Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4D

Orthogroup ID

OG0020318

Physical Location & Seq

Genomic Coordinates Reverse (-)

39401005 .. 39405706

Gene Structure 4702 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4DG202600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1893 bp

ATGGGTTTCTGCTCAAGTTCCACAGTAGCACGGGATGTGATGGATACAGTTTGTCTGAAGAAGAGCAATGAGAAGCCAAAAAATCAGAAGGTGAGTGAAAGCAAGAAGATAAGAGGAACAGTGGTGTTGATGAAGAAGAACGTGTTGGACTTCAACGACATGAAGGCATCGCTTTTTGATCGAATCCATGAGTTTCTGGGCAAGGGTGTTTCCATGCAGCTCATCAGTGCTACTCAACCTGAGCCTGCAGAAAATGGGTTGATGTTGAGGGGGAAGATTGGAAAGATAGCTTACTTGGAGAACTGGATTACAACCCTTACAGCCTTGACTGCTGGAGATACTGCTTTCACCGTTTCAATTGACTGGGATGAGTCAATGGGAGTTCCTGGGGCTTTGATGATCAGAAACCATCACCATAGCCAATTTTACCTCAAGACAATTACATTAGATGATGTTCCTGGACACGGTCGAGTCCATTTTGTCTGCAATTCCTGGGTTTACCCTGCACATCGTTACAAGTATAATCGGATATTTTTCTCCAACAAGGCCTACCTGCCATCTCAAACACCTGAGCTGTTACTCCCTTACAGGGAAGAAGAGCTAAGTAATCTCCGTGGAAGTGGATCAGGCGAGCTAAAGGAGTGGGACAGAGTCTATGACTATGCTTACTACAATGATTTGGGGAGTCCAGACAAGGGTCCAGAATATGCACGTCCTGTTCTTGGTGGATCACAAGAGTATCCCTATCCAAGAAGAGGAAGAACTGGTCGAAAACCAACTAAAACTGACCCCAACTCTGAAAGCAGGCTGTTTCTTCTAAGTCTAGACATCTATGTTCCAAGAGATGAGCGCTTTGGCCACGTGAAGTTTTCAGATTTTCTTGCATATGCCCTAAAATCCCTGGTTCAGATATTGCTCCCAGAGCTTAGATCTCTGTGTGATAAAACTATCGATGAGTTTGACACGTTTGAGGATGTACTTGATCTCTATGAAGGAGGCATCAAGCTACCAAATGGGCCTACACTCAAAAAATTAAGGGATCGTGTCCCTTGGGAGCTTCTCAGGGAATTACTTCGCTCAGATGGCGAGCGATTTCTCAAGTTCCCAATGCCTGATGTGATTAAAGAGGATAAATGTGCATGGAGGACGGATGAAGAGTTTGCAAGAGAAATGCTGGCAGGGGTTAACCCTGTTAATATCACCCGCCTTCAAGAATTTCCCCCAACCAGCAAGCTAGACCCTAAAGTACATGGGAATCAGAACAGTTCAATACGAAAAGAACAGATAGAAAGGAACATGAATGGCCTCAGTGTTGAAGAAGCAATTAAAAGCAACAGACTTTTCATATTAGATCATCATGATGCATTAATGACATACCTGAGACGAATAAACACAACAACGACAAAGACCTATGCCACCAGAACCTTCCTCTTGCTACAAGAAGATGGGACGTTGAAGCCTTTGGCAATTGAGTTAAGCCTTCCACATCCACAAGGGGAGCATCATGGTGCTGTCAGCAAAGTTTTCACTCCAGCAGAAGATGGCATCGAGGCTTCAGTTTGGCAGCTGGCCAAAGCTTACGCTGCTGTAAATGATTCTGGCTATCATCAACTTATCAGCCACTGGTTAAACACCCATGCTGTAATAGAGCCATTTATAATTGCAACAAATAGACAGTTGAGTGTGCTTCACCCGATACATAAGCTTTTGCAACCACACTTCCGGGACACGATGAACATAAATGCCCTGGCCAGGCAAATCCTAATCAATGCTGGAGGGGTGCTTGAGAAGACAGTCTTCCCAGCTCAATATGCCATGGAAATGTCTGCCGTTATTTATAAAAACTGGGTATTCACCGAGCAAGCACTACCTGCTGACTTGCTCAAGAGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006629 GO:0007275 GO:0008150 GO:0008152 GO:0009507 GO:0009536 GO:0009653 GO:0009791 GO:0009987 GO:0010015 GO:0010101 GO:0010102 GO:0010311 GO:0016491 GO:0016701 GO:0016702 GO:0022622 GO:0030258 GO:0031347 GO:0031348 GO:0032501 GO:0032502 GO:0034440 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044255 GO:0044424 GO:0044444 GO:0044464 GO:0048364 GO:0048519 GO:0048527 GO:0048528 GO:0048583 GO:0048585 GO:0048646 GO:0048731 GO:0048856 GO:0050789 GO:0051213 GO:0055114 GO:0065007 GO:0071704 GO:0080134 GO:0090696 GO:0090697 GO:0090698 GO:0099402 GO:1900366 GO:1905392 GO:1905393 GO:1990136 GO:2000068

