Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4A

Orthogroup ID

OG0016121

Physical Location & Seq

Genomic Coordinates Reverse (-)

45236671 .. 45239046

Gene Structure 2376 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4AG181200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1023 bp

ATGTCGGTGCTCGTCACCGGCGCCGCCGGGTTCATCGGGTCCCACTGCTCCCTCGCGCTCAAGAAGCGCGGCGACGGCGTCCTGGGGCTCGACAACTTCAACTCCTACTACGACCCGTCGCTGAAGCGGGCCAGGCAGGCGATGCTGAAGAAGCACGAGATTTTCATCGTCGAGGCCGACCTGAACGACGGCCCGATGCTGACGAAGCTCTTCGACGTCGTTCCGTTCACCCACGTGCTCCACTTGGCGGCGCAGGCGGGTGTACGCTACGCCATGCAGAACCCTCAGTCCTACGTGGCGTCCAACATTGCCGGGTTCGTCAATCTCCTCGAAATTTCCAAAGCTGCTAATCCTCAGCCGTCGATTGTCTGGGCCTCCTCCAGCTCCGTCTACGGCCTCAACACCGAGAACCCATTTTCCGAGCTCCACAGAACAGACCAGCCCGCCAGTCTCTACGCCGCCACTAAAAAAGCCGGCGAAGAAATCGCCCACACTTACAACCATATTTACGGCCTCTCCCTCACCGGGCTGAGATTCTTCACCGTCTACGGGCCCTGGGGCAGACCCGACATGGCCTACTTCTTCTTCACCAAGGACATACTCCAAGGCAAGACCATCGACGTATACAAAACCGTCGACGACAAAGAGGTGGCGCGTGACTTCACCTACATTGACGACATAGTCAAGGGCTGCCTCGGCGCCCTCGACACCGCAGGGAAGAGCACCGGCAGCGGCGGAAAAAAGAAAGGCCCCGCCCAGCTGAGAATCTACAACCTGGGGAACACGTCGCCGGTCCCCGTCGGCAGACTGGTGTCGATACTGGAAGGGCTGTTGAGTACCAAAGCGAAGAAACACGTGATCAAGATGCCGAGAAACGGTGACGTGCCGTACACGCATGCGAATGTGAGCTTGGCGCTGCACGACTTCGGGTACAAGCCGACGACGGACCTGGCCTCCGGGCTGAGGAAGTTCGTAAAGTGGTACGTGAGTTATTACGGGATCGAGTCGAGGTATATTGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0005975 GO:0005996 GO:0006063 GO:0006082 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009058 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009987 GO:0012505 GO:0016051 GO:0016053 GO:0019586 GO:0019752 GO:0031410 GO:0031982 GO:0031984 GO:0032787 GO:0033481 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0046364 GO:0046394 GO:0050829 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0071704 GO:0072330 GO:0097708 GO:0098542 GO:0098791 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00520 ko01100 map00520 map01100

Pfam Domains

Protein Families

Epimerase GDP_Man_Dehyd

Protein Analysis

340

Amino Acids

37.32

Weight (kDa)

9.25

Isoelectric Point (pI)

