Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4D

Orthogroup ID

OG0020476

Physical Location & Seq

Genomic Coordinates Forward (+)

13609956 .. 13635012

Gene Structure 25057 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4DG090000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1617 bp

ATGTTCGCATCCGATTCGAAATCGTTGTTCATTATAGAAATCTCAATCACAACCAAGTTCTATAGAAGATTCTCTCTCCTCGACACTGTTTCGCAGATTATACTCTCTCTATTATCCAAAACCCAGTTTCGCAGAGTAGCAGATTTTGGAGTAGCTAAGGTGGTTGATGCAACTAGAAAAGGGGCTAAATCCATGTCGGTCAGTGCCGGTTCTTGTGGTTACGTACATTGCTCCAGATGGCTTACAATGAAGAGGAATTGGAAGACCCAGTTTGAAGATTTCCCCAAACAGTTTGTATTGAACAGCAGGGTTAGATATGAGTGCTGCAGTTCTGAAGAATTTGAAAGCATCAAAAGTTGCTGGTGGAGCCAAGGAAGTATGCAGAGAAGCCAGCCAAGTTTAGCTTCAAAAATCAGAAAGTGTTGCAGACTCGGAAAGCCAAGAAATGGGGATGTTCACAGGGATCCATGGCCGCCGCCGTCATCTATTCCCCTCCCAGTTACACCTATTCCAAGGACAGTCCTAAGTCCACCAAATAAGGCATTGCTCGGGGCATACGGCATGGAAGTGGAAGTTAGAAGCTTGGCTCTTTTTTTGGTTCAAATATGCCTCTCAGCCATTTCTGGATCTCTCTGCAAATCTTGTGGAGTGCTGAAGTTGCATACTTCAATGGTAAAACTGAGGGCTATGGAGTTTTGGTATGCCGTTTTCGTATTGTTTTCCCTCTTCATTATTGGGAAAGCCGATGTTTATATTGTGACTGTCGAAGGAGAGCCTATTATAAGTTATAGAGGTGATGTTGATGGTTTTGAAGCCACTGCTGTGGAGTCTGATGAAAAGATCGACACCACTAGTGAATCAGTCACGTCCTATGCTCGACACCTTGAGAATAAACATGATATGCTTCTTGGAATGCTGTTTGAGCAAGGGACCTACAAGAAACTCTACAGCTATCAGCATCTTATAAATGGCTTTGCAGTTCATATTTCTCCCGAGCAGGCAGAAAGACTAATGCGTGCTCCGGGTGTGAAATCCGTGGAGAGAGATTGGAAGGTCCGGAGGCTTACAACTCACACACCACAGTTTTTAGGGCTTCCAACCGGAGTATGGCCAACAGGAGGTGGCTTTGATAGGGCTGGAGAAAATATTGTGATAGGGTTTGTGGACTCGGGGATTTACCCTCATCATCCAAGCTTTGCAAGCCACAGTACTGATCCTTACGGGCCTGTTCCCAAGTACAGAGGTACATGTGAAGTTGACCCAGACACCAAGAAGAGCTTCTGTAACGGAAAGATTATTGGAGCCCACCATTTCGCCAAAGCTGCAATAGCAGCTGGGGTGTTTAATCCAGTTATTGATTTCGCCTCTCCTATGGATGGTGATGGACATGGAAGTCACACTGCAGCTATTGCAGCTGGAAACAATGGAATTCCTGTCAGAATGCATGGCCATGAATTTGGCAAAGCAAGTGGGATGGCTCCCCGTGCCAGAATTGCTGTATATAAAGCTCTTTACAGGCTCTTTGGAGGGTTTGTAGCAGATGTAGTAGCCGCAATTGATCAGAAAGTGTTGCAGACTCGGAAAGCCAAGAAATGGGGATGTTCACAGGGATGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004252 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008236 GO:0016787 GO:0017171 GO:0019538 GO:0043170 GO:0044238 GO:0070011 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I9 PA Peptidase_S8 fn3_5

