WPP domain-interacting tail-anchored protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr6g0299871 |
| rosa_roxburghii | Rroxscaffold_1G00012470 |
| rosa_samantha | Rh4AG246800 Rh4BG252200 Rh6CG485200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 77 |
| AclWI | GGATC | 2 cut(s) | 281, 507 |
| AcsI | RAATTY | 1 cut(s) | 295 |
| AcuI | CTGAAG | 1 cut(s) | 59 |
| AfaI | GTAC | 2 cut(s) | 139, 320 |
| AgsI | TTSAA | 1 cut(s) | 216 |
| AluBI | AGCT | 2 cut(s) | 161, 407 |
| AluI | AGCT | 2 cut(s) | 161, 407 |
| AlwI | GGATC | 2 cut(s) | 281, 507 |
| ApeKI | GCWGC | 1 cut(s) | 243 |
| ApoI | RAATTY | 1 cut(s) | 295 |
| AspLEI | GCGC | 1 cut(s) | 78 |
| AsuHPI | GGTGA | 1 cut(s) | 110 |
| BbsI | GAAGAC | 1 cut(s) | 108 |
| BbvI | GCAGC | 1 cut(s) | 255 |
| BccI | CCATC | 3 cut(s) | 70, 307, 469 |
| BfaI | CTAG | 2 cut(s) | 374, 438 |
| BglII | AGATCT | 1 cut(s) | 370 |
| BisI | GCNGC | 1 cut(s) | 244 |
| BlsI | GCNGC | 1 cut(s) | 245 |
| BmiI | GGNNCC | 1 cut(s) | 336 |
| BmsI | GCATC | 1 cut(s) | 401 |
| BpiI | GAAGAC | 1 cut(s) | 108 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 319, 351 |
| Bpu10I | CCTNAGC | 1 cut(s) | 469 |
| BpuEI | CTTGAG | 1 cut(s) | 437 |
| BsaBI | GATNNNNATC | 1 cut(s) | 375 |
| Bse1I | ACTGG | 1 cut(s) | 139 |
| Bse3DI | GCAATG | 1 cut(s) | 85 |
| Bse8I | GATNNNNATC | 1 cut(s) | 375 |
| BseGI | GGATG | 3 cut(s) | 392, 429, 480 |
| BseJI | GATNNNNATC | 1 cut(s) | 375 |
| BseMI | GCAATG | 1 cut(s) | 85 |
| BseMII | CTCAG | 2 cut(s) | 282, 483 |
| BseNI | ACTGG | 1 cut(s) | 139 |
| BseRI | GAGGAG | 3 cut(s) | 287, 317, 320 |
| BseXI | GCAGC | 1 cut(s) | 255 |
| BseYI | CCCAGC | 1 cut(s) | 457 |
| BsiWI | CGTACG | 1 cut(s) | 318 |
| Bsp143I | GATC | 4 cut(s) | 286, 370, 376, 499 |
| BspCNI | CTCAG | 2 cut(s) | 283, 482 |
| BspHI | TCATGA | 1 cut(s) | 163 |
| BspLI | GGNNCC | 1 cut(s) | 336 |
| BspPI | GGATC | 2 cut(s) | 281, 507 |
| BsrDI | GCAATG | 1 cut(s) | 85 |
| BsrI | ACTGG | 1 cut(s) | 139 |
| BssMI | GATC | 4 cut(s) | 286, 370, 376, 499 |
| BstDEI | CTNAG | 2 cut(s) | 291, 469 |
| BstF5I | GGATG | 3 cut(s) | 392, 429, 480 |
| BstHHI | GCGC | 1 cut(s) | 78 |
| BstKTI | GATC | 4 cut(s) | 289, 373, 379, 502 |
| BstMBI | GATC | 4 cut(s) | 286, 370, 376, 499 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 118 |
| BstV1I | GCAGC | 1 cut(s) | 255 |
| BstV2I | GAAGAC | 1 cut(s) | 108 |
| BstX2I | RGATCY | 1 cut(s) | 370 |
| BstYI | RGATCY | 1 cut(s) | 370 |
| BtsCI | GGATG | 3 cut(s) | 392, 429, 480 |
| CciI | TCATGA | 1 cut(s) | 163 |
| CfoI | GCGC | 1 cut(s) | 78 |
| Csp6I | GTAC | 2 cut(s) | 138, 319 |
| CviAII | CATG | 2 cut(s) | 109, 164 |
| CviQI | GTAC | 2 cut(s) | 138, 319 |
| DdeI | CTNAG | 2 cut(s) | 291, 469 |
| DpnI | GATC | 4 cut(s) | 288, 372, 378, 501 |
| DpnII | GATC | 4 cut(s) | 286, 370, 376, 499 |
| Eco57I | CTGAAG | 1 cut(s) | 59 |
| FaeI | CATG | 2 cut(s) | 112, 167 |