32.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RmlD_sub_bind	PF04321	1 - 185	6.1e-11	RmlD substrate binding domain
Epimerase	PF01370	3 - 237	8.2e-48	NAD dependent epimerase/dehydratase family
Polysacc_synt_2	PF02719	3 - 123	3.7e-07	Polysaccharide biosynthesis protein
GDP_Man_Dehyd	PF16363	4 - 323	6.2e-44	GDP-mannose 4,6 dehydratase
3Beta_HSD	PF01073	4 - 229	4.9e-12	3-beta hydroxysteroid dehydrogenase/isomerase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016121)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G23820
fragaria_vesca	FvH4_4g13320
malus_domestica	MD05G1230600.v1.1
prunus_persica	Prupe.1G164800_v2.0.a1
pyrus_communis	pycom04g01330
rosa_chinensis	RchiOBHm_Chr4g0413621
rosa_laevigata	RLG00000008205
rosa_multiflora	Rmu_sc0008583.1_g000001 Rmu_sc0026643.1_g000001
rosa_rugosa	Rorug04G0121700
rosa_samantha	Rh4AG181200 Rh4BG180400 Rh4CG192400 Rh4DG176600
rosa_wichuraiana	Rw4G015150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	680
AatII	GACGTC	1 cut(s)	219
AccB1I	GGYRCC	2 cut(s)	20, 698
AccI	GTMKAC	4 cut(s)	390, 546, 624, 636
AccII	CGCG	3 cut(s)	56, 69, 655
AclWI	GGATC	1 cut(s)	1007
AcsI	RAATTY	1 cut(s)	333
AcuI	CTGAAG	2 cut(s)	143, 167
AcvI	CACGTG	2 cut(s)	235, 856
AcyI	GRCGYC	5 cut(s)	21, 78, 216, 299, 699
AfaI	GTAC	5 cut(s)	264, 838, 890, 932, 983
AfiI	CCNNNNNNNGG	5 cut(s)	247, 525, 549, 875, 963
AflIII	ACRYGT	2 cut(s)	783, 853
AgsI	TTSAA	1 cut(s)	100
AjiI	CACGTC	2 cut(s)	786, 883
AjnI	CCWGG	5 cut(s)	81, 131, 554, 774, 948
AjuI	GAANNNNNNNTTGG	2 cut(s)	893, 925
AleI	CACNNNNGTG	1 cut(s)	233
AloI	GAACNNNNNNTCC	4 cut(s)	272, 304, 401, 433
AluBI	AGCT	6 cut(s)	208, 344, 384, 424, 760, 909
AluI	AGCT	6 cut(s)	208, 344, 384, 424, 760, 909
Alw21I	GWGCWC	4 cut(s)	12, 240, 426, 725
Alw26I	GTCTC	1 cut(s)	455
AlwI	GGATC	1 cut(s)	1007
ApaI	GGGCCC	1 cut(s)	555
ApeKI	GCWGC	4 cut(s)	344, 690, 729, 916
ApoI	RAATTY	1 cut(s)	333
Asp700I	GAANNNNTTC	1 cut(s)	209
AspLEI	GCGC	7 cut(s)	23, 58, 69, 253, 655, 701, 916
AspS9I	GGNCC	9 cut(s)	39, 129, 191, 372, 551, 552, 749, 793, 946
AsuC2I	CCSGG	4 cut(s)	28, 313, 526, 958
AsuHPI	GGTGA	7 cut(s)	7, 220, 514, 532, 580, 655, 890
AvaII	GGWCC	3 cut(s)	39, 793, 946
