
BseDI	CCNNGG	4 cut(s)	131, 736, 993, 1008
BseGI	GGATG	9 cut(s)	231, 396, 400, 477, 548, 557, 588, 615, 699
BseLI	CCNNNNNNNGG	5 cut(s)	73, 742, 1271, 1405, 1444
BseMII	CTCAG	2 cut(s)	592, 685
BseNI	ACTGG	3 cut(s)	96, 1149, 1514
BseRI	GAGGAG	1 cut(s)	164
BseSI	GKGCMC	1 cut(s)	1336
BseXI	GCAGC	2 cut(s)	284, 1336
BseYI	CCCAGC	1 cut(s)	703
Bsh1236I	CGCG	1 cut(s)	923
BsiHKAI	GWGCWC	3 cut(s)	424, 1287, 1336
BsiHKCI	CYCGRG	2 cut(s)	992, 1286
BsiSI	CCGG	6 cut(s)	249, 357, 375, 762, 1265, 1601
BslFI	GGGAC	1 cut(s)	595
BslI	CCNNNNNNNGG	5 cut(s)	73, 742, 1271, 1405, 1444
BsmAI	GTCTC	4 cut(s)	111, 383, 798, 849
BsmFI	GGGAC	1 cut(s)	595
BsmI	GAATGC	1 cut(s)	1200
Bso31I	GGTCTC	1 cut(s)	383
BsoBI	CYCGRG	2 cut(s)	992, 1286
Bsp119I	TTCGAA	2 cut(s)	516, 1501
Bsp1286I	GDGCHC	5 cut(s)	165, 424, 893, 1287, 1336
Bsp1407I	TGTACA	1 cut(s)	219
Bsp143I	GATC	9 cut(s)	84, 103, 240, 954, 1020, 1038, 1188, 1228, 1479
Bsp1720I	GCTNAGC	1 cut(s)	671
Bsp19I	CCATGG	2 cut(s)	131, 1008
BspACI	CCGC	4 cut(s)	67, 1032, 1394, 1457
BspCNI	CTCAG	2 cut(s)	591, 684
BspFNI	CGCG	1 cut(s)	923
BspHI	TCATGA	3 cut(s)	786, 957, 1185
BspLI	GGNNCC	3 cut(s)	644, 890, 1102
BspOI	GCTAGC	1 cut(s)	692
BspPI	GGATC	3 cut(s)	92, 1015, 1487
BspT104I	TTCGAA	2 cut(s)	516, 1501
BspTNI	GGTCTC	1 cut(s)	383
BsrFI	RCCGGY	1 cut(s)	1264
BsrGI	TGTACA	1 cut(s)	219
BsrI	ACTGG	3 cut(s)	96, 1149, 1514
BssAI	RCCGGY	1 cut(s)	1264
BssECI	CCNNGG	4 cut(s)	131, 736, 993, 1008
BssMI	GATC	9 cut(s)	84, 103, 240, 954, 1020, 1038, 1188, 1228, 1479
BssNI	GRCGYC	1 cut(s)	1130
BssT1I	CCWWGG	3 cut(s)	131, 736, 1008
Bst2UI	CCWGG	2 cut(s)	743, 1067
Bst4CI	ACNGT	6 cut(s)	193, 219, 728, 832, 860, 1309
Bst6I	CTCTTC	2 cut(s)	141, 801
BstACI	GRCGYC	1 cut(s)	1130
BstAPI	GCANNNNNTGC	1 cut(s)	419
BstAUI	TGTACA	1 cut(s)	219
BstBI	TTCGAA	2 cut(s)	516, 1501
BstC8I	GCNNGC	4 cut(s)	488, 690, 1119, 1392
BstDEI	CTNAG	3 cut(s)	578, 638, 671
BstDSI	CCRYGG	2 cut(s)	131, 1008
BstF5I	GGATG	9 cut(s)	231, 396, 400, 477, 548, 557, 588, 615, 699
BstFNI	CGCG	1 cut(s)	923
BstH2I	RGCGCY	1 cut(s)	911
BstHHI	GCGC	3 cut(s)	910, 923, 1200
BstKTI	GATC	9 cut(s)	87, 106, 243, 957, 1023, 1041, 1191, 1231, 1482
BstMAI	GTCTC	4 cut(s)	111, 383, 798, 849
BstMBI	GATC	9 cut(s)	84, 103, 240, 954, 1020, 1038, 1188, 1228, 1479
BstMWI	GCNNNNNNNGC	8 cut(s)	160, 410, 419, 995, 1127, 1282, 1434, 1529