| FaiI | YATR | 9 cut(s) | 26, 68, 74, 110, 165, 192, 237, 412, 454 |
| FatI | CATG | 2 cut(s) | 108, 163 |
| Fnu4HI | GCNGC | 1 cut(s) | 244 |
| FokI | GGATG | 3 cut(s) | 379, 436, 487 |
| Fsp4HI | GCNGC | 1 cut(s) | 244 |
| FspBI | CTAG | 2 cut(s) | 374, 438 |
| FspI | TGCGCA | 1 cut(s) | 77 |
| GlaI | GCGC | 1 cut(s) | 77 |
| GluI | GCNGC | 1 cut(s) | 244 |
| GsaI | CCCAGC | 1 cut(s) | 461 |
| HhaI | GCGC | 1 cut(s) | 78 |
| Hin1II | CATG | 2 cut(s) | 112, 167 |
| Hin6I | GCGC | 1 cut(s) | 76 |
| HinP1I | GCGC | 1 cut(s) | 76 |
| HinfI | GANTC | 2 cut(s) | 34, 175 |
| HphI | GGTGA | 1 cut(s) | 110 |
| Hpy188I | TCNGA | 4 cut(s) | 33, 39, 174, 370 |
| Hpy188III | TCNNGA | 3 cut(s) | 164, 290, 374 |
| HpyAV | CCTTC | 2 cut(s) | 248, 427 |
| HpyCH4IV | ACGT | 1 cut(s) | 321 |
| HpyCH4V | TGCA | 1 cut(s) | 46 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 118 |
| HpyF3I | CTNAG | 2 cut(s) | 291, 469 |
| HpySE526I | ACGT | 1 cut(s) | 321 |
| Hsp92II | CATG | 2 cut(s) | 112, 167 |
| HspAI | GCGC | 1 cut(s) | 76 |
| Kzo9I | GATC | 4 cut(s) | 286, 370, 376, 499 |
| LmnI | GCTCC | 1 cut(s) | 340 |
| LpnPI | CCDG | 4 cut(s) | 120, 303, 443, 456 |
| Lsp1109I | GCAGC | 1 cut(s) | 255 |
| LweI | GCATC | 1 cut(s) | 401 |
| MaeI | CTAG | 2 cut(s) | 374, 438 |
| MaeII | ACGT | 1 cut(s) | 321 |
| MalI | GATC | 4 cut(s) | 288, 372, 378, 501 |
| MboI | GATC | 4 cut(s) | 286, 370, 376, 499 |
| MboII | GAAGA | 1 cut(s) | 113 |
| MflI | RGATCY | 1 cut(s) | 370 |
| MluCI | AATT | 2 cut(s) | 198, 295 |
| MlyI | GAGTC | 1 cut(s) | 169 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 118 |
| NdeII | GATC | 4 cut(s) | 286, 370, 376, 499 |
| NlaIII | CATG | 2 cut(s) | 112, 167 |
| NlaIV | GGNNCC | 1 cut(s) | 336 |
| NsbI | TGCGCA | 1 cut(s) | 77 |
| PagI | TCATGA | 1 cut(s) | 163 |
| PfeI | GAWTC | 1 cut(s) | 34 |
| Pfl23II | CGTACG | 1 cut(s) | 318 |
| PkrI | GCNGC | 1 cut(s) | 245 |
| PleI | GAGTC | 1 cut(s) | 169 |
| PpsI | GAGTC | 1 cut(s) | 169 |
| PspFI | CCCAGC | 1 cut(s) | 457 |
| PspLI | CGTACG | 1 cut(s) | 318 |
| PspN4I | GGNNCC | 1 cut(s) | 336 |
| PsuI | RGATCY | 1 cut(s) | 370 |
| RsaI | GTAC | 2 cut(s) | 139, 320 |
| RsaNI | GTAC | 2 cut(s) | 138, 319 |
| SatI | GCNGC | 1 cut(s) | 244 |
| Sau3AI | GATC | 4 cut(s) | 286, 370, 376, 499 |
| SchI | GAGTC | 1 cut(s) | 169 |
| SetI | ASST | 5 cut(s) | 163, 259, 324, 351, 409 |
| SfaNI | GCATC | 1 cut(s) | 401 |
| SmlI | CTYRAG | 1 cut(s) | 416 |
| SmoI | CTYRAG | 1 cut(s) | 416 |
| Sse9I | AATT | 2 cut(s) | 198, 295 |
| SspMI | CTAG | 2 cut(s) | 374, 438 |
| TaiI | ACGT | 1 cut(s) | 324 |
| TaqI | TCGA | 2 cut(s) | 356, 379 |
| TasI | AATT | 2 cut(s) | 198, 295 |
| TfiI | GAWTC | 1 cut(s) | 34 |
| TseI | GCWGC | 1 cut(s) | 243 |
| TspDTI | ATGAA | 3 cut(s) | 65, 97, 440 |
| TspGWI | ACGGA | 1 cut(s) | 416 |
| XapI | RAATTY | 1 cut(s) | 295 |
| XbaI | TCTAGA | 1 cut(s) | 373 |
| XspI | CTAG | 2 cut(s) | 374, 438 |