Rh2DG207200

L-type lectin-domain containing receptor kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
Physical Location & Seq
Reverse (-)
19503114 .. 19513287
10174 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG207200.1

Sequence Viewer

Length: 1041 bp
ATGGTGGCTTCTCATGGCCTTCCTGCTATTACAGCTGCTGATTTCTTCTGTGGAGATGCTCCGGTAAGGGGACCCGGCTGGGGTGACTATACCGGTTTTTATCCCAAGCCGGAGGTCGATAATCAGGTGGAGTTGGTTCCGATCTGTATACTGGATTGGATGAGGCTTGTGGAGGAGGCTGGAGTTGTGCTTTGCGGTGATAACAAAGTCGTAAGTCGCTGGTGTCGAGATTGGGGCCCTGTGGCGGTGGAGACGGTGTTACAAATGCAATTGAGGGGTCTCTATGGCTCGAACCTGGTGTTAGCATGGCAAGTGCGAGCGCCTTCTTCAGACGGTTCGGGATTCATTGAACTCAATAGAGATGAAGCTTGTCTTGTTGGCTGGGCGAGATATGCAGAACCGTTGCACTTGTGGGAGGGGTCGACGTCACTTGCTGCAGACTTCACTACTGACTTCTCCTTCGTTGTGCACTTTCTTAACAGCAGCGAAATTGGTGATGGGCTTTCCTTCTTCCTCGCTCCGGTCCACTATACAATTCCACCCAACTCCCGCGGTCCTTTGATGGGTTTGTTCAACGCAACCACTCAGTTGGCAGTCTCCCAAAACCAGCTTGTGACGGTTGAGTTCGACACTACATCCAATCCCGTATGGGATCCACCGGTGACGCACATCGGGATCAACGACAGGAGCGTCAGGTCAGTTGTTAATGCCAGCTGGGATCCTCTCAGTGGGAAACCGTGTCATGCACGGATAACGTACAATGCTACCACCAACAACCTCACTGTGTTTTGGACATACGAAGAAAATTTCGAGGCAAATTCTTCCCTTTCCTATCATATTGACCTGAAAATGTCTCTCCCGGAGTGGGTTAGAATTGGATTTGCATCTTCTACAGGCCTTTTCCATGAGCGGCATGTTATAAGATCATGGGAATTCAGTAGTTCAGTAATAAAGTCCGATGCGAGCCGAAGGAGGATAGTCTTGAGGATTGGGGTCGCTGTAGCAGCAGTAGCTCTTTTCTTGATTTTGGTGCTTTATTGA

Protein Analysis

346

Amino Acids

38.34

Weight (kDa)

5.25

Isoelectric Point (pI)

