Rh2CG357800

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
Physical Location & Seq
Reverse (-)
48442229 .. 48442891
663 bp
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UTR
Exon/CDS
Intron
Rh2CG357800.1

Sequence Viewer

Length: 192 bp
ATGAAGAAGGCCCTCTGTATAAATAAGCAAAGCATTGGCGCCAGTGGAGGCGAGTCTCGGAGTCCAACGGCAGAGGTGGTTTCTCAGATTCAAATCTCGACGGAGCACAACTCATCAAAGAAAAACAACATAGAAGGAGAAAATTTTGTGCTCGGACATAATGATAGGAATAATACAGGACACACGGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

63

Amino Acids

6.78

Weight (kDa)

6.82

Isoelectric Point (pI)

66.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0025617)

Species Orthologous Gene IDs
rosa_multiflora Rmu_sc0007475.1_g000005
rosa_samantha Rh2BG378900 Rh2CG357800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 38
AcsI RAATTY 1 cut(s) 142
AcyI GRCGYC 1 cut(s) 39
AgsI TTSAA 1 cut(s) 92
Alw21I GWGCWC 2 cut(s) 108, 153
Alw26I GTCTC 1 cut(s) 60
AoxI GGCC 1 cut(s) 9
ApoI RAATTY 1 cut(s) 142
AspLEI GCGC 1 cut(s) 41
AspS9I GGNCC 1 cut(s) 10
BanI GGYRCC 1 cut(s) 38
Bbv12I GWGCWC 2 cut(s) 108, 153
BceAI ACGGC 1 cut(s) 84
BcoDI GTCTC 1 cut(s) 60
BfoI RGCGCY 1 cut(s) 42
BmgT120I GGNCC 1 cut(s) 10
BmiI GGNNCC 1 cut(s) 40
BplI GAGNNNNNCTC 2 cut(s) 95, 127
BsaBI GATNNNNATC 1 cut(s) 92
BsaHI GRCGYC 1 cut(s) 39
Bse1I ACTGG 1 cut(s) 42
Bse8I GATNNNNATC 1 cut(s) 92
BseJI GATNNNNATC 1 cut(s) 92
BseMII CTCAG 1 cut(s) 98
BseNI ACTGG 1 cut(s) 42
BshFI GGCC 1 cut(s) 11
BshNI GGYRCC 1 cut(s) 38
BsiHKAI GWGCWC 2 cut(s) 108, 153
BsmAI GTCTC 1 cut(s) 60
BsnI GGCC 1 cut(s) 11
Bsp1286I GDGCHC 2 cut(s) 108, 153
BspANI GGCC 1 cut(s) 11
BspCNI CTCAG 1 cut(s) 97
BspLI GGNNCC 1 cut(s) 40
BspT107I GGYRCC 1 cut(s) 38
BsrI ACTGG 1 cut(s) 42
BssNI GRCGYC 1 cut(s) 39
BstACI GRCGYC 1 cut(s) 39
BstDEI CTNAG 1 cut(s) 84
BstH2I RGCGCY 1 cut(s) 42
BstHHI GCGC 1 cut(s) 41
BstMAI GTCTC 1 cut(s) 60
BsuRI GGCC 1 cut(s) 11
BtsIMutI CAGTG 1 cut(s) 49
CfoI GCGC 1 cut(s) 41
Cfr13I GGNCC 1 cut(s) 10
CviJI RGCY 1 cut(s) 11
CviKI_1 RGCY 1 cut(s) 11
DdeI CTNAG 1 cut(s) 84
DinI GGCGCC 1 cut(s) 40
EcoO109I RGGNCCY 1 cut(s) 10
EgeI GGCGCC 1 cut(s) 40
EheI GGCGCC 1 cut(s) 40
FaiI YATR 3 cut(s) 20, 131, 159
GlaI GCGC 1 cut(s) 40
HaeII RGCGCY 1 cut(s) 42
HaeIII GGCC 1 cut(s) 11
HhaI GCGC 1 cut(s) 41
Hin1I GRCGYC 1 cut(s) 39
Hin6I GCGC 1 cut(s) 39
HinP1I GCGC 1 cut(s) 39
HinfI GANTC 3 cut(s) 53, 61, 88
Hpy188I TCNGA 3 cut(s) 60, 87, 155
Hpy188III TCNNGA 1 cut(s) 97
Hpy99I CGWCG 1 cut(s) 103
HpyAV CCTTC 1 cut(s) 128
HpyF3I CTNAG 1 cut(s) 84
Hsp92I GRCGYC 1 cut(s) 39
HspAI GCGC 1 cut(s) 39
KasI GGCGCC 1 cut(s) 38
LmnI GCTCC 1 cut(s) 103
LpnPI CCDG 2 cut(s) 55, 162
MboII GAAGA 1 cut(s) 16
MhlI GDGCHC 2 cut(s) 108, 153
MluCI AATT 1 cut(s) 142
Mly113I GGCGCC 1 cut(s) 39
MlyI GAGTC 2 cut(s) 62, 70
MmeI TCCRAC 1 cut(s) 89
MnlI CCTC 3 cut(s) 23, 41, 67
NarI GGCGCC 1 cut(s) 39
NlaIV GGNNCC 1 cut(s) 40
PfeI GAWTC 1 cut(s) 88
PleI GAGTC 2 cut(s) 61, 69
PluTI GGCGCC 1 cut(s) 42
PpsI GAGTC 2 cut(s) 61, 69
PspN4I GGNNCC 1 cut(s) 40
PspPI GGNCC 1 cut(s) 10
Sau96I GGNCC 1 cut(s) 10
SchI GAGTC 2 cut(s) 62, 70
SduI GDGCHC 2 cut(s) 108, 153
SetI ASST 1 cut(s) 78
SfoI GGCGCC 1 cut(s) 40
SgeI CNNG 5 cut(s) 54, 64, 69, 109, 164
Sse9I AATT 1 cut(s) 142
SspDI GGCGCC 1 cut(s) 38
TaqI TCGA 1 cut(s) 98
TasI AATT 1 cut(s) 142
TfiI GAWTC 1 cut(s) 88
TscAI CASTG 1 cut(s) 49
TspDTI ATGAA 1 cut(s) 17
TspGWI ACGGA 1 cut(s) 116
TspRI CASTG 1 cut(s) 49
XapI RAATTY 1 cut(s) 142
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.