Protein Analysis

538

Amino Acids

59.44

Weight (kDa)

9.31

Isoelectric Point (pI)

31.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I9	PF05922	251 - 353	1.9e-15	Peptidase inhibitor I9
Peptidase_S8	PF00082	380 - 505	2.4e-08	Subtilase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0020476)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr1g0373161
rosa_samantha	Rh3AG023700 Rh3BG024400 Rh3DG024300 Rh4DG090000 Rh5BG377900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	782, 965
AasI	GACNNNNNNGTC	1 cut(s)	1392
AccB7I	CCANNNNNTGG	2 cut(s)	446, 1593
AccIII	TCCGGA	1 cut(s)	1056
AciI	CCGC	3 cut(s)	473, 476, 1551
AclWI	GGATC	4 cut(s)	458, 471, 634, 1208
AcoI	YGGCCR	3 cut(s)	470, 1109, 1447
AcsI	RAATTY	3 cut(s)	338, 1428, 1454
AcuI	CTGAAG	2 cut(s)	354, 674
AfaI	GTAC	4 cut(s)	225, 1210, 1238, 1246
AfiI	CCNNNNNNNGG	5 cut(s)	446, 1107, 1118, 1376, 1593
AflIII	ACRYGT	1 cut(s)	1247
AgsI	TTSAA	7 cut(s)	275, 301, 344, 408, 602, 669, 812
AhlI	ACTAGT	1 cut(s)	851
AjiI	CACGTC	1 cut(s)	867
AjuI	GAANNNNNNNTTGG	4 cut(s)	388, 420, 1262, 1294
AleI	CACNNNNGTG	1 cut(s)	821
Alw21I	GWGCWC	1 cut(s)	1021
AlwI	GGATC	4 cut(s)	458, 471, 634, 1208
Ama87I	CYCGRG	3 cut(s)	548, 992, 1168
Aor13HI	TCCGGA	1 cut(s)	1056
AoxI	GGCC	4 cut(s)	470, 1109, 1223, 1447
ApeKI	GCWGC	5 cut(s)	324, 1322, 1331, 1403, 1412
ApoI	RAATTY	3 cut(s)	338, 1428, 1454
Asp700I	GAANNNNTTC	1 cut(s)	1277
AspS9I	GGNCC	3 cut(s)	930, 1054, 1223
AsuC2I	CCSGG	1 cut(s)	1023
AsuHPI	GGTGA	2 cut(s)	806, 1391
AsuII	TTCGAA	1 cut(s)	17
AvaI	CYCGRG	3 cut(s)	548, 992, 1168
AvaII	GGWCC	2 cut(s)	930, 1054
BalI	TGGCCA	2 cut(s)	1111, 1449
BamHI	GGATCC	1 cut(s)	463
BanII	GRGCYC	1 cut(s)	1306
BbsI	GAAGAC	1 cut(s)	269
Bbv12I	GWGCWC	1 cut(s)	1021
BbvI	GCAGC	5 cut(s)	311, 1309, 1343, 1415, 1424
BccI	CCATC	5 cut(s)	231, 797, 1370, 1376, 1468
BceAI	ACGGC	3 cut(s)	463, 574, 689
BcgI	CGANNNNNNTGC	1 cut(s)	31
BclI	TGATCA	1 cut(s)	1558
BcnI	CCSGG	1 cut(s)	1023
BcuI	ACTAGT	1 cut(s)	851
BfaI	CTAG	2 cut(s)	174, 852
BfmI	CTRYAG	4 cut(s)	61, 325, 946, 1401