KEGG Pathways

Metabolic & Signaling

ko00591 ko00592 ko01100 ko01110 map00591 map00592 map01100 map01110

Pfam Domains

Protein Families

Lipoxygenase PLAT

Protein Analysis

630

Amino Acids

71.8

Weight (kDa)

7.7

Isoelectric Point (pI)

38.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PLAT	PF01477	87 - 179	3.7e-19	PLAT/LH2 domain
Lipoxygenase	PF00305	194 - 630	3.8e-199	Lipoxygenase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0020318)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g15250 FvH4_4g15250 FvH4_4g15250
rosa_multiflora	Rmu_sc0003722.1_g000050
rosa_samantha	Rh4AG205600 Rh4DG202600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1658, 1839
Acc36I	ACCTGC	2 cut(s)	561, 1879
AciI	CCGC	1 cut(s)	1204
AclWI	GGATC	3 cut(s)	631, 736, 1047
AcoI	YGGCCR	3 cut(s)	856, 1569, 1749
AcsI	RAATTY	1 cut(s)	1214
AcuI	CTGAAG	2 cut(s)	77, 1539
AcvI	CACGTG	1 cut(s)	862
AfaI	GTAC	2 cut(s)	978, 1248
AfeI	AGCGCT	1 cut(s)	851
AfiI	CCNNNNNNNGG	6 cut(s)	464, 589, 695, 722, 755, 1752
AflIII	ACRYGT	2 cut(s)	141, 963
AgsI	TTSAA	6 cut(s)	154, 357, 1211, 1269, 1316, 1456
AjiI	CACGTC	1 cut(s)	713
AjnI	CCWGG	6 cut(s)	385, 457, 491, 900, 1746, 1751
AjuI	GAANNNNNNNTTGG	2 cut(s)	128, 160
Alw26I	GTCTC	1 cut(s)	1375
AlwI	GGATC	3 cut(s)	631, 736, 1047
AlwNI	CAGNNNCTG	1 cut(s)	1623
Aor51HI	AGCGCT	1 cut(s)	851
AoxI	GGCC	6 cut(s)	546, 856, 1016, 1303, 1569, 1749
ApeKI	GCWGC	3 cut(s)	217, 1564, 1583
ApoI	RAATTY	1 cut(s)	1214
AseI	ATTAAT	1 cut(s)	1367
Asp700I	GAANNNNTTC	1 cut(s)	1071
AspLEI	GCGC	1 cut(s)	852
AspS9I	GGNCC	2 cut(s)	698, 1016
AsuC2I	CCSGG	1 cut(s)	1724
AsuHPI	GGTGA	6 cut(s)	103, 340, 404, 1192, 1682, 1846
AvaII	GGWCC	1 cut(s)	698
BaeI	ACNNNNGTAYC	2 cut(s)	722, 755
BalI	TGGCCA	3 cut(s)	858, 1571, 1751
BbrPI	CACGTG	1 cut(s)	862
BbsI	GAAGAC	2 cut(s)	1789, 1796
BbvI	GCAGC	3 cut(s)	229, 1570, 1576
BccI	CCATC	6 cut(s)	34, 417, 565, 1076, 1439, 1535
BceAI	ACGGC	1 cut(s)	1814
BciT130I	CCWGG	6 cut(s)	387, 459, 493, 902, 1748, 1753
BciVI	GTATCC	2 cut(s)	37, 750
BclI	TGATCA	1 cut(s)	399
BcnI	CCSGG	1 cut(s)	1724
BcoDI	GTCTC	1 cut(s)	1375
BfaI	CTAG	2 cut(s)	824, 1235
BfmI	CTRYAG	1 cut(s)	246
BfoI	RGCGCY	1 cut(s)	853
BfuAI	ACCTGC	2 cut(s)	561, 1879
BfuI	GTATCC	2 cut(s)	37, 750
