No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000005916 |
| rosa_multiflora | Rmu_sc0001118.1_g000020 |
| rosa_samantha | Rh4CG430300 Rh4DG411400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 2 cut(s) | 134, 314 |
| AfaI | GTAC | 1 cut(s) | 193 |
| AflII | CTTAAG | 1 cut(s) | 173 |
| AgsI | TTSAA | 1 cut(s) | 274 |
| AluBI | AGCT | 3 cut(s) | 164, 178, 327 |
| AluI | AGCT | 3 cut(s) | 164, 178, 327 |
| ApoI | RAATTY | 2 cut(s) | 134, 314 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 45 |
| AspS9I | GGNCC | 2 cut(s) | 62, 361 |
| AvaII | GGWCC | 2 cut(s) | 62, 361 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 175, 208 |
| BccI | CCATC | 1 cut(s) | 371 |
| BfaI | CTAG | 1 cut(s) | 161 |
| BfrI | CTTAAG | 1 cut(s) | 173 |
| Bme18I | GGWCC | 2 cut(s) | 62, 361 |
| BmgT120I | GGNCC | 2 cut(s) | 62, 361 |
| BmiI | GGNNCC | 2 cut(s) | 42, 64 |
| BmsI | GCATC | 1 cut(s) | 211 |
| BsaJI | CCNNGG | 1 cut(s) | 50 |
| BsaWI | WCCGGW | 1 cut(s) | 181 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 46, 76 |
| Bse1I | ACTGG | 1 cut(s) | 364 |
| Bse3DI | GCAATG | 1 cut(s) | 160 |
| BseDI | CCNNGG | 1 cut(s) | 50 |
| BseGI | GGATG | 3 cut(s) | 226, 351, 382 |
| BseMI | GCAATG | 1 cut(s) | 160 |
| BseNI | ACTGG | 1 cut(s) | 364 |
| BsiSI | CCGG | 1 cut(s) | 182 |
| BslFI | GGGAC | 1 cut(s) | 48 |
| BsmFI | GGGAC | 1 cut(s) | 48 |
| Bsp143I | GATC | 1 cut(s) | 117 |
| BspLI | GGNNCC | 2 cut(s) | 42, 64 |
| BspTI | CTTAAG | 1 cut(s) | 173 |
| BsrDI | GCAATG | 1 cut(s) | 160 |
| BsrI | ACTGG | 1 cut(s) | 364 |
| BssECI | CCNNGG | 1 cut(s) | 50 |
| BssMI | GATC | 1 cut(s) | 117 |
| Bst4CI | ACNGT | 2 cut(s) | 22, 297 |
| Bst6I | CTCTTC | 1 cut(s) | 51 |
| BstAFI | CTTAAG | 1 cut(s) | 173 |
| BstC8I | GCNNGC | 1 cut(s) | 226 |
| BstDEI | CTNAG | 1 cut(s) | 319 |
| BstF5I | GGATG | 3 cut(s) | 226, 351, 382 |
| BstKTI | GATC | 1 cut(s) | 120 |
| BstMBI | GATC | 1 cut(s) | 117 |
| BstNSI | RCATGY | 1 cut(s) | 228 |
| BtsCI | GGATG | 3 cut(s) | 226, 351, 382 |
| BtsI | GCAGTG | 1 cut(s) | 120 |
| BtsIMutI | CAGTG | 1 cut(s) | 120 |
| Cac8I | GCNNGC | 1 cut(s) | 226 |
| Cfr13I | GGNCC | 2 cut(s) | 62, 361 |
| Csp6I | GTAC | 1 cut(s) | 192 |
| CviAII | CATG | 3 cut(s) | 225, 246, 358 |
| CviJI | RGCY | 4 cut(s) | 164, 178, 327, 385 |
| CviKI_1 | RGCY | 4 cut(s) | 164, 178, 327, 385 |
| CviQI | GTAC | 1 cut(s) | 192 |
| DdeI | CTNAG | 1 cut(s) | 319 |
| DpnI | GATC | 1 cut(s) | 119 |
| DpnII | GATC | 1 cut(s) | 117 |
| Eam1104I | CTCTTC | 1 cut(s) | 51 |
| EarI | CTCTTC | 1 cut(s) | 51 |
| Eco47I | GGWCC | 2 cut(s) | 62, 361 |
| EcoT22I | ATGCAT | 2 cut(s) | 226, 247 |
| FaeI | CATG | 3 cut(s) | 228, 249, 361 |
| FaiI | YATR | 6 cut(s) | 72, 83, 226, 247, 359, 369 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 374, 406 |
| FaqI | GGGAC | 1 cut(s) | 48 |
| FatI | CATG | 3 cut(s) | 224, 245, 357 |
| FokI | GGATG | 3 cut(s) | 233, 358, 389 |