BisI	GCNGC	8 cut(s)	325, 473, 476, 1323, 1332, 1404, 1413, 1551
BlsI	GCNGC	8 cut(s)	326, 474, 477, 1324, 1333, 1405, 1414, 1552
BmcAI	AGTACT	1 cut(s)	1210
Bme1390I	CCNGG	1 cut(s)	1023
Bme18I	GGWCC	2 cut(s)	930, 1054
BmeT110I	CYCGRG	3 cut(s)	548, 992, 1168
BmgBI	CACGTC	1 cut(s)	867
BmgT120I	GGNCC	3 cut(s)	930, 1054, 1223
BmiI	GGNNCC	5 cut(s)	368, 465, 931, 1303, 1479
BmrFI	CCNGG	1 cut(s)	1023
BmrI	ACTGGG	3 cut(s)	118, 262, 491
BmsI	GCATC	4 cut(s)	17, 157, 357, 967
BmuI	ACTGGG	3 cut(s)	118, 262, 491
BpiI	GAAGAC	1 cut(s)	269
BpmI	CTGGAG	2 cut(s)	217, 1158
Bpu10I	CCTNAGC	1 cut(s)	156
Bpu14I	TTCGAA	1 cut(s)	17
BpuEI	CTTGAG	1 cut(s)	905
BpuMI	CCSGG	1 cut(s)	1023
BsaAI	YACGTR	1 cut(s)	223
BsaJI	CCNNGG	4 cut(s)	370, 467, 512, 1035
BsaWI	WCCGGW	2 cut(s)	1056, 1100
BsaXI	ACNNNNNCTCC	4 cut(s)	683, 713, 1518, 1548
Bsc4I	CCNNNNNNNGG	5 cut(s)	446, 1107, 1118, 1376, 1593
Bse118I	RCCGGY	1 cut(s)	206
Bse1I	ACTGG	4 cut(s)	124, 268, 497, 1349
Bse3DI	GCAATG	2 cut(s)	226, 542
BseAI	TCCGGA	1 cut(s)	1056
BseDI	CCNNGG	4 cut(s)	370, 467, 512, 1035
BseGI	GGATG	7 cut(s)	8, 457, 1186, 1381, 1479, 1604, 1616
BseLI	CCNNNNNNNGG	5 cut(s)	446, 1107, 1118, 1376, 1593
BseMI	GCAATG	2 cut(s)	226, 542
BseMII	CTCAG	2 cut(s)	627, 671
BseNI	ACTGG	4 cut(s)	124, 268, 497, 1349
BseRI	GAGGAG	1 cut(s)	68
BseXI	GCAGC	5 cut(s)	311, 1309, 1343, 1415, 1424
BseYI	CCCAGC	1 cut(s)	1334
BshFI	GGCC	4 cut(s)	472, 1111, 1225, 1449
BsiHKAI	GWGCWC	1 cut(s)	1021
BsiHKCI	CYCGRG	3 cut(s)	548, 992, 1168
BsiSI	CCGG	4 cut(s)	207, 1022, 1057, 1101
BslFI	GGGAC	1 cut(s)	943
BslI	CCNNNNNNNGG	5 cut(s)	446, 1107, 1118, 1376, 1593
BsmFI	GGGAC	1 cut(s)	943
BsmI	GAATGC	2 cut(s)	918, 1446
BsnI	GGCC	4 cut(s)	472, 1111, 1225, 1449
BsoBI	CYCGRG	3 cut(s)	548, 992, 1168
Bsp119I	TTCGAA	1 cut(s)	17
Bsp1286I	GDGCHC	2 cut(s)	1021, 1306
Bsp13I	TCCGGA	1 cut(s)	1056
Bsp143I	GATC	5 cut(s)	463, 626, 840, 1213, 1558
Bsp19I	CCATGG	1 cut(s)	467
BspACI	CCGC	3 cut(s)	473, 476, 1551
BspANI	GGCC	4 cut(s)	472, 1111, 1225, 1449
BspCNI	CTCAG	2 cut(s)	626, 672