BglII	AGATCT	1 cut(s)	929
BisI	GCNGC	3 cut(s)	218, 1565, 1584
BlsI	GCNGC	3 cut(s)	219, 1566, 1585
Bme1390I	CCNGG	7 cut(s)	387, 459, 493, 902, 1724, 1748, 1753
Bme18I	GGWCC	1 cut(s)	698
BmgBI	CACGTC	1 cut(s)	713
BmgT120I	GGNCC	2 cut(s)	698, 1016
BmiI	GGNNCC	1 cut(s)	699
BmrFI	CCNGG	7 cut(s)	387, 459, 493, 902, 1724, 1748, 1753
BmrI	ACTGGG	2 cut(s)	373, 1855
BmsI	GCATC	5 cut(s)	176, 1008, 1351, 1510, 1554
BmuI	ACTGGG	2 cut(s)	373, 1855
BoxI	GACNNNNGTC	1 cut(s)	696
BpiI	GAAGAC	2 cut(s)	1789, 1796
BpmI	CTGGAG	3 cut(s)	354, 1515, 1794
Bpu10I	CCTNAGC	2 cut(s)	240, 570
BpuEI	CTTGAG	4 cut(s)	416, 1082, 1805, 1868
BpuMI	CCSGG	1 cut(s)	1724
Bsa29I	ATCGAT	1 cut(s)	951
BsaAI	YACGTR	1 cut(s)	862
BsaJI	CCNNGG	7 cut(s)	386, 492, 613, 900, 1049, 1746, 1815
Bsc4I	CCNNNNNNNGG	6 cut(s)	464, 589, 695, 722, 755, 1752
Bse1I	ACTGG	5 cut(s)	308, 368, 769, 1628, 1850
Bse3DI	GCAATG	1 cut(s)	73
BseBI	CCWGG	6 cut(s)	387, 459, 493, 902, 1748, 1753
BseCI	ATCGAT	1 cut(s)	951
BseDI	CCNNGG	7 cut(s)	386, 492, 613, 900, 1049, 1746, 1815
BseGI	GGATG	5 cut(s)	40, 373, 979, 1156, 1486
BseLI	CCNNNNNNNGG	6 cut(s)	464, 589, 695, 722, 755, 1752
BseMI	GCAATG	1 cut(s)	73
BseMII	CTCAG	6 cut(s)	231, 561, 1075, 1092, 1321, 1370
BseNI	ACTGG	5 cut(s)	308, 368, 769, 1628, 1850
BseXI	GCAGC	3 cut(s)	229, 1570, 1576
BseYI	CCCAGC	1 cut(s)	1801
BsgI	GTGCAG	1 cut(s)	489
Bsh1285I	CGRYCG	1 cut(s)	469
BshFI	GGCC	6 cut(s)	548, 858, 1018, 1305, 1571, 1751
BshVI	ATCGAT	1 cut(s)	951
BsiEI	CGRYCG	1 cut(s)	469
BsiSI	CCGG	1 cut(s)	1723
BslFI	GGGAC	4 cut(s)	659, 1031, 1462, 1739
BslI	CCNNNNNNNGG	6 cut(s)	464, 589, 695, 722, 755, 1752
BsmAI	GTCTC	1 cut(s)	1375
BsmBI	CGTCTC	1 cut(s)	1375
BsmFI	GGGAC	4 cut(s)	659, 1031, 1462, 1739
BsnI	GGCC	6 cut(s)	548, 858, 1018, 1305, 1571, 1751
Bsp143I	GATC	8 cut(s)	178, 399, 623, 728, 929, 982, 1039, 1351
Bsp19I	CCATGG	1 cut(s)	1815
BspACI	CCGC	1 cut(s)	1204
BspANI	GGCC	6 cut(s)	548, 858, 1018, 1305, 1571, 1751
BspCNI	CTCAG	6 cut(s)	232, 562, 1074, 1091, 1320, 1371
BspDI	ATCGAT	1 cut(s)	951
BspHI	TCATGA	1 cut(s)	1357
BspLI	GGNNCC	1 cut(s)	699
BspMAI	CTGCAG	1 cut(s)	250
BspMI	ACCTGC	2 cut(s)	561, 1879
BspPI	GGATC	3 cut(s)	631, 736, 1047
BspQI	GCTCTTC	2 cut(s)	56, 591
BsrDI	GCAATG	1 cut(s)	73