43.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 110 - 322 1.9e-56 Legume lectin domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0021776)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 920
AasI GACNNNNNNGTC 1 cut(s) 689
AatII GACGTC 1 cut(s) 428
AccBSI CCGCTC 1 cut(s) 910
AccI GTMKAC 2 cut(s) 148, 422
AccII CGCG 1 cut(s) 552
AciI CCGC 5 cut(s) 195, 245, 550, 552, 910
AclWI GGATC 5 cut(s) 647, 660, 683, 713, 726
AcsI RAATTY 3 cut(s) 805, 817, 932
AcuI CTGAAG 1 cut(s) 312
AcyI GRCGYC 1 cut(s) 425
AfaI GTAC 1 cut(s) 758
AfiI CCNNNNNNNGG 7 cut(s) 68, 80, 244, 520, 563, 728, 865
AgeI ACCGGT 2 cut(s) 92, 658
AgsI TTSAA 2 cut(s) 350, 574
AjnI CCWGG 1 cut(s) 294
AluBI AGCT 5 cut(s) 35, 368, 610, 714, 1013
AluI AGCT 5 cut(s) 35, 368, 610, 714, 1013
Alw21I GWGCWC 1 cut(s) 471
Alw26I GTCTC 4 cut(s) 245, 284, 601, 858
Alw44I GTGCAC 1 cut(s) 467
AlwI GGATC 5 cut(s) 647, 660, 683, 713, 726
AlwNI CAGNNNCTG 1 cut(s) 38
AoxI GGCC 3 cut(s) 16, 235, 895
ApaI GGGCCC 1 cut(s) 239
ApaLI GTGCAC 1 cut(s) 467
ApeKI GCWGC 4 cut(s) 35, 434, 483, 1004
ApoI RAATTY 3 cut(s) 805, 817, 932
ArsI GACNNNNNNTTYG 2 cut(s) 443, 475
AsiGI ACCGGT 2 cut(s) 92, 658
AspLEI GCGC 1 cut(s) 322
AspS9I GGNCC 5 cut(s) 71, 235, 236, 523, 554
AsuC2I CCSGG 2 cut(s) 75, 860
AsuHPI GGTGA 4 cut(s) 95, 209, 506, 673
AvaII GGWCC 3 cut(s) 71, 523, 554
BaeGI GKGCMC 2 cut(s) 239, 471
BamHI GGATCC 2 cut(s) 652, 718
BanII GRGCYC 1 cut(s) 239
Bbv12I GWGCWC 1 cut(s) 471
BbvI GCAGC 4 cut(s) 22, 421, 495, 1016
BccI CCATC 2 cut(s) 491, 556
BciT130I CCWGG 1 cut(s) 296
BcnI CCSGG 2 cut(s) 75, 860
BcoDI GTCTC 4 cut(s) 245, 284, 601, 858
BfmI CTRYAG 3 cut(s) 435, 891, 999
BfoI RGCGCY 1 cut(s) 323
BisI GCNGC 5 cut(s) 36, 435, 484, 911, 1005
BlsI GCNGC 5 cut(s) 37, 436, 485, 912, 1006
Bme1390I CCNGG 3 cut(s) 75, 296, 860
Bme18I GGWCC 3 cut(s) 71, 523, 554
BmgT120I GGNCC 5 cut(s) 71, 235, 236, 523, 554
BmiI GGNNCC 7 cut(s) 72, 73, 138, 236, 237, 654, 720
BmrFI CCNGG 3 cut(s) 75, 296, 860
BmsI GCATC 3 cut(s) 46, 893, 949
BpmI CTGGAG 1 cut(s) 201
BpuEI CTTGAG 1 cut(s) 1003
BpuMI CCSGG 2 cut(s) 75, 860
BsaBI GATNNNNATC 1 cut(s) 883
BsaHI GRCGYC 1 cut(s) 425
BsaI GGTCTC 1 cut(s) 284
BsaJI CCNNGG 1 cut(s) 550
BsaWI WCCGGW 4 cut(s) 61, 92, 520, 658
BsaXI ACNNNNNCTCC 2 cut(s) 242, 272
Bsc4I CCNNNNNNNGG 7 cut(s) 68, 80, 244, 520, 563, 728, 865
Bse118I RCCGGY 2 cut(s) 92, 658
Bse1I ACTGG 1 cut(s) 156
Bse8I GATNNNNATC 1 cut(s) 883
BseBI CCWGG 1 cut(s) 296
BseDI CCNNGG 1 cut(s) 550
BseGI GGATG 2 cut(s) 165, 635
BseJI GATNNNNATC 1 cut(s) 883
BseLI CCNNNNNNNGG 7 cut(s) 68, 80, 244, 520, 563, 728, 865
BseMII CTCAG 2 cut(s) 599, 739