BspEI	TCCGGA	1 cut(s)	1056
BspLI	GGNNCC	5 cut(s)	368, 465, 931, 1303, 1479
BspMAI	CTGCAG	2 cut(s)	329, 1405
BspPI	GGATC	4 cut(s)	458, 471, 634, 1208
BspQI	GCTCTTC	1 cut(s)	1268
BspT104I	TTCGAA	1 cut(s)	17
BsrDI	GCAATG	2 cut(s)	226, 542
BsrFI	RCCGGY	1 cut(s)	206
BsrI	ACTGG	4 cut(s)	124, 268, 497, 1349
BssAI	RCCGGY	1 cut(s)	206
BssECI	CCNNGG	4 cut(s)	370, 467, 512, 1035
BssMI	GATC	5 cut(s)	463, 626, 840, 1213, 1558
BssT1I	CCWWGG	3 cut(s)	370, 467, 512
Bst4CI	ACNGT	6 cut(s)	88, 291, 520, 763, 1083, 1208
Bst6I	CTCTTC	3 cut(s)	245, 731, 1268
BstAPI	GCANNNNNTGC	1 cut(s)	1409
BstBAI	YACGTR	1 cut(s)	223
BstBI	TTCGAA	1 cut(s)	17
BstC8I	GCNNGC	4 cut(s)	392, 999, 1017, 1201
BstDEI	CTNAG	4 cut(s)	156, 524, 613, 680
BstDSI	CCRYGG	2 cut(s)	467, 1035
BstF5I	GGATG	7 cut(s)	8, 457, 1186, 1381, 1479, 1604, 1616
BstKTI	GATC	5 cut(s)	466, 629, 843, 1216, 1561
BstMBI	GATC	5 cut(s)	463, 626, 840, 1213, 1558
BstNSI	RCATGY	1 cut(s)	1251
BstSCI	CCNGG	1 cut(s)	1021
BstSFI	CTRYAG	4 cut(s)	61, 325, 946, 1401
BstSNI	TACGTA	1 cut(s)	223
BstV1I	GCAGC	5 cut(s)	311, 1309, 1343, 1415, 1424
BstV2I	GAAGAC	1 cut(s)	269
BstX2I	RGATCY	2 cut(s)	463, 626
BstXI	CCANNNNNNTGG	2 cut(s)	823, 1457
BstYI	RGATCY	2 cut(s)	463, 626
BsuRI	GGCC	4 cut(s)	472, 1111, 1225, 1449
BtgI	CCRYGG	2 cut(s)	467, 1035
BtrI	CACGTC	1 cut(s)	867
BtsCI	GGATG	7 cut(s)	8, 457, 1186, 1381, 1479, 1604, 1616
BtsI	GCAGTG	2 cut(s)	816, 1398
BtsIMutI	CAGTG	4 cut(s)	84, 208, 816, 1398
Cac8I	GCNNGC	4 cut(s)	392, 999, 1017, 1201
Cfr10I	RCCGGY	1 cut(s)	206
Cfr13I	GGNCC	3 cut(s)	930, 1054, 1223
Csp6I	GTAC	4 cut(s)	224, 1209, 1237, 1245
CspCI	CAANNNNNGTGG	4 cut(s)	625, 660, 1450, 1485
CviAII	CATG	8 cut(s)	193, 468, 562, 896, 1248, 1388, 1445, 1451
CviQI	GTAC	4 cut(s)	224, 1209, 1237, 1245
DdeI	CTNAG	4 cut(s)	156, 524, 613, 680
DpnI	GATC	5 cut(s)	465, 628, 842, 1215, 1560
DpnII	GATC	5 cut(s)	463, 626, 840, 1213, 1558
DrdI	GACNNNNNNGTC	1 cut(s)	1392
DseDI	GACNNNNNNGTC	1 cut(s)	1392
EaeI	YGGCCR	3 cut(s)	470, 1109, 1447
Eam1104I	CTCTTC	3 cut(s)	245, 731, 1268