| FspBI | CTAG | 1 cut(s) | 161 |
| HapII | CCGG | 1 cut(s) | 182 |
| Hin1II | CATG | 3 cut(s) | 228, 249, 361 |
| HinfI | GANTC | 1 cut(s) | 106 |
| HpaII | CCGG | 1 cut(s) | 182 |
| Hpy166II | GTNNAC | 2 cut(s) | 18, 400 |
| Hpy188I | TCNGA | 2 cut(s) | 54, 220 |
| Hpy188III | TCNNGA | 2 cut(s) | 115, 274 |
| Hpy8I | GTNNAC | 2 cut(s) | 18, 400 |
| HpyAV | CCTTC | 2 cut(s) | 15, 194 |
| HpyCH4III | ACNGT | 2 cut(s) | 22, 297 |
| HpyCH4IV | ACGT | 1 cut(s) | 285 |
| HpyCH4V | TGCA | 3 cut(s) | 140, 224, 245 |
| HpyF3I | CTNAG | 1 cut(s) | 319 |
| HpySE526I | ACGT | 1 cut(s) | 285 |
| Hsp92II | CATG | 3 cut(s) | 228, 249, 361 |
| Kzo9I | GATC | 1 cut(s) | 117 |
| LpnPI | CCDG | 4 cut(s) | 195, 267, 377, 399 |
| LweI | GCATC | 1 cut(s) | 211 |
| MaeI | CTAG | 1 cut(s) | 161 |
| MaeII | ACGT | 1 cut(s) | 285 |
| MalI | GATC | 1 cut(s) | 119 |
| MboI | GATC | 1 cut(s) | 117 |
| MboII | GAAGA | 1 cut(s) | 38 |
| MluCI | AATT | 4 cut(s) | 96, 134, 267, 314 |
| MlyI | GAGTC | 1 cut(s) | 100 |
| MmeI | TCCRAC | 1 cut(s) | 330 |
| MnlI | CCTC | 4 cut(s) | 31, 54, 60, 405 |
| Mph1103I | ATGCAT | 2 cut(s) | 226, 247 |
| MroXI | GAANNNNTTC | 1 cut(s) | 45 |
| MseI | TTAA | 3 cut(s) | 144, 174, 418 |
| MspCI | CTTAAG | 1 cut(s) | 173 |
| MspI | CCGG | 1 cut(s) | 182 |
| NdeII | GATC | 1 cut(s) | 117 |
| NlaIII | CATG | 3 cut(s) | 228, 249, 361 |
| NlaIV | GGNNCC | 2 cut(s) | 42, 64 |
| NsiI | ATGCAT | 2 cut(s) | 226, 247 |
| NspI | RCATGY | 1 cut(s) | 228 |
| PaeI | GCATGC | 1 cut(s) | 228 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 122 |
| PdmI | GAANNNNTTC | 1 cut(s) | 45 |
| PleI | GAGTC | 1 cut(s) | 100 |
| PpsI | GAGTC | 1 cut(s) | 100 |
| PspN4I | GGNNCC | 2 cut(s) | 42, 64 |
| PspPI | GGNCC | 2 cut(s) | 62, 361 |
| RsaI | GTAC | 1 cut(s) | 193 |
| RsaNI | GTAC | 1 cut(s) | 192 |
| SaqAI | TTAA | 3 cut(s) | 144, 174, 418 |
| Sau3AI | GATC | 1 cut(s) | 117 |
| Sau96I | GGNCC | 2 cut(s) | 62, 361 |
| SchI | GAGTC | 1 cut(s) | 100 |
| SetI | ASST | 6 cut(s) | 46, 166, 180, 288, 329, 416 |
| SfaNI | GCATC | 1 cut(s) | 211 |
| SinI | GGWCC | 2 cut(s) | 62, 361 |
| SmlI | CTYRAG | 1 cut(s) | 173 |
| SmoI | CTYRAG | 1 cut(s) | 173 |
| SphI | GCATGC | 1 cut(s) | 228 |
| Sse9I | AATT | 4 cut(s) | 96, 134, 267, 314 |
| SspMI | CTAG | 1 cut(s) | 161 |
| TaaI | ACNGT | 2 cut(s) | 22, 297 |
| TaiI | ACGT | 1 cut(s) | 288 |
| TaqI | TCGA | 1 cut(s) | 116 |
| TaqII | GACCGA | 1 cut(s) | 50 |
| TasI | AATT | 4 cut(s) | 96, 134, 267, 314 |
| Tru1I | TTAA | 3 cut(s) | 144, 174, 418 |
| Tru9I | TTAA | 3 cut(s) | 144, 174, 418 |
| TscAI | CASTG | 1 cut(s) | 127 |
| TspDTI | ATGAA | 1 cut(s) | 384 |
| TspRI | CASTG | 1 cut(s) | 127 |
| Vha464I | CTTAAG | 1 cut(s) | 173 |
| VpaK11BI | GGWCC | 2 cut(s) | 62, 361 |
| XapI | RAATTY | 2 cut(s) | 134, 314 |
| XceI | RCATGY | 1 cut(s) | 228 |
| XmnI | GAANNNNTTC | 1 cut(s) | 45 |
| XspI | CTAG | 1 cut(s) | 161 |
| Zsp2I | ATGCAT | 2 cut(s) | 226, 247 |