BsrI	ACTGG	5 cut(s)	308, 368, 769, 1628, 1850
BssECI	CCNNGG	7 cut(s)	386, 492, 613, 900, 1049, 1746, 1815
BssMI	GATC	8 cut(s)	178, 399, 623, 728, 929, 982, 1039, 1351
BssT1I	CCWWGG	2 cut(s)	1049, 1815
Bst2UI	CCWGG	6 cut(s)	387, 459, 493, 902, 1748, 1753
Bst4CI	ACNGT	8 cut(s)	25, 49, 121, 352, 467, 1265, 1677, 1795
Bst6I	CTCTTC	4 cut(s)	56, 591, 748, 1149
BstAPI	GCANNNNNTGC	1 cut(s)	1871
BstBAI	YACGTR	1 cut(s)	862
BstC8I	GCNNGC	8 cut(s)	246, 632, 806, 1088, 1176, 1232, 1569, 1863
BstDEI	CTNAG	9 cut(s)	240, 570, 602, 818, 926, 1061, 1078, 1307, 1379
BstDSI	CCRYGG	2 cut(s)	613, 1815
BstF5I	GGATG	5 cut(s)	40, 373, 979, 1156, 1486
BstH2I	RGCGCY	1 cut(s)	853
BstHHI	GCGC	1 cut(s)	852
BstKTI	GATC	8 cut(s)	181, 402, 626, 731, 932, 985, 1042, 1354
BstMAI	GTCTC	1 cut(s)	1375
BstMBI	GATC	8 cut(s)	178, 399, 623, 728, 929, 982, 1039, 1351
BstMCI	CGRYCG	1 cut(s)	469
BstMWI	GCNNNNNNNGC	6 cut(s)	329, 922, 1083, 1583, 1811, 1871
BstNI	CCWGG	6 cut(s)	387, 459, 493, 902, 1748, 1753
BstPAI	GACNNNNGTC	1 cut(s)	696
BstSCI	CCNGG	7 cut(s)	385, 457, 491, 900, 1722, 1746, 1751
BstSFI	CTRYAG	1 cut(s)	246
BstV1I	GCAGC	3 cut(s)	229, 1570, 1576
BstV2I	GAAGAC	2 cut(s)	1789, 1796
BstX2I	RGATCY	1 cut(s)	929
BstYI	RGATCY	1 cut(s)	929
Bsu15I	ATCGAT	1 cut(s)	951
BsuI	GTATCC	2 cut(s)	37, 750
BsuRI	GGCC	6 cut(s)	548, 858, 1018, 1305, 1571, 1751
BsuTUI	ATCGAT	1 cut(s)	951
BtgI	CCRYGG	2 cut(s)	613, 1815
BtgZI	GCGATG	1 cut(s)	153
BtrI	CACGTC	1 cut(s)	713
BtsCI	GGATG	5 cut(s)	40, 373, 979, 1156, 1486
BtsIMutI	CAGTG	4 cut(s)	126, 232, 1315, 1621
BveI	ACCTGC	2 cut(s)	561, 1879
Cac8I	GCNNGC	8 cut(s)	246, 632, 806, 1088, 1176, 1232, 1569, 1863
CaiI	CAGNNNCTG	1 cut(s)	1623
CciI	TCATGA	1 cut(s)	1357
CfoI	GCGC	1 cut(s)	852
Cfr13I	GGNCC	2 cut(s)	698, 1016
ClaI	ATCGAT	1 cut(s)	951
Csp6I	GTAC	2 cut(s)	977, 1247
CviQI	GTAC	2 cut(s)	977, 1247
DdeI	CTNAG	9 cut(s)	240, 570, 602, 818, 926, 1061, 1078, 1307, 1379
DpnI	GATC	8 cut(s)	180, 401, 625, 730, 931, 984, 1041, 1353
DpnII	GATC	8 cut(s)	178, 399, 623, 728, 929, 982, 1039, 1351
EaeI	YGGCCR	3 cut(s)	856, 1569, 1749
Eam1104I	CTCTTC	4 cut(s)	56, 591, 748, 1149
EarI	CTCTTC	4 cut(s)	56, 591, 748, 1149
Eco130I	CCWWGG	2 cut(s)	1049, 1815
Eco147I	AGGCCT	1 cut(s)	548
Eco47I	GGWCC	1 cut(s)	698
