CAS1 domain-containing protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g20470 |
| pyrus_communis | pycom10g22210 |
| rosa_samantha | Rh4CG283000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 3 cut(s) | 51, 106, 329 |
| AfaI | GTAC | 2 cut(s) | 98, 370 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 65, 126 |
| AgsI | TTSAA | 3 cut(s) | 152, 299, 382 |
| AluBI | AGCT | 3 cut(s) | 71, 188, 233 |
| AluI | AGCT | 3 cut(s) | 71, 188, 233 |
| Alw26I | GTCTC | 2 cut(s) | 40, 215 |
| ApoI | RAATTY | 3 cut(s) | 51, 106, 329 |
| AsuHPI | GGTGA | 3 cut(s) | 16, 151, 409 |
| BccI | CCATC | 1 cut(s) | 271 |
| BcoDI | GTCTC | 2 cut(s) | 40, 215 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 195, 227 |
| BsaI | GGTCTC | 2 cut(s) | 40, 215 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 65, 126 |
| BseGI | GGATG | 2 cut(s) | 169, 286 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 65, 126 |
| BseMII | CTCAG | 2 cut(s) | 75, 126 |
| BseRI | GAGGAG | 1 cut(s) | 219 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 65, 126 |
| BsmAI | GTCTC | 2 cut(s) | 40, 215 |
| Bso31I | GGTCTC | 2 cut(s) | 40, 215 |
| Bsp143I | GATC | 2 cut(s) | 6, 364 |
| BspCNI | CTCAG | 2 cut(s) | 76, 127 |
| BspTNI | GGTCTC | 2 cut(s) | 40, 215 |
| BssMI | GATC | 2 cut(s) | 6, 364 |
| Bst4CI | ACNGT | 1 cut(s) | 25 |
| BstDEI | CTNAG | 5 cut(s) | 84, 125, 135, 314, 343 |
| BstF5I | GGATG | 2 cut(s) | 169, 286 |
| BstKTI | GATC | 2 cut(s) | 9, 367 |
| BstMAI | GTCTC | 2 cut(s) | 40, 215 |
| BstMBI | GATC | 2 cut(s) | 6, 364 |
| BtsCI | GGATG | 2 cut(s) | 169, 286 |
| CseI | GACGC | 1 cut(s) | 319 |
| Csp6I | GTAC | 2 cut(s) | 97, 369 |
| CviAII | CATG | 1 cut(s) | 271 |
| CviJI | RGCY | 5 cut(s) | 15, 71, 188, 233, 245 |
| CviKI_1 | RGCY | 5 cut(s) | 15, 71, 188, 233, 245 |
| CviQI | GTAC | 2 cut(s) | 97, 369 |
| DdeI | CTNAG | 5 cut(s) | 84, 125, 135, 314, 343 |
| DpnI | GATC | 2 cut(s) | 8, 366 |
| DpnII | GATC | 2 cut(s) | 6, 364 |
| Eco31I | GGTCTC | 2 cut(s) | 40, 215 |
| EcoRI | GAATTC | 1 cut(s) | 106 |
| FaeI | CATG | 1 cut(s) | 274 |
| FaiI | YATR | 2 cut(s) | 272, 349 |
| FatI | CATG | 1 cut(s) | 270 |
| FokI | GGATG | 2 cut(s) | 176, 293 |
| HgaI | GACGC | 1 cut(s) | 319 |
| Hin1II | CATG | 1 cut(s) | 274 |
| HincII | GTYRAC | 1 cut(s) | 309 |
| HindII | GTYRAC | 1 cut(s) | 309 |
| HphI | GGTGA | 3 cut(s) | 16, 151, 409 |
| Hpy166II | GTNNAC | 1 cut(s) | 309 |
| Hpy188I | TCNGA | 3 cut(s) | 85, 136, 328 |
| Hpy8I | GTNNAC | 1 cut(s) | 309 |
| HpyAV | CCTTC | 1 cut(s) | 154 |
| HpyCH4III | ACNGT | 1 cut(s) | 25 |
| HpyF3I | CTNAG | 5 cut(s) | 84, 125, 135, 314, 343 |
| Hsp92II | CATG | 1 cut(s) | 274 |
| Kzo9I | GATC | 2 cut(s) | 6, 364 |
| LmnI | GCTCC | 1 cut(s) | 68 |
| LpnPI | CCDG | 4 cut(s) | 17, 30, 250, 371 |
| MaeIII | GTNAC | 2 cut(s) | 19, 397 |
| MalI | GATC | 2 cut(s) | 8, 366 |
| MboI | GATC | 2 cut(s) | 6, 364 |
| MboII | GAAGA | 2 cut(s) | 115, 370 |
| MluCI | AATT | 4 cut(s) | 51, 106, 329, 408 |
| MmeI | TCCRAC | 1 cut(s) | 177 |
| MnlI | CCTC | 8 cut(s) | 130, 169, 193, 197, 200, 232, 262, 277 |
| MseI | TTAA | 2 cut(s) | 171, 412 |
| MslI | CAYNNNNRTG | 1 cut(s) | 275 |
| NdeII | GATC | 2 cut(s) | 6, 364 |
| NlaIII | CATG | 1 cut(s) | 274 |
| NmuCI | GTSAC | 1 cut(s) | 397 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 229, 261 |
| RsaI | GTAC | 2 cut(s) | 98, 370 |
| RsaNI | GTAC | 2 cut(s) | 97, 369 |
| RseI | CAYNNNNRTG | 1 cut(s) | 275 |
| SaqAI | TTAA | 2 cut(s) | 171, 412 |
| Sau3AI | GATC | 2 cut(s) | 6, 364 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 275 |
| Sse9I | AATT | 4 cut(s) | 51, 106, 329, 408 |
| TaaI | ACNGT | 1 cut(s) | 25 |
| TaqI | TCGA | 1 cut(s) | 235 |
| TaqII | GACCGA | 1 cut(s) | 17 |
| TasI | AATT | 4 cut(s) | 51, 106, 329, 408 |
| TatI | WGTACW | 1 cut(s) | 96 |
| Tru1I | TTAA | 2 cut(s) | 171, 412 |
| Tru9I | TTAA | 2 cut(s) | 171, 412 |
| TseFI | GTSAC | 1 cut(s) | 397 |
| Tsp45I | GTSAC | 1 cut(s) | 397 |
| TspDTI | ATGAA | 1 cut(s) | 259 |
| XapI | RAATTY | 3 cut(s) | 51, 106, 329 |