Rh3AG286600

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3A
Physical Location & Seq
Reverse (-)
33959584 .. 33972104
12521 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3AG286600.1

Sequence Viewer

Length: 216 bp
ATGGCTGGTTCTCGAAAGAAGCCTGATGGACTCTATACTTATGGAGTTATGGGTAAGATTGGTATGTCTATGTCACTGAAAATGATTTTTGCACTTGAAAAGTCTATCAATGAACTTACAGACATGGAAGAGCCCATTGGCCGTGTCTTGCAGAAAACAAAGGTCGCTACGATGCTCCCACTACATACAGCAAGCAATTTCACAATAAGAATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

71

Amino Acids

7.89

Weight (kDa)

9.7

Isoelectric Point (pI)

33.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 1 cut(s) 139
AcsI RAATTY 1 cut(s) 210
AgsI TTSAA 1 cut(s) 98
AjuI GAANNNNNNNTTGG 2 cut(s) 120, 152
AoxI GGCC 1 cut(s) 139
ApoI RAATTY 1 cut(s) 210
BanII GRGCYC 1 cut(s) 135
BccI CCATC 1 cut(s) 20
BceAI ACGGC 1 cut(s) 126
BmsI GCATC 1 cut(s) 162
BshFI GGCC 1 cut(s) 141
BsnI GGCC 1 cut(s) 141
Bsp1286I GDGCHC 1 cut(s) 135
BspANI GGCC 1 cut(s) 141
BspQI GCTCTTC 1 cut(s) 123
Bst6I CTCTTC 1 cut(s) 123
BstC8I GCNNGC 1 cut(s) 193
BsuRI GGCC 1 cut(s) 141
BtsIMutI CAGTG 1 cut(s) 74
Cac8I GCNNGC 1 cut(s) 193
CviAII CATG 1 cut(s) 124
CviJI RGCY 4 cut(s) 5, 22, 133, 141
CviKI_1 RGCY 4 cut(s) 5, 22, 133, 141
EaeI YGGCCR 1 cut(s) 139
Eam1104I CTCTTC 1 cut(s) 123
EarI CTCTTC 1 cut(s) 123
Eco24I GRGCYC 1 cut(s) 135
EcoT38I GRGCYC 1 cut(s) 135
FaeI CATG 1 cut(s) 127
FaiI YATR 7 cut(s) 36, 42, 50, 65, 71, 125, 186
FatI CATG 1 cut(s) 123
FriOI GRGCYC 1 cut(s) 135
HaeIII GGCC 1 cut(s) 141
Hin1II CATG 1 cut(s) 127
HinfI GANTC 1 cut(s) 30
Hpy188III TCNNGA 1 cut(s) 12
HpyCH4V TGCA 2 cut(s) 92, 151
Hsp92II CATG 1 cut(s) 127
LguI GCTCTTC 1 cut(s) 123
LmnI GCTCC 1 cut(s) 180
LpnPI CCDG 1 cut(s) 36
LweI GCATC 1 cut(s) 162
MaeIII GTNAC 1 cut(s) 72
MboII GAAGA 1 cut(s) 140
MhlI GDGCHC 1 cut(s) 135
MluCI AATT 2 cut(s) 196, 210
MlyI GAGTC 1 cut(s) 24
NlaIII CATG 1 cut(s) 127
NmuCI GTSAC 1 cut(s) 72
PciSI GCTCTTC 1 cut(s) 123
PleI GAGTC 1 cut(s) 24
PpsI GAGTC 1 cut(s) 24
SapI GCTCTTC 1 cut(s) 123
SchI GAGTC 1 cut(s) 24
SduI GDGCHC 1 cut(s) 135
SetI ASST 1 cut(s) 165
SfaNI GCATC 1 cut(s) 162
SgeI CNNG 8 cut(s) 18, 24, 35, 107, 136, 155, 160, 204
Sse9I AATT 2 cut(s) 196, 210
TaqI TCGA 1 cut(s) 13
TasI AATT 2 cut(s) 196, 210
TscAI CASTG 1 cut(s) 81
TseFI GTSAC 1 cut(s) 72
Tsp45I GTSAC 1 cut(s) 72
TspDTI ATGAA 1 cut(s) 126
TspRI CASTG 1 cut(s) 81
XapI RAATTY 1 cut(s) 210
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.