CLAVATA3 ESR (CLE)-related protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G68795 |
| fragaria_vesca | FvH4_4g28190 |
| prunus_persica | Prupe.1G304500_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr4g0435951 |
| rosa_rugosa | Rorug04G0290800 |
| rosa_samantha | Rh4CG368500 |
| rosa_wichuraiana | Rw4G030170 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 3 cut(s) | 67, 231, 258 |
| AclWI | GGATC | 1 cut(s) | 134 |
| AfaI | GTAC | 1 cut(s) | 48 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 149 |
| AluBI | AGCT | 2 cut(s) | 110, 179 |
| AluI | AGCT | 2 cut(s) | 110, 179 |
| Alw21I | GWGCWC | 1 cut(s) | 210 |
| AlwI | GGATC | 1 cut(s) | 134 |
| Ama87I | CYCGRG | 1 cut(s) | 279 |
| ApeKI | GCWGC | 1 cut(s) | 107 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 79 |
| AsuHPI | GGTGA | 2 cut(s) | 28, 75 |
| AvaI | CYCGRG | 1 cut(s) | 279 |
| BbsI | GAAGAC | 1 cut(s) | 82 |
| Bbv12I | GWGCWC | 1 cut(s) | 210 |
| BbvI | GCAGC | 1 cut(s) | 119 |
| BceAI | ACGGC | 1 cut(s) | 39 |
| BfmI | CTRYAG | 1 cut(s) | 105 |
| BisI | GCNGC | 1 cut(s) | 108 |
| BlsI | GCNGC | 1 cut(s) | 109 |
| BmeT110I | CYCGRG | 1 cut(s) | 279 |
| BmiI | GGNNCC | 1 cut(s) | 102 |
| BpiI | GAAGAC | 1 cut(s) | 82 |
| BpmI | CTGGAG | 1 cut(s) | 194 |
| Bsa29I | ATCGAT | 1 cut(s) | 138 |
| BsaJI | CCNNGG | 1 cut(s) | 129 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 149 |
| BseCI | ATCGAT | 1 cut(s) | 138 |
| BseDI | CCNNGG | 1 cut(s) | 129 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 149 |
| BseXI | GCAGC | 1 cut(s) | 119 |
| BshVI | ATCGAT | 1 cut(s) | 138 |
| BsiHKAI | GWGCWC | 1 cut(s) | 210 |
| BsiHKCI | CYCGRG | 1 cut(s) | 279 |
| BslFI | GGGAC | 1 cut(s) | 155 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 149 |
| BsmFI | GGGAC | 1 cut(s) | 155 |
| BsoBI | CYCGRG | 1 cut(s) | 279 |
| Bsp1286I | GDGCHC | 1 cut(s) | 210 |
| Bsp143I | GATC | 3 cut(s) | 88, 135, 139 |
| BspACI | CCGC | 3 cut(s) | 67, 231, 258 |
| BspDI | ATCGAT | 1 cut(s) | 138 |
| BspLI | GGNNCC | 1 cut(s) | 102 |
| BspMAI | CTGCAG | 1 cut(s) | 109 |
| BspPI | GGATC | 1 cut(s) | 134 |
| BssECI | CCNNGG | 1 cut(s) | 129 |
| BssMI | GATC | 3 cut(s) | 88, 135, 139 |
| BssT1I | CCWWGG | 1 cut(s) | 129 |
| Bst4CI | ACNGT | 1 cut(s) | 152 |
| BstC8I | GCNNGC | 2 cut(s) | 22, 105 |
| BstKTI | GATC | 3 cut(s) | 91, 138, 142 |
| BstMBI | GATC | 3 cut(s) | 88, 135, 139 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 266 |
| BstSFI | CTRYAG | 1 cut(s) | 105 |
| BstV1I | GCAGC | 1 cut(s) | 119 |
| BstV2I | GAAGAC | 1 cut(s) | 82 |
| Bsu15I | ATCGAT | 1 cut(s) | 138 |
| BsuTUI | ATCGAT | 1 cut(s) | 138 |
| BtgZI | GCGATG | 1 cut(s) | 35 |
| Cac8I | GCNNGC | 2 cut(s) | 22, 105 |
| ClaI | ATCGAT | 1 cut(s) | 138 |
| Csp6I | GTAC | 1 cut(s) | 47 |
| CviJI | RGCY | 4 cut(s) | 103, 110, 179, 214 |
| CviKI_1 | RGCY | 4 cut(s) | 103, 110, 179, 214 |
