ribosomal small subunit assembly
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G61111 |
| fragaria_vesca | FvH4_1g27030 |
| pyrus_communis | pycom16g10850 |
| rosa_samantha | Rh4AG290200 Rh4BG295900 Rh4CG305600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 180 |
| AciI | CCGC | 1 cut(s) | 145 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 180 |
| AjnI | CCWGG | 1 cut(s) | 189 |
| AluBI | AGCT | 2 cut(s) | 41, 67 |
| AluI | AGCT | 2 cut(s) | 41, 67 |
| Alw21I | GWGCWC | 1 cut(s) | 9 |
| Ama87I | CYCGRG | 1 cut(s) | 47 |
| AsuHPI | GGTGA | 1 cut(s) | 23 |
| AvaI | CYCGRG | 1 cut(s) | 47 |
| BauI | CACGAG | 1 cut(s) | 77 |
| Bbv12I | GWGCWC | 1 cut(s) | 9 |
| BciT130I | CCWGG | 1 cut(s) | 191 |
| Bme1390I | CCNGG | 1 cut(s) | 191 |
| BmeT110I | CYCGRG | 1 cut(s) | 47 |
| BmrFI | CCNGG | 1 cut(s) | 191 |
| BpuEI | CTTGAG | 1 cut(s) | 53 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 180 |
| Bse1I | ACTGG | 1 cut(s) | 182 |
| BseBI | CCWGG | 1 cut(s) | 191 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 180 |
| BseNI | ACTGG | 1 cut(s) | 182 |
| BsgI | GTGCAG | 1 cut(s) | 101 |
| BsiHKAI | GWGCWC | 1 cut(s) | 9 |
| BsiHKCI | CYCGRG | 1 cut(s) | 47 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 180 |
| BsoBI | CYCGRG | 1 cut(s) | 47 |
| Bsp1286I | GDGCHC | 1 cut(s) | 9 |
| BspACI | CCGC | 1 cut(s) | 145 |
| BspHI | TCATGA | 1 cut(s) | 102 |
| BsrI | ACTGG | 1 cut(s) | 182 |
| BssSI | CACGAG | 1 cut(s) | 77 |
| Bst2BI | CACGAG | 1 cut(s) | 77 |
| Bst2UI | CCWGG | 1 cut(s) | 191 |
| Bst4CI | ACNGT | 3 cut(s) | 113, 134, 161 |
| Bst6I | CTCTTC | 1 cut(s) | 47 |
| BstC8I | GCNNGC | 2 cut(s) | 171, 187 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 73, 151, 191 |
| BstNI | CCWGG | 1 cut(s) | 191 |
| BstSCI | CCNGG | 1 cut(s) | 189 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 177 |
| BtsIMutI | CAGTG | 2 cut(s) | 109, 196 |
| Cac8I | GCNNGC | 2 cut(s) | 171, 187 |
| CciI | TCATGA | 1 cut(s) | 102 |
| CviAII | CATG | 1 cut(s) | 103 |
| CviJI | RGCY | 6 cut(s) | 41, 67, 76, 121, 173, 194 |
| CviKI_1 | RGCY | 6 cut(s) | 41, 67, 76, 121, 173, 194 |
| Eam1104I | CTCTTC | 1 cut(s) | 47 |
| EarI | CTCTTC | 1 cut(s) | 47 |
| Eco88I | CYCGRG | 1 cut(s) | 47 |
| EcoRII | CCWGG | 1 cut(s) | 189 |
| FaeI | CATG | 1 cut(s) | 106 |
| FaiI | YATR | 1 cut(s) | 104 |
| FatI | CATG | 1 cut(s) | 102 |
| Hin1II | CATG | 1 cut(s) | 106 |
| HphI | GGTGA | 1 cut(s) | 23 |
| Hpy188III | TCNNGA | 4 cut(s) | 10, 49, 70, 103 |
| HpyCH4III | ACNGT | 3 cut(s) | 113, 134, 161 |
| HpyCH4V | TGCA | 1 cut(s) | 82 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 73, 151, 191 |
| Hsp92II | CATG | 1 cut(s) | 106 |
| LmnI | GCTCC | 1 cut(s) | 12 |
| LpnPI | CCDG | 6 cut(s) | 23, 51, 163, 168, 176, 183 |
| MboII | GAAGA | 2 cut(s) | 64, 91 |
| MhlI | GDGCHC | 1 cut(s) | 9 |
| MluCI | AATT | 1 cut(s) | 91 |
| MnlI | CCTC | 3 cut(s) | 48, 56, 66 |
| MspA1I | CMGCKG | 1 cut(s) | 41 |
| MspR9I | CCNGG | 1 cut(s) | 191 |
| MvaI | CCWGG | 1 cut(s) | 191 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 73, 151, 191 |
| NlaIII | CATG | 1 cut(s) | 106 |
| PaeR7I | CTCGAG | 1 cut(s) | 47 |
| PagI | TCATGA | 1 cut(s) | 102 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 180 |
| Psp6I | CCWGG | 1 cut(s) | 189 |
| PspGI | CCWGG | 1 cut(s) | 189 |
| PvuII | CAGCTG | 1 cut(s) | 41 |
| ScrFI | CCNGG | 1 cut(s) | 191 |
| SduI | GDGCHC | 1 cut(s) | 9 |
| SetI | ASST | 3 cut(s) | 43, 48, 69 |
| Sfr274I | CTCGAG | 1 cut(s) | 47 |
| SlaI | CTCGAG | 1 cut(s) | 47 |
| SmlI | CTYRAG | 2 cut(s) | 47, 68 |
| SmoI | CTYRAG | 2 cut(s) | 47, 68 |
| Sse9I | AATT | 1 cut(s) | 91 |
| SsiI | CCGC | 1 cut(s) | 145 |
| StyD4I | CCNGG | 1 cut(s) | 189 |
| TaaI | ACNGT | 3 cut(s) | 113, 134, 161 |
| TaqI | TCGA | 1 cut(s) | 48 |
| TasI | AATT | 1 cut(s) | 91 |
| TscAI | CASTG | 1 cut(s) | 116 |
| TspDTI | ATGAA | 3 cut(s) | 84, 91, 119 |
| TspRI | CASTG | 1 cut(s) | 116 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 180 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 177 |
| XhoI | CTCGAG | 1 cut(s) | 47 |