Eco47III	AGCGCT	1 cut(s)	851
Eco57I	CTGAAG	2 cut(s)	77, 1539
Eco72I	CACGTG	1 cut(s)	862
EcoRII	CCWGG	6 cut(s)	385, 457, 491, 900, 1746, 1751
EcoT14I	CCWWGG	2 cut(s)	1049, 1815
EcoT22I	ATGCAT	1 cut(s)	1366
ErhI	CCWWGG	2 cut(s)	1049, 1815
Esp3I	CGTCTC	1 cut(s)	1375
FalI	AAGNNNNNCTT	2 cut(s)	1781, 1813
FaqI	GGGAC	4 cut(s)	659, 1031, 1462, 1739
FauI	CCCGC	1 cut(s)	1211
FauNDI	CATATG	1 cut(s)	886
FbaI	TGATCA	1 cut(s)	399
Fnu4HI	GCNGC	3 cut(s)	218, 1565, 1584
FokI	GGATG	5 cut(s)	47, 380, 986, 1163, 1473
Fsp4HI	GCNGC	3 cut(s)	218, 1565, 1584
FspBI	CTAG	2 cut(s)	824, 1235
GlaI	GCGC	1 cut(s)	851
GluI	GCNGC	3 cut(s)	218, 1565, 1584
GsaI	CCCAGC	1 cut(s)	1805
GsuI	CTGGAG	3 cut(s)	354, 1515, 1794
HaeII	RGCGCY	1 cut(s)	853
HaeIII	GGCC	6 cut(s)	548, 858, 1018, 1305, 1571, 1751
HapII	CCGG	1 cut(s)	1723
HhaI	GCGC	1 cut(s)	852
Hin6I	GCGC	1 cut(s)	850
HinP1I	GCGC	1 cut(s)	850
HincII	GTYRAC	1 cut(s)	1186
HindII	GTYRAC	1 cut(s)	1186
HindIII	AAGCTT	2 cut(s)	1575, 1703
HinfI	GANTC	7 cut(s)	183, 371, 471, 651, 685, 1255, 1595
HpaI	GTTAAC	1 cut(s)	1186
HpaII	CCGG	1 cut(s)	1723
HphI	GGTGA	6 cut(s)	103, 340, 404, 1192, 1682, 1846
Hpy166II	GTNNAC	2 cut(s)	499, 1186
Hpy188I	TCNGA	9 cut(s)	57, 87, 404, 528, 799, 874, 909, 1081, 1260
Hpy188III	TCNNGA	7 cut(s)	433, 689, 701, 824, 1211, 1358, 1885
Hpy8I	GTNNAC	2 cut(s)	499, 1186
HpyAV	CCTTC	6 cut(s)	82, 157, 986, 1217, 1435, 1490
HpyCH4III	ACNGT	8 cut(s)	25, 49, 121, 352, 467, 1265, 1677, 1795
HpyCH4IV	ACGT	5 cut(s)	141, 712, 861, 965, 1451
HpyF10VI	GCNNNNNNNGC	6 cut(s)	329, 922, 1083, 1583, 1811, 1871
HpyF3I	CTNAG	9 cut(s)	240, 570, 602, 818, 926, 1061, 1078, 1307, 1379
HpySE526I	ACGT	5 cut(s)	141, 712, 861, 965, 1451
HspAI	GCGC	1 cut(s)	850
Ksp22I	TGATCA	1 cut(s)	399
KspAI	GTTAAC	1 cut(s)	1186
Kzo9I	GATC	8 cut(s)	178, 399, 623, 728, 929, 982, 1039, 1351
LguI	GCTCTTC	2 cut(s)	56, 591
LmnI	GCTCC	3 cut(s)	921, 1054, 1498
Lsp1109I	GCAGC	3 cut(s)	229, 1570, 1576
LweI	GCATC	5 cut(s)	176, 1008, 1351, 1510, 1554
MaeI	CTAG	2 cut(s)	824, 1235
MaeII	ACGT	5 cut(s)	141, 712, 861, 965, 1451
MaeIII	GTNAC	2 cut(s)	512, 576
MalI	GATC	8 cut(s)	180, 401, 625, 730, 931, 984, 1041, 1353
MboI	GATC	8 cut(s)	178, 399, 623, 728, 929, 982, 1039, 1351
MfeI	CAATTG	2 cut(s)	357, 1467