| CviQI | GTAC | 1 cut(s) | 47 |
| DpnI | GATC | 3 cut(s) | 90, 137, 141 |
| DpnII | GATC | 3 cut(s) | 88, 135, 139 |
| Eco130I | CCWWGG | 1 cut(s) | 129 |
| Eco88I | CYCGRG | 1 cut(s) | 279 |
| EcoT14I | CCWWGG | 1 cut(s) | 129 |
| ErhI | CCWWGG | 1 cut(s) | 129 |
| FaiI | YATR | 2 cut(s) | 200, 272 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 64, 96 |
| FaqI | GGGAC | 1 cut(s) | 155 |
| Fnu4HI | GCNGC | 1 cut(s) | 108 |
| Fsp4HI | GCNGC | 1 cut(s) | 108 |
| GluI | GCNGC | 1 cut(s) | 108 |
| GsuI | CTGGAG | 1 cut(s) | 194 |
| HinfI | GANTC | 2 cut(s) | 168, 282 |
| HphI | GGTGA | 2 cut(s) | 28, 75 |
| Hpy188I | TCNGA | 1 cut(s) | 118 |
| Hpy99I | CGWCG | 1 cut(s) | 168 |
| HpyAV | CCTTC | 1 cut(s) | 90 |
| HpyCH4III | ACNGT | 1 cut(s) | 152 |
| HpyCH4IV | ACGT | 1 cut(s) | 145 |
| HpyCH4V | TGCA | 1 cut(s) | 107 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 266 |
| HpySE526I | ACGT | 1 cut(s) | 145 |
| Kzo9I | GATC | 3 cut(s) | 88, 135, 139 |
| LmnI | GCTCC | 2 cut(s) | 100, 213 |
| LpnPI | CCDG | 3 cut(s) | 117, 224, 239 |
| Lsp1109I | GCAGC | 1 cut(s) | 119 |
| MaeII | ACGT | 1 cut(s) | 145 |
| MaeIII | GTNAC | 1 cut(s) | 146 |
| MalI | GATC | 3 cut(s) | 90, 137, 141 |
| MboI | GATC | 3 cut(s) | 88, 135, 139 |
| MboII | GAAGA | 1 cut(s) | 87 |
| MhlI | GDGCHC | 1 cut(s) | 210 |
| MluCI | AATT | 1 cut(s) | 112 |
| MlyI | GAGTC | 2 cut(s) | 177, 291 |
| MnlI | CCTC | 2 cut(s) | 225, 262 |
| MroXI | GAANNNNTTC | 1 cut(s) | 79 |
| MslI | CAYNNNNRTG | 1 cut(s) | 203 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 266 |
| NdeII | GATC | 3 cut(s) | 88, 135, 139 |
| NlaIV | GGNNCC | 1 cut(s) | 102 |
| PaeR7I | CTCGAG | 1 cut(s) | 279 |
| PdmI | GAANNNNTTC | 1 cut(s) | 79 |
| PkrI | GCNGC | 1 cut(s) | 109 |
| PleI | GAGTC | 2 cut(s) | 176, 290 |
| PpsI | GAGTC | 2 cut(s) | 176, 290 |
| PspN4I | GGNNCC | 1 cut(s) | 102 |
| PspXI | VCTCGAGB | 1 cut(s) | 279 |
| PstI | CTGCAG | 1 cut(s) | 109 |
| RsaI | GTAC | 1 cut(s) | 48 |
| RsaNI | GTAC | 1 cut(s) | 47 |
| RseI | CAYNNNNRTG | 1 cut(s) | 203 |
| SatI | GCNGC | 1 cut(s) | 108 |
| Sau3AI | GATC | 3 cut(s) | 88, 135, 139 |
| SchI | GAGTC | 2 cut(s) | 177, 291 |
| SduI | GDGCHC | 1 cut(s) | 210 |
| SetI | ASST | 4 cut(s) | 82, 112, 148, 181 |
| SfcI | CTRYAG | 1 cut(s) | 105 |
| Sfr274I | CTCGAG | 1 cut(s) | 279 |
| SlaI | CTCGAG | 1 cut(s) | 279 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 203 |
| SmlI | CTYRAG | 1 cut(s) | 279 |
| SmoI | CTYRAG | 1 cut(s) | 279 |
| Sse9I | AATT | 1 cut(s) | 112 |
| SsiI | CCGC | 3 cut(s) | 67, 231, 258 |
| StyI | CCWWGG | 1 cut(s) | 129 |
| TaaI | ACNGT | 1 cut(s) | 152 |
| TaiI | ACGT | 1 cut(s) | 148 |
| TaqI | TCGA | 4 cut(s) | 138, 156, 217, 280 |
| TasI | AATT | 1 cut(s) | 112 |
| TseI | GCWGC | 1 cut(s) | 107 |
| TspGWI | ACGGA | 1 cut(s) | 113 |
| XhoI | CTCGAG | 1 cut(s) | 279 |
| XmnI | GAANNNNTTC | 1 cut(s) | 79 |