BaeGI	GKGCMC	1 cut(s)	555
BaeI	ACNNNNGTAYC	2 cut(s)	973, 1006
BanI	GGYRCC	2 cut(s)	20, 698
BanII	GRGCYC	3 cut(s)	90, 426, 555
BauI	CACGAG	1 cut(s)	155
BbrPI	CACGTG	2 cut(s)	235, 856
Bbv12I	GWGCWC	4 cut(s)	12, 240, 426, 725
BbvCI	CCTCAGC	2 cut(s)	354, 962
BbvI	GCAGC	4 cut(s)	331, 677, 741, 903
BccI	CCATC	1 cut(s)	623
BceAI	ACGGC	6 cut(s)	91, 205, 343, 409, 526, 871
BcgI	CGANNNNNNTGC	2 cut(s)	598, 632
BciT130I	CCWGG	5 cut(s)	83, 133, 556, 776, 950
BclI	TGATCA	1 cut(s)	858
BcnI	CCSGG	4 cut(s)	28, 313, 526, 958
BcoDI	GTCTC	1 cut(s)	455
BfoI	RGCGCY	3 cut(s)	24, 702, 917
BglI	GCCNNNNNGGC	1 cut(s)	137
BisI	GCNGC	9 cut(s)	24, 70, 249, 345, 459, 691, 730, 733, 917
BlsI	GCNGC	9 cut(s)	25, 71, 250, 346, 460, 692, 731, 734, 918
Bme1390I	CCNGG	9 cut(s)	28, 83, 133, 313, 526, 556, 776, 950, 958
Bme18I	GGWCC	3 cut(s)	39, 793, 946
BmgBI	CACGTC	2 cut(s)	786, 883
BmgT120I	GGNCC	9 cut(s)	39, 129, 191, 372, 551, 552, 749, 793, 946
BmiI	GGNNCC	7 cut(s)	22, 40, 41, 553, 700, 751, 795
BmrFI	CCNGG	9 cut(s)	28, 83, 133, 313, 526, 556, 776, 950, 958
BmsI	GCATC	3 cut(s)	132, 186, 855
BoxI	GACNNNNGTC	1 cut(s)	811
BpmI	CTGGAG	1 cut(s)	364
Bpu10I	CCTNAGC	2 cut(s)	354, 962
BpuEI	CTTGAG	1 cut(s)	44
BpuMI	CCSGG	4 cut(s)	28, 313, 526, 958
BsaAI	YACGTR	4 cut(s)	235, 295, 856, 985
BsaBI	GATNNNNATC	1 cut(s)	164
BsaHI	GRCGYC	5 cut(s)	21, 78, 216, 299, 699
BsaJI	CCNNGG	7 cut(s)	82, 554, 555, 591, 604, 694, 775
BsaXI	ACNNNNNCTCC	6 cut(s)	86, 116, 500, 530, 938, 968
Bsc4I	CCNNNNNNNGG	5 cut(s)	247, 525, 549, 875, 963
Bse118I	RCCGGY	4 cut(s)	17, 473, 725, 790
Bse1I	ACTGG	3 cut(s)	447, 813, 825
Bse3DI	GCAATG	1 cut(s)	306
Bse8I	GATNNNNATC	1 cut(s)	164
BseBI	CCWGG	5 cut(s)	83, 133, 556, 776, 950
BseDI	CCNNGG	7 cut(s)	82, 554, 555, 591, 604, 694, 775
BseJI	GATNNNNATC	1 cut(s)	164
BseLI	CCNNNNNNNGG	5 cut(s)	247, 525, 549, 875, 963
BseMI	GCAATG	1 cut(s)	306
BseMII	CTCAG	5 cut(s)	299, 368, 521, 752, 953
BseNI	ACTGG	3 cut(s)	447, 813, 825
BseRI	GAGGAG	2 cut(s)	317, 367
BseSI	GKGCMC	1 cut(s)	555
BseXI	GCAGC	4 cut(s)	331, 677, 741, 903
BseYI	CCCAGC	1 cut(s)	756
BsgI	GTGCAG	1 cut(s)	902
Bsh1236I	CGCG	3 cut(s)	56, 69, 655
BshNI	GGYRCC	2 cut(s)	20, 698
BsiHKAI	GWGCWC	4 cut(s)	12, 240, 426, 725