EarI	CTCTTC	3 cut(s)	245, 731, 1268
Eco105I	TACGTA	1 cut(s)	223
Eco130I	CCWWGG	3 cut(s)	370, 467, 512
Eco24I	GRGCYC	1 cut(s)	1306
Eco47I	GGWCC	2 cut(s)	930, 1054
Eco57I	CTGAAG	2 cut(s)	354, 674
Eco88I	CYCGRG	3 cut(s)	548, 992, 1168
EcoO109I	RGGNCCY	1 cut(s)	930
EcoRI	GAATTC	1 cut(s)	1428
EcoT14I	CCWWGG	3 cut(s)	370, 467, 512
EcoT22I	ATGCAT	1 cut(s)	1446
EcoT38I	GRGCYC	1 cut(s)	1306
ErhI	CCWWGG	3 cut(s)	370, 467, 512
FaeI	CATG	8 cut(s)	196, 471, 565, 899, 1251, 1391, 1448, 1454
FalI	AAGNNNNNCTT	4 cut(s)	388, 420, 1262, 1294
FaqI	GGGAC	1 cut(s)	943
FatI	CATG	8 cut(s)	192, 467, 561, 895, 1247, 1387, 1444, 1450
FbaI	TGATCA	1 cut(s)	1558
Fnu4HI	GCNGC	8 cut(s)	325, 473, 476, 1323, 1332, 1404, 1413, 1551
FokI	GGATG	5 cut(s)	464, 1173, 1388, 1486, 1611
FriOI	GRGCYC	1 cut(s)	1306
Fsp4HI	GCNGC	8 cut(s)	325, 473, 476, 1323, 1332, 1404, 1413, 1551
FspBI	CTAG	2 cut(s)	174, 852
GluI	GCNGC	8 cut(s)	325, 473, 476, 1323, 1332, 1404, 1413, 1551
GsaI	CCCAGC	1 cut(s)	1338
GsuI	CTGGAG	2 cut(s)	217, 1158
HaeIII	GGCC	4 cut(s)	472, 1111, 1225, 1449
HapII	CCGG	4 cut(s)	207, 1022, 1057, 1101
Hin1II	CATG	8 cut(s)	196, 471, 565, 899, 1251, 1391, 1448, 1454
HincII	GTYRAC	1 cut(s)	1258
HindII	GTYRAC	1 cut(s)	1258
HindIII	AAGCTT	2 cut(s)	580, 1192
HinfI	GANTC	7 cut(s)	14, 69, 429, 827, 857, 1166, 1576
HpaII	CCGG	4 cut(s)	207, 1022, 1057, 1101
HphI	GGTGA	2 cut(s)	806, 1391
Hpy166II	GTNNAC	5 cut(s)	457, 530, 1165, 1258, 1604
Hpy188I	TCNGA	8 cut(s)	13, 334, 416, 434, 832, 1439, 1563, 1581
Hpy188III	TCNNGA	4 cut(s)	234, 624, 992, 1057
Hpy8I	GTNNAC	5 cut(s)	457, 530, 1165, 1258, 1604
HpyAV	CCTTC	2 cut(s)	761, 1045
HpyCH4III	ACNGT	6 cut(s)	88, 291, 520, 763, 1083, 1208
HpyCH4IV	ACGT	2 cut(s)	222, 866
HpyF3I	CTNAG	4 cut(s)	156, 524, 613, 680
HpySE526I	ACGT	2 cut(s)	222, 866
Hsp92II	CATG	8 cut(s)	196, 471, 565, 899, 1251, 1391, 1448, 1454
Kpn2I	TCCGGA	1 cut(s)	1056
Ksp22I	TGATCA	1 cut(s)	1558
Kzo9I	GATC	5 cut(s)	463, 626, 840, 1213, 1558
LguI	GCTCTTC	1 cut(s)	1268
LmnI	GCTCC	5 cut(s)	236, 366, 1024, 1301, 1483