BstNI	CCWGG	2 cut(s)	743, 1067
BstNSI	RCATGY	3 cut(s)	490, 1152, 1548
BstPAI	GACNNNNGTC	1 cut(s)	1307
BstSCI	CCNGG	2 cut(s)	741, 1065
BstSFI	CTRYAG	3 cut(s)	384, 452, 1134
BstSLI	GKGCMC	1 cut(s)	1336
BstUI	CGCG	1 cut(s)	923
BstV1I	GCAGC	2 cut(s)	284, 1336
BstV2I	GAAGAC	1 cut(s)	428
Bsu36I	CCTNAGG	1 cut(s)	638
BsuI	GTATCC	1 cut(s)	353
BtgI	CCRYGG	2 cut(s)	131, 1008
BtrI	CACGTC	1 cut(s)	1224
BtsCI	GGATG	9 cut(s)	231, 396, 400, 477, 548, 557, 588, 615, 699
BtsI	GCAGTG	1 cut(s)	675
BtsIMutI	CAGTG	4 cut(s)	189, 215, 675, 1142
Cac8I	GCNNGC	4 cut(s)	488, 690, 1119, 1392
CciI	TCATGA	3 cut(s)	786, 957, 1185
CfoI	GCGC	3 cut(s)	910, 923, 1200
Cfr10I	RCCGGY	1 cut(s)	1264
Cfr13I	GGNCC	5 cut(s)	94, 1101, 1396, 1435, 1459
CseI	GACGC	3 cut(s)	852, 912, 1119
Csp6I	GTAC	2 cut(s)	220, 1538
CviQI	GTAC	2 cut(s)	220, 1538
DdeI	CTNAG	3 cut(s)	578, 638, 671
DpnI	GATC	9 cut(s)	86, 105, 242, 956, 1022, 1040, 1190, 1230, 1481
DpnII	GATC	9 cut(s)	84, 103, 240, 954, 1020, 1038, 1188, 1228, 1479
DriI	GACNNNNNGTC	2 cut(s)	862, 980
EaeI	YGGCCR	5 cut(s)	538, 771, 820, 1002, 1337
Eam1104I	CTCTTC	2 cut(s)	141, 801
Eam1105I	GACNNNNNGTC	2 cut(s)	862, 980
EarI	CTCTTC	2 cut(s)	141, 801
Ecl136II	GAGCTC	1 cut(s)	1285
Eco130I	CCWWGG	3 cut(s)	131, 736, 1008
Eco24I	GRGCYC	3 cut(s)	165, 893, 1287
Eco31I	GGTCTC	1 cut(s)	383
Eco53kI	GAGCTC	1 cut(s)	1285
Eco81I	CCTNAGG	1 cut(s)	638
Eco88I	CYCGRG	2 cut(s)	992, 1286
EcoICRI	GAGCTC	1 cut(s)	1285
EcoRI	GAATTC	1 cut(s)	835
EcoRII	CCWGG	2 cut(s)	741, 1065
EcoT14I	CCWWGG	3 cut(s)	131, 736, 1008
EcoT38I	GRGCYC	3 cut(s)	165, 893, 1287
ErhI	CCWWGG	3 cut(s)	131, 736, 1008
FaqI	GGGAC	1 cut(s)	595
FauNDI	CATATG	1 cut(s)	1534
FbaI	TGATCA	1 cut(s)	1228
FblI	GTMKAC	1 cut(s)	1076
Fnu4HI	GCNGC	4 cut(s)	273, 1350, 1395, 1458
FokI	GGATG	9 cut(s)	218, 403, 407, 464, 535, 544, 575, 602, 686
FriOI	GRGCYC	3 cut(s)	165, 893, 1287
Fsp4HI	GCNGC	4 cut(s)	273, 1350, 1395, 1458
FspBI	CTAG	5 cut(s)	98, 689, 1080, 1556, 1618
FspI	TGCGCA	1 cut(s)	1199
GlaI	GCGC	3 cut(s)	909, 922, 1199
GluI	GCNGC	4 cut(s)	273, 1350, 1395, 1458
GsaI	CCCAGC	1 cut(s)	707
GsuI	CTGGAG	1 cut(s)	871
HaeII	RGCGCY	1 cut(s)	911
HapII	CCGG	6 cut(s)	249, 357, 375, 762, 1265, 1601
HgaI	GACGC	3 cut(s)	852, 912, 1119
HhaI	GCGC	3 cut(s)	910, 923, 1200
Hin1I	GRCGYC	1 cut(s)	1130
Hin6I	GCGC	3 cut(s)	908, 921, 1198