BsiSI	CCGG	8 cut(s)	18, 27, 312, 474, 525, 726, 791, 957
BslFI	GGGAC	2 cut(s)	25, 779
BslI	CCNNNNNNNGG	5 cut(s)	247, 525, 549, 875, 963
BsmAI	GTCTC	1 cut(s)	455
BsmFI	GGGAC	2 cut(s)	25, 779
Bsp120I	GGGCCC	1 cut(s)	551
Bsp1286I	GDGCHC	6 cut(s)	12, 90, 240, 426, 555, 725
Bsp143I	GATC	2 cut(s)	858, 999
BspCNI	CTCAG	5 cut(s)	298, 367, 522, 753, 954
BspFNI	CGCG	3 cut(s)	56, 69, 655
BspLI	GGNNCC	7 cut(s)	22, 40, 41, 553, 700, 751, 795
BspPI	GGATC	1 cut(s)	1007
BspQI	GCTCTTC	2 cut(s)	215, 713
BspT107I	GGYRCC	2 cut(s)	20, 698
BsrDI	GCAATG	1 cut(s)	306
BsrFI	RCCGGY	4 cut(s)	17, 473, 725, 790
BsrI	ACTGG	3 cut(s)	447, 813, 825
BssAI	RCCGGY	4 cut(s)	17, 473, 725, 790
BssECI	CCNNGG	7 cut(s)	82, 554, 555, 591, 604, 694, 775
BssMI	GATC	2 cut(s)	858, 999
BssNAI	GTATAC	1 cut(s)	625
BssNI	GRCGYC	5 cut(s)	21, 78, 216, 299, 699
BssSI	CACGAG	1 cut(s)	155
BssT1I	CCWWGG	2 cut(s)	591, 604
Bst1107I	GTATAC	1 cut(s)	625
Bst2BI	CACGAG	1 cut(s)	155
Bst2UI	CCWGG	5 cut(s)	83, 133, 556, 776, 950
Bst4CI	ACNGT	3 cut(s)	544, 634, 878
Bst6I	CTCTTC	2 cut(s)	215, 713
BstACI	GRCGYC	5 cut(s)	21, 78, 216, 299, 699
BstAPI	GCANNNNNTGC	1 cut(s)	142
BstBAI	YACGTR	4 cut(s)	235, 295, 856, 985
BstC8I	GCNNGC	6 cut(s)	129, 138, 255, 444, 475, 897
BstDEI	CTNAG	5 cut(s)	285, 354, 530, 761, 962
BstFNI	CGCG	3 cut(s)	56, 69, 655
BstH2I	RGCGCY	3 cut(s)	24, 702, 917
BstHHI	GCGC	7 cut(s)	23, 58, 69, 253, 655, 701, 916
BstKTI	GATC	2 cut(s)	861, 1002
BstMAI	GTCTC	1 cut(s)	455
BstMBI	GATC	2 cut(s)	858, 999
BstNI	CCWGG	5 cut(s)	83, 133, 556, 776, 950
BstNSI	RCATGY	1 cut(s)	899
BstPAI	GACNNNNGTC	1 cut(s)	811
BstSCI	CCNGG	9 cut(s)	26, 81, 131, 311, 524, 554, 774, 948, 956
BstSLI	GKGCMC	1 cut(s)	555
BstUI	CGCG	3 cut(s)	56, 69, 655
BstV1I	GCAGC	4 cut(s)	331, 677, 741, 903
BstZ17I	GTATAC	1 cut(s)	625
BtgZI	GCGATG	1 cut(s)	155
BtrI	CACGTC	2 cut(s)	786, 883
BtsI	GCAGTG	1 cut(s)	43
BtsIMutI	CAGTG	1 cut(s)	43
Cac8I	GCNNGC	6 cut(s)	129, 138, 255, 444, 475, 897
CfoI	GCGC	7 cut(s)	23, 58, 69, 253, 655, 701, 916
Cfr10I	RCCGGY	4 cut(s)	17, 473, 725, 790
Cfr13I	GGNCC	9 cut(s)	39, 129, 191, 372, 551, 552, 749, 793, 946
CseI	GACGC	2 cut(s)	67, 288
Csp6I	GTAC	5 cut(s)	263, 837, 889, 931, 982