Lsp1109I	GCAGC	5 cut(s)	311, 1309, 1343, 1415, 1424
LweI	GCATC	4 cut(s)	17, 157, 357, 967
MaeI	CTAG	2 cut(s)	174, 852
MaeII	ACGT	2 cut(s)	222, 866
MaeIII	GTNAC	6 cut(s)	218, 499, 757, 862, 1283, 1394
MalI	GATC	5 cut(s)	465, 628, 842, 1215, 1560
MboI	GATC	5 cut(s)	463, 626, 840, 1213, 1558
MboII	GAAGA	7 cut(s)	78, 262, 274, 287, 347, 718, 1285
MfeI	CAATTG	1 cut(s)	1554
MflI	RGATCY	2 cut(s)	463, 626
MhlI	GDGCHC	2 cut(s)	1021, 1306
MlsI	TGGCCA	2 cut(s)	1111, 1449
MluCI	AATT	6 cut(s)	256, 338, 1428, 1454, 1491, 1554
MluNI	TGGCCA	2 cut(s)	1111, 1449
MlyI	GAGTC	4 cut(s)	423, 836, 1160, 1570
MmeI	TCCRAC	1 cut(s)	1121
Mox20I	TGGCCA	2 cut(s)	1111, 1449
Mph1103I	ATGCAT	1 cut(s)	1446
MroI	TCCGGA	1 cut(s)	1056
MroXI	GAANNNNTTC	1 cut(s)	1277
MscI	TGGCCA	2 cut(s)	1111, 1449
MseI	TTAA	1 cut(s)	1344
MslI	CAYNNNNRTG	4 cut(s)	566, 821, 1449, 1609
Msp20I	TGGCCA	2 cut(s)	1111, 1449
MspA1I	CMGCKG	2 cut(s)	1334, 1415
MspI	CCGG	4 cut(s)	207, 1022, 1057, 1101
MspR9I	CCNGG	1 cut(s)	1023
MunI	CAATTG	1 cut(s)	1554
Mva1269I	GAATGC	2 cut(s)	918, 1446
NciI	CCSGG	1 cut(s)	1023
NcoI	CCATGG	1 cut(s)	467
NdeII	GATC	5 cut(s)	463, 626, 840, 1213, 1558
NlaIII	CATG	8 cut(s)	196, 471, 565, 899, 1251, 1391, 1448, 1454
NlaIV	GGNNCC	5 cut(s)	368, 465, 931, 1303, 1479
NmuCI	GTSAC	3 cut(s)	757, 862, 1394
NsiI	ATGCAT	1 cut(s)	1446
NspI	RCATGY	1 cut(s)	1251
NspV	TTCGAA	1 cut(s)	17
OliI	CACNNNNGTG	1 cut(s)	821
PciI	ACATGT	1 cut(s)	1247
PciSI	GCTCTTC	1 cut(s)	1268
PctI	GAATGC	2 cut(s)	918, 1446
PdmI	GAANNNNTTC	1 cut(s)	1277
PfeI	GAWTC	3 cut(s)	14, 69, 857
PflMI	CCANNNNNTGG	2 cut(s)	446, 1593
PkrI	GCNGC	8 cut(s)	326, 474, 477, 1324, 1333, 1405, 1414, 1552
PleI	GAGTC	4 cut(s)	423, 835, 1160, 1570
PpsI	GAGTC	4 cut(s)	423, 835, 1160, 1570
Ppu21I	YACGTR	1 cut(s)	223
PpuMI	RGGWCCY	1 cut(s)	930
PscI	ACATGT	1 cut(s)	1247
PsiI	TTATAA	2 cut(s)	782, 965
Psp5II	RGGWCCY	1 cut(s)	930
PspFI	CCCAGC	1 cut(s)	1334
PspN4I	GGNNCC	5 cut(s)	368, 465, 931, 1303, 1479
PspPI	GGNCC	3 cut(s)	930, 1054, 1223
PspPPI	RGGWCCY	1 cut(s)	930
PstI	CTGCAG	2 cut(s)	329, 1405