BseNI ACTGG 1 cut(s) 156
BseRI GAGGAG 1 cut(s) 188
BseSI GKGCMC 2 cut(s) 239, 471
BseXI GCAGC 4 cut(s) 22, 421, 495, 1016
BseYI CCCAGC 3 cut(s) 78, 381, 714
Bsh1236I CGCG 1 cut(s) 552
BshFI GGCC 3 cut(s) 18, 237, 897
BshTI ACCGGT 2 cut(s) 92, 658
BsiHKAI GWGCWC 1 cut(s) 471
BsiSI CCGG 7 cut(s) 62, 75, 93, 110, 521, 659, 860
BslFI GGGAC 1 cut(s) 84
BslI CCNNNNNNNGG 7 cut(s) 68, 80, 244, 520, 563, 728, 865
BsmAI GTCTC 4 cut(s) 245, 284, 601, 858
BsmBI CGTCTC 1 cut(s) 245
BsmFI GGGAC 1 cut(s) 84
BsnI GGCC 3 cut(s) 18, 237, 897
Bso31I GGTCTC 1 cut(s) 284
Bsp120I GGGCCC 1 cut(s) 235
Bsp1286I GDGCHC 2 cut(s) 239, 471
Bsp143I GATC 5 cut(s) 141, 652, 675, 718, 923
BspACI CCGC 5 cut(s) 195, 245, 550, 552, 910
BspANI GGCC 3 cut(s) 18, 237, 897
BspCNI CTCAG 2 cut(s) 598, 738
BspFNI CGCG 1 cut(s) 552
BspLI GGNNCC 7 cut(s) 72, 73, 138, 236, 237, 654, 720
BspMAI CTGCAG 1 cut(s) 439
BspPI GGATC 5 cut(s) 647, 660, 683, 713, 726
BspTNI GGTCTC 1 cut(s) 284
BsrBI CCGCTC 1 cut(s) 910
BsrFI RCCGGY 2 cut(s) 92, 658
BsrI ACTGG 1 cut(s) 156
BssAI RCCGGY 2 cut(s) 92, 658
BssECI CCNNGG 1 cut(s) 550
BssMI GATC 5 cut(s) 141, 652, 675, 718, 923
BssNAI GTATAC 1 cut(s) 149
BssNI GRCGYC 1 cut(s) 425
Bst1107I GTATAC 1 cut(s) 149
Bst2UI CCWGG 1 cut(s) 296
Bst4CI ACNGT 6 cut(s) 256, 335, 402, 619, 738, 784
BstACI GRCGYC 1 cut(s) 425
BstC8I GCNNGC 3 cut(s) 318, 712, 964
BstDEI CTNAG 2 cut(s) 585, 725
BstDSI CCRYGG 1 cut(s) 550
BstF5I GGATG 2 cut(s) 165, 635
BstFNI CGCG 1 cut(s) 552
BstH2I RGCGCY 1 cut(s) 323
BstHHI GCGC 1 cut(s) 322
BstKTI GATC 5 cut(s) 144, 655, 678, 721, 926
BstMAI GTCTC 4 cut(s) 245, 284, 601, 858
BstMBI GATC 5 cut(s) 141, 652, 675, 718, 923
BstMWI GCNNNNNNNGC 4 cut(s) 32, 392, 1004, 1010
BstNI CCWGG 1 cut(s) 296
BstNSI RCATGY 1 cut(s) 917
BstSCI CCNGG 3 cut(s) 73, 294, 858
BstSFI CTRYAG 3 cut(s) 435, 891, 999
BstSLI GKGCMC 2 cut(s) 239, 471
BstUI CGCG 1 cut(s) 552
BstV1I GCAGC 4 cut(s) 22, 421, 495, 1016
BstX2I RGATCY 2 cut(s) 652, 718
BstXI CCANNNNNNTGG 1 cut(s) 589
BstYI RGATCY 2 cut(s) 652, 718
BstZ17I GTATAC 1 cut(s) 149
BsuRI GGCC 3 cut(s) 18, 237, 897
BtgI CCRYGG 1 cut(s) 550
BtsCI GGATG 2 cut(s) 165, 635
BtsIMutI CAGTG 2 cut(s) 733, 780
Cac8I GCNNGC 3 cut(s) 318, 712, 964
CaiI CAGNNNCTG 1 cut(s) 38
CfoI GCGC 1 cut(s) 322
Cfr10I RCCGGY 2 cut(s) 92, 658
Cfr13I GGNCC 5 cut(s) 71, 235, 236, 523, 554
Cfr42I CCGCGG 1 cut(s) 553
CseI GACGC 2 cut(s) 673, 679
CsiI ACCWGGT 1 cut(s) 294
Csp6I GTAC 1 cut(s) 757
CspAI ACCGGT 2 cut(s) 92, 658
CviAII CATG 6 cut(s) 14, 306, 743, 905, 914, 927
CviQI GTAC 1 cut(s) 757
DdeI CTNAG 2 cut(s) 585, 725
DpnI GATC 5 cut(s) 143, 654, 677, 720, 925