CviAII	CATG	3 cut(s)	274, 571, 896
CviQI	GTAC	5 cut(s)	263, 837, 889, 931, 982
DdeI	CTNAG	5 cut(s)	285, 354, 530, 761, 962
DinI	GGCGCC	2 cut(s)	22, 700
DpnI	GATC	2 cut(s)	860, 1001
DpnII	GATC	2 cut(s)	858, 999
DrdI	GACNNNNNNGTC	1 cut(s)	680
DseDI	GACNNNNNNGTC	1 cut(s)	680
Eam1104I	CTCTTC	2 cut(s)	215, 713
EarI	CTCTTC	2 cut(s)	215, 713
EciI	GGCGGA	1 cut(s)	750
Ecl136II	GAGCTC	1 cut(s)	424
Eco130I	CCWWGG	2 cut(s)	591, 604
Eco24I	GRGCYC	3 cut(s)	90, 426, 555
Eco47I	GGWCC	3 cut(s)	39, 793, 946
Eco53kI	GAGCTC	1 cut(s)	424
Eco57I	CTGAAG	2 cut(s)	143, 167
Eco72I	CACGTG	2 cut(s)	235, 856
EcoICRI	GAGCTC	1 cut(s)	424
EcoO109I	RGGNCCY	3 cut(s)	39, 552, 749
EcoRII	CCWGG	5 cut(s)	81, 131, 554, 774, 948
EcoT14I	CCWWGG	2 cut(s)	591, 604
EcoT38I	GRGCYC	3 cut(s)	90, 426, 555
EgeI	GGCGCC	2 cut(s)	22, 700
EheI	GGCGCC	2 cut(s)	22, 700
ErhI	CCWWGG	2 cut(s)	591, 604
FaeI	CATG	3 cut(s)	277, 574, 899
FaiI	YATR	9 cut(s)	275, 504, 572, 599, 625, 680, 897, 1014, 1021
FaqI	GGGAC	2 cut(s)	25, 779
FatI	CATG	3 cut(s)	273, 570, 895
FauI	CCCGC	4 cut(s)	120, 250, 451, 760
FbaI	TGATCA	1 cut(s)	858
FblI	GTMKAC	4 cut(s)	390, 546, 624, 636
Fnu4HI	GCNGC	9 cut(s)	24, 70, 249, 345, 459, 691, 730, 733, 917
FriOI	GRGCYC	3 cut(s)	90, 426, 555
Fsp4HI	GCNGC	9 cut(s)	24, 70, 249, 345, 459, 691, 730, 733, 917
GlaI	GCGC	7 cut(s)	22, 57, 68, 252, 654, 700, 915
GluI	GCNGC	9 cut(s)	24, 70, 249, 345, 459, 691, 730, 733, 917
GsaI	CCCAGC	1 cut(s)	760
GsuI	CTGGAG	1 cut(s)	364
HaeII	RGCGCY	3 cut(s)	24, 702, 917
HapII	CCGG	8 cut(s)	18, 27, 312, 474, 525, 726, 791, 957
HgaI	GACGC	2 cut(s)	67, 288
HhaI	GCGC	7 cut(s)	23, 58, 69, 253, 655, 701, 916
Hin1I	GRCGYC	5 cut(s)	21, 78, 216, 299, 699
Hin1II	CATG	3 cut(s)	277, 574, 899
Hin6I	GCGC	7 cut(s)	21, 56, 67, 251, 653, 699, 914
HinP1I	GCGC	7 cut(s)	21, 56, 67, 251, 653, 699, 914
HincII	GTYRAC	1 cut(s)	637
HindII	GTYRAC	1 cut(s)	637
HinfI	GANTC	3 cut(s)	534, 765, 1004
HpaII	CCGG	8 cut(s)	18, 27, 312, 474, 525, 726, 791, 957
HphI	GGTGA	7 cut(s)	7, 220, 514, 532, 580, 655, 890
Hpy166II	GTNNAC	7 cut(s)	228, 263, 391, 547, 625, 637, 891
Hpy188I	TCNGA	1 cut(s)	421
Hpy188III	TCNNGA	2 cut(s)	61, 862
Hpy8I	GTNNAC	7 cut(s)	228, 263, 391, 547, 625, 637, 891