PsuI	RGATCY	2 cut(s)	463, 626
PvuII	CAGCTG	2 cut(s)	1334, 1415
RsaI	GTAC	4 cut(s)	225, 1210, 1238, 1246
RsaNI	GTAC	4 cut(s)	224, 1209, 1237, 1245
RseI	CAYNNNNRTG	4 cut(s)	566, 821, 1449, 1609
SapI	GCTCTTC	1 cut(s)	1268
SaqAI	TTAA	1 cut(s)	1344
SatI	GCNGC	8 cut(s)	325, 473, 476, 1323, 1332, 1404, 1413, 1551
Sau3AI	GATC	5 cut(s)	463, 626, 840, 1213, 1558
Sau96I	GGNCC	3 cut(s)	930, 1054, 1223
ScaI	AGTACT	1 cut(s)	1210
SchI	GAGTC	4 cut(s)	423, 836, 1160, 1570
ScrFI	CCNGG	1 cut(s)	1023
SduI	GDGCHC	2 cut(s)	1021, 1306
SfaNI	GCATC	4 cut(s)	17, 157, 357, 967
SfcI	CTRYAG	4 cut(s)	61, 325, 946, 1401
SfuI	TTCGAA	1 cut(s)	17
SinI	GGWCC	2 cut(s)	930, 1054
SmiMI	CAYNNNNRTG	4 cut(s)	566, 821, 1449, 1609
SmlI	CTYRAG	1 cut(s)	884
SmoI	CTYRAG	1 cut(s)	884
SnaBI	TACGTA	1 cut(s)	223
SpeI	ACTAGT	1 cut(s)	851
Sse9I	AATT	6 cut(s)	256, 338, 1428, 1454, 1491, 1554
SsiI	CCGC	3 cut(s)	473, 476, 1551
SspI	AATATT	1 cut(s)	1147
SspMI	CTAG	2 cut(s)	174, 852
StyD4I	CCNGG	1 cut(s)	1021
StyI	CCWWGG	3 cut(s)	370, 467, 512
TaaI	ACNGT	6 cut(s)	88, 291, 520, 763, 1083, 1208
TaiI	ACGT	2 cut(s)	225, 869
TaqI	TCGA	5 cut(s)	17, 81, 765, 843, 877
TaqII	GACCGA	1 cut(s)	187
TasI	AATT	6 cut(s)	256, 338, 1428, 1454, 1491, 1554
TatI	WGTACW	2 cut(s)	1208, 1236
TauI	GCSGC	3 cut(s)	475, 478, 1553
TfiI	GAWTC	3 cut(s)	14, 69, 857
Tru1I	TTAA	1 cut(s)	1344
Tru9I	TTAA	1 cut(s)	1344
TscAI	CASTG	4 cut(s)	91, 208, 823, 1405
TseFI	GTSAC	3 cut(s)	757, 862, 1394
TseI	GCWGC	5 cut(s)	324, 1322, 1331, 1403, 1412
Tsp45I	GTSAC	3 cut(s)	757, 862, 1394
TspDTI	ATGAA	6 cut(s)	19, 263, 718, 849, 971, 1467
TspGWI	ACGGA	2 cut(s)	1024, 1302
TspRI	CASTG	4 cut(s)	91, 208, 823, 1405
Van91I	CCANNNNNTGG	2 cut(s)	446, 1593
VpaK11BI	GGWCC	2 cut(s)	930, 1054
XapI	RAATTY	3 cut(s)	338, 1428, 1454
XceI	RCATGY	1 cut(s)	1251
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1104
XmnI	GAANNNNTTC	1 cut(s)	1277
XspI	CTAG	2 cut(s)	174, 852
ZrmI	AGTACT	1 cut(s)	1210
Zsp2I	ATGCAT	1 cut(s)	1446

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.