DpnII GATC 5 cut(s) 141, 652, 675, 718, 923
DrdI GACNNNNNNGTC 1 cut(s) 689
DseDI GACNNNNNNGTC 1 cut(s) 689
Eco147I AGGCCT 1 cut(s) 897
Eco24I GRGCYC 1 cut(s) 239
Eco31I GGTCTC 1 cut(s) 284
Eco47I GGWCC 3 cut(s) 71, 523, 554
Eco57I CTGAAG 1 cut(s) 312
EcoO109I RGGNCCY 3 cut(s) 71, 235, 236
EcoRI GAATTC 1 cut(s) 932
EcoRII CCWGG 1 cut(s) 294
EcoT38I GRGCYC 1 cut(s) 239
Esp3I CGTCTC 1 cut(s) 245
FaeI CATG 6 cut(s) 17, 309, 746, 908, 917, 930
FalI AAGNNNNNCTT 2 cut(s) 357, 389
FaqI GGGAC 1 cut(s) 84
FatI CATG 6 cut(s) 13, 305, 742, 904, 913, 926
FauI CCCGC 1 cut(s) 557
FblI GTMKAC 2 cut(s) 148, 422
Fnu4HI GCNGC 5 cut(s) 36, 435, 484, 911, 1005
FokI GGATG 2 cut(s) 172, 622
FriOI GRGCYC 1 cut(s) 239
Fsp4HI GCNGC 5 cut(s) 36, 435, 484, 911, 1005
GlaI GCGC 1 cut(s) 321
GluI GCNGC 5 cut(s) 36, 435, 484, 911, 1005
GsaI CCCAGC 3 cut(s) 82, 385, 718
GsuI CTGGAG 1 cut(s) 201
HaeII RGCGCY 1 cut(s) 323
HaeIII GGCC 3 cut(s) 18, 237, 897
HapII CCGG 7 cut(s) 62, 75, 93, 110, 521, 659, 860
HgaI GACGC 2 cut(s) 673, 679
HhaI GCGC 1 cut(s) 322
Hin1I GRCGYC 1 cut(s) 425
Hin1II CATG 6 cut(s) 17, 309, 746, 908, 917, 930
Hin6I GCGC 1 cut(s) 320
HinP1I GCGC 1 cut(s) 320
HincII GTYRAC 1 cut(s) 423
HindII GTYRAC 1 cut(s) 423
HindIII AAGCTT 1 cut(s) 366
HinfI GANTC 1 cut(s) 342
HpaII CCGG 7 cut(s) 62, 75, 93, 110, 521, 659, 860
HphI GGTGA 4 cut(s) 95, 209, 506, 673
Hpy166II GTNNAC 4 cut(s) 149, 423, 469, 526
Hpy188I TCNGA 3 cut(s) 141, 331, 958
Hpy188III TCNNGA 5 cut(s) 227, 339, 673, 982, 1021
Hpy8I GTNNAC 4 cut(s) 149, 423, 469, 526
Hpy99I CGWCG 1 cut(s) 427
HpyAV CCTTC 5 cut(s) 29, 333, 469, 517, 963
HpyCH4III ACNGT 6 cut(s) 256, 335, 402, 619, 738, 784
HpyCH4IV ACGT 2 cut(s) 425, 755
HpyCH4V TGCA 7 cut(s) 268, 395, 406, 437, 469, 746, 884
HpyF10VI GCNNNNNNNGC 4 cut(s) 32, 392, 1004, 1010
HpyF3I CTNAG 2 cut(s) 585, 725
HpySE526I ACGT 2 cut(s) 425, 755
Hsp92I GRCGYC 1 cut(s) 425
Hsp92II CATG 6 cut(s) 17, 309, 746, 908, 917, 930
HspAI GCGC 1 cut(s) 320
KflI GGGWCCC 1 cut(s) 71
KspI CCGCGG 1 cut(s) 553
Kzo9I GATC 5 cut(s) 141, 652, 675, 718, 923
LmnI GCTCC 3 cut(s) 64, 523, 687
Lsp1109I GCAGC 4 cut(s) 22, 421, 495, 1016
LweI GCATC 3 cut(s) 46, 893, 949
MabI ACCWGGT 1 cut(s) 294
MaeII ACGT 2 cut(s) 425, 755
MaeIII GTNAC 5 cut(s) 83, 258, 426, 613, 661
MalI GATC 5 cut(s) 143, 654, 677, 720, 925
MbiI CCGCTC 1 cut(s) 910
MboI GATC 5 cut(s) 141, 652, 675, 718, 923
MboII GAAGA 6 cut(s) 37, 318, 502, 812, 813, 879
MfeI CAATTG 1 cut(s) 269
MflI RGATCY 2 cut(s) 652, 718
MhlI GDGCHC 2 cut(s) 239, 471
MluCI AATT 7 cut(s) 269, 489, 534, 805, 817, 873, 932
MseI TTAA 2 cut(s) 477, 705