HpyAV	CCTTC	1 cut(s)	818
HpyCH4III	ACNGT	3 cut(s)	544, 634, 878
HpyCH4IV	ACGT	8 cut(s)	216, 234, 294, 621, 785, 855, 882, 984
HpyCH4V	TGCA	3 cut(s)	277, 919, 1019
HpyF3I	CTNAG	5 cut(s)	285, 354, 530, 761, 962
HpySE526I	ACGT	8 cut(s)	216, 234, 294, 621, 785, 855, 882, 984
Hsp92I	GRCGYC	5 cut(s)	21, 78, 216, 299, 699
Hsp92II	CATG	3 cut(s)	277, 574, 899
HspAI	GCGC	7 cut(s)	21, 56, 67, 251, 653, 699, 914
KasI	GGCGCC	2 cut(s)	20, 698
KflI	GGGWCCC	1 cut(s)	39
KroI	GCCGGC	1 cut(s)	473
KroNI	GCCGGC	1 cut(s)	475
Ksp22I	TGATCA	1 cut(s)	858
Kzo9I	GATC	2 cut(s)	858, 999
LguI	GCTCTTC	2 cut(s)	215, 713
LmnI	GCTCC	4 cut(s)	53, 243, 389, 429
Lsp1109I	GCAGC	4 cut(s)	331, 677, 741, 903
LweI	GCATC	3 cut(s)	132, 186, 855
MaeII	ACGT	8 cut(s)	216, 234, 294, 621, 785, 855, 882, 984
MaeIII	GTNAC	3 cut(s)	13, 656, 878
MalI	GATC	2 cut(s)	860, 1001
MboI	GATC	2 cut(s)	858, 999
MboII	GAAGA	8 cut(s)	160, 202, 491, 529, 574, 577, 730, 859
MhlI	GDGCHC	6 cut(s)	12, 90, 240, 426, 555, 725
MluCI	AATT	1 cut(s)	333
Mly113I	GGCGCC	2 cut(s)	21, 699
MlyI	GAGTC	1 cut(s)	1013
MmeI	TCCRAC	1 cut(s)	327
MroNI	GCCGGC	1 cut(s)	473
MroXI	GAANNNNTTC	1 cut(s)	209
MslI	CAYNNNNRTG	2 cut(s)	233, 900
MspA1I	CMGCKG	2 cut(s)	732, 760
MspI	CCGG	8 cut(s)	18, 27, 312, 474, 525, 726, 791, 957
MspR9I	CCNGG	9 cut(s)	28, 83, 133, 313, 526, 556, 776, 950, 958
MvaI	CCWGG	5 cut(s)	83, 133, 556, 776, 950
MvnI	CGCG	3 cut(s)	56, 69, 655
NaeI	GCCGGC	1 cut(s)	475
NarI	GGCGCC	2 cut(s)	21, 699
NciI	CCSGG	4 cut(s)	28, 313, 526, 958
NdeII	GATC	2 cut(s)	858, 999
NgoMIV	GCCGGC	1 cut(s)	473
NlaIII	CATG	3 cut(s)	277, 574, 899
NlaIV	GGNNCC	7 cut(s)	22, 40, 41, 553, 700, 751, 795
NmeAIII	GCCGAG	2 cut(s)	675, 894
NmuCI	GTSAC	3 cut(s)	13, 656, 878
NspI	RCATGY	1 cut(s)	899
OliI	CACNNNNGTG	1 cut(s)	233
PaeI	GCATGC	1 cut(s)	899
PasI	CCCWGGG	1 cut(s)	555
PciSI	GCTCTTC	2 cut(s)	215, 713
PcsI	WCGNNNNNNNCGW	2 cut(s)	174, 702
PdiI	GCCGGC	1 cut(s)	475
PdmI	GAANNNNTTC	1 cut(s)	209
PfeI	GAWTC	2 cut(s)	534, 765
PflFI	GACNNNGTC	2 cut(s)	77, 680
PkrI	GCNGC	9 cut(s)	25, 71, 250, 346, 460, 692, 731, 734, 918
PleI	GAGTC	1 cut(s)	1012
PluTI	GGCGCC	2 cut(s)	24, 702
PmaCI	CACGTG	2 cut(s)	235, 856
PmlI	CACGTG	2 cut(s)	235, 856