HinP1I	GCGC	3 cut(s)	908, 921, 1198
HincII	GTYRAC	1 cut(s)	1077
HindII	GTYRAC	1 cut(s)	1077
HindIII	AAGCTT	1 cut(s)	299
HinfI	GANTC	3 cut(s)	399, 518, 582
HpaII	CCGG	6 cut(s)	249, 357, 375, 762, 1265, 1601
HphI	GGTGA	4 cut(s)	160, 178, 346, 646
Hpy166II	GTNNAC	7 cut(s)	222, 697, 724, 1077, 1221, 1334, 1615
Hpy188I	TCNGA	6 cut(s)	139, 581, 915, 1125, 1193, 1228
Hpy188III	TCNNGA	8 cut(s)	731, 787, 850, 958, 972, 1024, 1186, 1288
Hpy8I	GTNNAC	7 cut(s)	222, 697, 724, 1077, 1221, 1334, 1615
Hpy99I	CGWCG	3 cut(s)	719, 868, 928
HpyAV	CCTTC	1 cut(s)	740
HpyCH4III	ACNGT	6 cut(s)	193, 219, 728, 832, 860, 1309
HpyCH4IV	ACGT	3 cut(s)	714, 1203, 1223
HpyCH4V	TGCA	6 cut(s)	347, 486, 755, 989, 1142, 1334
HpyF10VI	GCNNNNNNNGC	8 cut(s)	160, 410, 419, 995, 1127, 1282, 1434, 1529
HpyF3I	CTNAG	3 cut(s)	578, 638, 671
HpySE526I	ACGT	3 cut(s)	714, 1203, 1223
Hsp92I	GRCGYC	1 cut(s)	1130
HspAI	GCGC	3 cut(s)	908, 921, 1198
Ksp22I	TGATCA	1 cut(s)	1228
Kzo9I	GATC	9 cut(s)	84, 103, 240, 954, 1020, 1038, 1188, 1228, 1479
LmnI	GCTCC	3 cut(s)	151, 642, 888
Lsp1109I	GCAGC	2 cut(s)	284, 1336
MaeI	CTAG	5 cut(s)	98, 689, 1080, 1556, 1618
MaeII	ACGT	3 cut(s)	714, 1203, 1223
MaeIII	GTNAC	4 cut(s)	166, 425, 441, 652
MalI	GATC	9 cut(s)	86, 105, 242, 956, 1022, 1040, 1190, 1230, 1481
MboI	GATC	9 cut(s)	84, 103, 240, 954, 1020, 1038, 1188, 1228, 1479
MboII	GAAGA	8 cut(s)	113, 155, 158, 428, 788, 893, 1577, 1598
MhlI	GDGCHC	5 cut(s)	165, 424, 893, 1287, 1336
MlsI	TGGCCA	3 cut(s)	540, 822, 1004
MluCI	AATT	3 cut(s)	207, 630, 835
MluNI	TGGCCA	3 cut(s)	540, 822, 1004
MmeI	TCCRAC	2 cut(s)	117, 148
Mox20I	TGGCCA	3 cut(s)	540, 822, 1004
MroXI	GAANNNNTTC	1 cut(s)	403
MscI	TGGCCA	3 cut(s)	540, 822, 1004
MseI	TTAA	3 cut(s)	210, 257, 627
MslI	CAYNNNNRTG	5 cut(s)	191, 236, 281, 1147, 1487
Msp20I	TGGCCA	3 cut(s)	540, 822, 1004
MspI	CCGG	6 cut(s)	249, 357, 375, 762, 1265, 1601
MspR9I	CCNGG	2 cut(s)	743, 1067
Mva1269I	GAATGC	1 cut(s)	1200
MvaI	CCWGG	2 cut(s)	743, 1067
MvnI	CGCG	1 cut(s)	923
MwoI	GCNNNNNNNGC	8 cut(s)	160, 410, 419, 995, 1127, 1282, 1434, 1529
NcoI	CCATGG	2 cut(s)	131, 1008
NdeI	CATATG	1 cut(s)	1534
NdeII	GATC	9 cut(s)	84, 103, 240, 954, 1020, 1038, 1188, 1228, 1479
NheI	GCTAGC	1 cut(s)	688
NlaIV	GGNNCC	3 cut(s)	644, 890, 1102
NmeAIII	GCCGAG	1 cut(s)	140
NmuCI	GTSAC	3 cut(s)	166, 441, 652
NsbI	TGCGCA	1 cut(s)	1199