MspA1I CMGCKG 3 cut(s) 35, 552, 714
MspI CCGG 7 cut(s) 62, 75, 93, 110, 521, 659, 860
MspR9I CCNGG 3 cut(s) 75, 296, 860
MunI CAATTG 1 cut(s) 269
MvaI CCWGG 1 cut(s) 296
MvnI CGCG 1 cut(s) 552
MwoI GCNNNNNNNGC 4 cut(s) 32, 392, 1004, 1010
NciI CCSGG 2 cut(s) 75, 860
NdeII GATC 5 cut(s) 141, 652, 675, 718, 923
NlaIII CATG 6 cut(s) 17, 309, 746, 908, 917, 930
NlaIV GGNNCC 7 cut(s) 72, 73, 138, 236, 237, 654, 720
NmuCI GTSAC 4 cut(s) 83, 426, 613, 661
NspI RCATGY 1 cut(s) 917
PceI AGGCCT 1 cut(s) 897
PcsI WCGNNNNNNNCGW 3 cut(s) 223, 678, 687
PfeI GAWTC 1 cut(s) 342
PfoI TCCNGGA 1 cut(s) 858
PinAI ACCGGT 2 cut(s) 92, 658
PkrI GCNGC 5 cut(s) 37, 436, 485, 912, 1006
PpuMI RGGWCCY 1 cut(s) 71
PsiI TTATAA 1 cut(s) 920
Psp5II RGGWCCY 1 cut(s) 71
Psp6I CCWGG 1 cut(s) 294
PspFI CCCAGC 3 cut(s) 78, 381, 714
PspGI CCWGG 1 cut(s) 294
PspN4I GGNNCC 7 cut(s) 72, 73, 138, 236, 237, 654, 720
PspOMI GGGCCC 1 cut(s) 235
PspPI GGNCC 5 cut(s) 71, 235, 236, 523, 554
PspPPI RGGWCCY 1 cut(s) 71
PstI CTGCAG 1 cut(s) 439
PstNI CAGNNNCTG 1 cut(s) 38
PsuI RGATCY 2 cut(s) 652, 718
PvuII CAGCTG 2 cut(s) 35, 714
RsaI GTAC 1 cut(s) 758
RsaNI GTAC 1 cut(s) 757
SacII CCGCGG 1 cut(s) 553
SalI GTCGAC 1 cut(s) 421
SaqAI TTAA 2 cut(s) 477, 705
SatI GCNGC 5 cut(s) 36, 435, 484, 911, 1005
Sau3AI GATC 5 cut(s) 141, 652, 675, 718, 923
Sau96I GGNCC 5 cut(s) 71, 235, 236, 523, 554
ScrFI CCNGG 3 cut(s) 75, 296, 860
SduI GDGCHC 2 cut(s) 239, 471
SexAI ACCWGGT 1 cut(s) 294
SfaNI GCATC 3 cut(s) 46, 893, 949
SfcI CTRYAG 3 cut(s) 435, 891, 999
Sfr303I CCGCGG 1 cut(s) 553
SgrAI CRCCGGYG 1 cut(s) 658
SgrBI CCGCGG 1 cut(s) 553
SinI GGWCC 3 cut(s) 71, 523, 554
SmlI CTYRAG 1 cut(s) 982
SmoI CTYRAG 1 cut(s) 982
Sse9I AATT 7 cut(s) 269, 489, 534, 805, 817, 873, 932
SseBI AGGCCT 1 cut(s) 897
SsiI CCGC 5 cut(s) 195, 245, 550, 552, 910
StuI AGGCCT 1 cut(s) 897
StyD4I CCNGG 3 cut(s) 73, 294, 858
TaaI ACNGT 6 cut(s) 256, 335, 402, 619, 738, 784
TaiI ACGT 2 cut(s) 428, 758
TaqI TCGA 6 cut(s) 117, 226, 290, 422, 627, 810
TasI AATT 7 cut(s) 269, 489, 534, 805, 817, 873, 932
TauI GCSGC 1 cut(s) 913
TfiI GAWTC 1 cut(s) 342
Tru1I TTAA 2 cut(s) 477, 705
Tru9I TTAA 2 cut(s) 477, 705
TscAI CASTG 2 cut(s) 733, 787
TseFI GTSAC 4 cut(s) 83, 426, 613, 661
TseI GCWGC 4 cut(s) 35, 434, 483, 1004
Tsp45I GTSAC 4 cut(s) 83, 426, 613, 661
TspDTI ATGAA 2 cut(s) 334, 378
TspGWI ACGGA 1 cut(s) 763
TspRI CASTG 2 cut(s) 733, 787
VneI GTGCAC 1 cut(s) 467
VpaK11BI GGWCC 3 cut(s) 71, 523, 554
XapI RAATTY 3 cut(s) 805, 817, 932
XceI RCATGY 1 cut(s) 917
XmiI GTMKAC 2 cut(s) 148, 422
ZraI GACGTC 1 cut(s) 426
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.