PpsI	GAGTC	1 cut(s)	1012
Ppu21I	YACGTR	4 cut(s)	235, 295, 856, 985
PpuMI	RGGWCCY	1 cut(s)	39
PshAI	GACNNNNGTC	1 cut(s)	811
Psp124BI	GAGCTC	1 cut(s)	426
Psp5II	RGGWCCY	1 cut(s)	39
Psp6I	CCWGG	5 cut(s)	81, 131, 554, 774, 948
PspCI	CACGTG	2 cut(s)	235, 856
PspFI	CCCAGC	1 cut(s)	756
PspGI	CCWGG	5 cut(s)	81, 131, 554, 774, 948
PspN4I	GGNNCC	7 cut(s)	22, 40, 41, 553, 700, 751, 795
PspOMI	GGGCCC	1 cut(s)	551
PspPI	GGNCC	9 cut(s)	39, 129, 191, 372, 551, 552, 749, 793, 946
PspPPI	RGGWCCY	1 cut(s)	39
PsyI	GACNNNGTC	2 cut(s)	77, 680
PvuII	CAGCTG	1 cut(s)	760
RsaI	GTAC	5 cut(s)	264, 838, 890, 932, 983
RsaNI	GTAC	5 cut(s)	263, 837, 889, 931, 982
RseI	CAYNNNNRTG	2 cut(s)	233, 900
SacI	GAGCTC	1 cut(s)	426
SalI	GTCGAC	1 cut(s)	635
SapI	GCTCTTC	2 cut(s)	215, 713
SatI	GCNGC	9 cut(s)	24, 70, 249, 345, 459, 691, 730, 733, 917
Sau3AI	GATC	2 cut(s)	858, 999
Sau96I	GGNCC	9 cut(s)	39, 129, 191, 372, 551, 552, 749, 793, 946
SchI	GAGTC	1 cut(s)	1013
ScrFI	CCNGG	9 cut(s)	28, 83, 133, 313, 526, 556, 776, 950, 958
SduI	GDGCHC	6 cut(s)	12, 90, 240, 426, 555, 725
SfaNI	GCATC	3 cut(s)	132, 186, 855
SfoI	GGCGCC	2 cut(s)	22, 700
SgrAI	CRCCGGYG	1 cut(s)	17
SgrDI	CGTCGACG	1 cut(s)	635
SinI	GGWCC	3 cut(s)	39, 793, 946
SmiMI	CAYNNNNRTG	2 cut(s)	233, 900
SmlI	CTYRAG	1 cut(s)	59
SmoI	CTYRAG	1 cut(s)	59
SphI	GCATGC	1 cut(s)	899
Sse9I	AATT	1 cut(s)	333
SspDI	GGCGCC	2 cut(s)	20, 698
SstI	GAGCTC	1 cut(s)	426
StyD4I	CCNGG	9 cut(s)	26, 81, 131, 311, 524, 554, 774, 948, 956
StyI	CCWWGG	2 cut(s)	591, 604
TaaI	ACNGT	3 cut(s)	544, 634, 878
TaiI	ACGT	8 cut(s)	219, 237, 297, 624, 788, 858, 885, 987
TasI	AATT	1 cut(s)	333
TauI	GCSGC	5 cut(s)	26, 72, 251, 461, 735
TfiI	GAWTC	2 cut(s)	534, 765
TscAI	CASTG	1 cut(s)	50
TseFI	GTSAC	3 cut(s)	13, 656, 878
TseI	GCWGC	4 cut(s)	344, 690, 729, 916
Tsp45I	GTSAC	3 cut(s)	13, 656, 878
TspDTI	ATGAA	2 cut(s)	22, 154
TspGWI	ACGGA	3 cut(s)	213, 376, 959
TspRI	CASTG	1 cut(s)	50
Tth111I	GACNNNGTC	2 cut(s)	77, 680
VpaK11BI	GGWCC	3 cut(s)	39, 793, 946
XapI	RAATTY	1 cut(s)	333
XceI	RCATGY	1 cut(s)	899
XmiI	GTMKAC	4 cut(s)	390, 546, 624, 636
XmnI	GAANNNNTTC	1 cut(s)	209
ZraI	GACGTC	1 cut(s)	217

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.