NspI	RCATGY	3 cut(s)	490, 1152, 1548
NspV	TTCGAA	2 cut(s)	516, 1501
OliI	CACNNNNGTG	1 cut(s)	191
PaeI	GCATGC	1 cut(s)	490
PagI	TCATGA	3 cut(s)	786, 957, 1185
PciI	ACATGT	1 cut(s)	1544
PctI	GAATGC	1 cut(s)	1200
PdmI	GAANNNNTTC	1 cut(s)	403
PfeI	GAWTC	3 cut(s)	399, 518, 582
PkrI	GCNGC	4 cut(s)	274, 1351, 1396, 1459
PscI	ACATGT	1 cut(s)	1544
PshAI	GACNNNNGTC	1 cut(s)	1307
Psp124BI	GAGCTC	1 cut(s)	1287
Psp1406I	AACGTT	1 cut(s)	1203
Psp6I	CCWGG	2 cut(s)	741, 1065
PspFI	CCCAGC	1 cut(s)	703
PspGI	CCWGG	2 cut(s)	741, 1065
PspN4I	GGNNCC	3 cut(s)	644, 890, 1102
PspPI	GGNCC	5 cut(s)	94, 1101, 1396, 1435, 1459
RsaI	GTAC	2 cut(s)	221, 1539
RsaNI	GTAC	2 cut(s)	220, 1538
RseI	CAYNNNNRTG	5 cut(s)	191, 236, 281, 1147, 1487
SacI	GAGCTC	1 cut(s)	1287
SalI	GTCGAC	1 cut(s)	1075
SaqAI	TTAA	3 cut(s)	210, 257, 627
SatI	GCNGC	4 cut(s)	273, 1350, 1395, 1458
Sau3AI	GATC	9 cut(s)	84, 103, 240, 954, 1020, 1038, 1188, 1228, 1479
Sau96I	GGNCC	5 cut(s)	94, 1101, 1396, 1435, 1459
ScrFI	CCNGG	2 cut(s)	743, 1067
SduI	GDGCHC	5 cut(s)	165, 424, 893, 1287, 1336
SfcI	CTRYAG	3 cut(s)	384, 452, 1134
SfuI	TTCGAA	2 cut(s)	516, 1501
SmiMI	CAYNNNNRTG	5 cut(s)	191, 236, 281, 1147, 1487
SphI	GCATGC	1 cut(s)	490
Sse9I	AATT	3 cut(s)	207, 630, 835
SsiI	CCGC	4 cut(s)	67, 1032, 1394, 1457
SspMI	CTAG	5 cut(s)	98, 689, 1080, 1556, 1618
SstI	GAGCTC	1 cut(s)	1287
StyD4I	CCNGG	2 cut(s)	741, 1065
StyI	CCWWGG	3 cut(s)	131, 736, 1008
TaaI	ACNGT	6 cut(s)	193, 219, 728, 832, 860, 1309
TaiI	ACGT	3 cut(s)	717, 1206, 1226
TaqI	TCGA	4 cut(s)	516, 1076, 1501, 1528
TaqII	GACCGA	2 cut(s)	1126, 1246
TasI	AATT	3 cut(s)	207, 630, 835
TatI	WGTACW	2 cut(s)	219, 1537
TauI	GCSGC	2 cut(s)	1397, 1460
TfiI	GAWTC	3 cut(s)	399, 518, 582
Tru1I	TTAA	3 cut(s)	210, 257, 627
Tru9I	TTAA	3 cut(s)	210, 257, 627
TscAI	CASTG	4 cut(s)	196, 222, 682, 1149
TseFI	GTSAC	3 cut(s)	166, 441, 652
TseI	GCWGC	2 cut(s)	272, 1349
Tsp45I	GTSAC	3 cut(s)	166, 441, 652
TspDTI	ATGAA	5 cut(s)	280, 358, 894, 1174, 1587
TspGWI	ACGGA	1 cut(s)	1520
TspRI	CASTG	4 cut(s)	196, 222, 682, 1149
VneI	GTGCAC	1 cut(s)	1332
XapI	RAATTY	2 cut(s)	630, 835
XceI	RCATGY	3 cut(s)	490, 1152, 1548
XcmI	CCANNNNNNNNNTGG	3 cut(s)	289, 901, 1243
XmiI	GTMKAC	1 cut(s)	1076
XmnI	GAANNNNTTC	1 cut(s)	403
XspI	CTAG	5 cut(s)	98, 689, 1080, 1556, 1618

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.