MflI	RGATCY	1 cut(s)	929
MlsI	TGGCCA	3 cut(s)	858, 1571, 1751
MluNI	TGGCCA	3 cut(s)	858, 1571, 1751
MlyI	GAGTC	4 cut(s)	380, 480, 660, 694
MmeI	TCCRAC	2 cut(s)	126, 564
Mox20I	TGGCCA	3 cut(s)	858, 1571, 1751
Mph1103I	ATGCAT	1 cut(s)	1366
MroXI	GAANNNNTTC	1 cut(s)	1071
MscI	TGGCCA	3 cut(s)	858, 1571, 1751
MseI	TTAA	8 cut(s)	1034, 1122, 1185, 1194, 1326, 1367, 1475, 1628
MslI	CAYNNNNRTG	3 cut(s)	1359, 1506, 1820
Msp20I	TGGCCA	3 cut(s)	858, 1571, 1751
MspA1I	CMGCKG	1 cut(s)	1567
MspI	CCGG	1 cut(s)	1723
MspR9I	CCNGG	7 cut(s)	387, 459, 493, 902, 1724, 1748, 1753
MunI	CAATTG	2 cut(s)	357, 1467
MvaI	CCWGG	6 cut(s)	387, 459, 493, 902, 1748, 1753
MwoI	GCNNNNNNNGC	6 cut(s)	329, 922, 1083, 1583, 1811, 1871
NciI	CCSGG	1 cut(s)	1724
NcoI	CCATGG	1 cut(s)	1815
NdeI	CATATG	1 cut(s)	886
NdeII	GATC	8 cut(s)	178, 399, 623, 728, 929, 982, 1039, 1351
NlaIV	GGNNCC	1 cut(s)	699
NsiI	ATGCAT	1 cut(s)	1366
PagI	TCATGA	1 cut(s)	1357
PceI	AGGCCT	1 cut(s)	548
PciSI	GCTCTTC	2 cut(s)	56, 591
PdmI	GAANNNNTTC	1 cut(s)	1071
PfeI	GAWTC	3 cut(s)	183, 1255, 1595
PflFI	GACNNNGTC	2 cut(s)	465, 650
PfoI	TCCNGGA	2 cut(s)	457, 1722
PkrI	GCNGC	3 cut(s)	219, 1566, 1585
PleI	GAGTC	4 cut(s)	379, 479, 659, 693
PmaCI	CACGTG	1 cut(s)	862
PmlI	CACGTG	1 cut(s)	862
PpsI	GAGTC	4 cut(s)	379, 479, 659, 693
Ppu21I	YACGTR	1 cut(s)	862
PshAI	GACNNNNGTC	1 cut(s)	696
PshBI	ATTAAT	1 cut(s)	1367
PsiI	TTATAA	2 cut(s)	1658, 1839
Psp6I	CCWGG	6 cut(s)	385, 457, 491, 900, 1746, 1751
PspCI	CACGTG	1 cut(s)	862
PspFI	CCCAGC	1 cut(s)	1801
PspGI	CCWGG	6 cut(s)	385, 457, 491, 900, 1746, 1751
PspN4I	GGNNCC	1 cut(s)	699
PspPI	GGNCC	2 cut(s)	698, 1016
PstI	CTGCAG	1 cut(s)	250
PstNI	CAGNNNCTG	1 cut(s)	1623
PsuI	RGATCY	1 cut(s)	929
PsyI	GACNNNGTC	2 cut(s)	465, 650
PvuII	CAGCTG	1 cut(s)	1567
RsaI	GTAC	2 cut(s)	978, 1248
RsaNI	GTAC	2 cut(s)	977, 1247
RseI	CAYNNNNRTG	3 cut(s)	1359, 1506, 1820
SapI	GCTCTTC	2 cut(s)	56, 591
SaqAI	TTAA	8 cut(s)	1034, 1122, 1185, 1194, 1326, 1367, 1475, 1628
SatI	GCNGC	3 cut(s)	218, 1565, 1584
Sau3AI	GATC	8 cut(s)	178, 399, 623, 728, 929, 982, 1039, 1351
Sau96I	GGNCC	2 cut(s)	698, 1016
SchI	GAGTC	4 cut(s)	380, 480, 660, 694
ScrFI	CCNGG	7 cut(s)	387, 459, 493, 902, 1724, 1748, 1753
SfaNI	GCATC	5 cut(s)	176, 1008, 1351, 1510, 1554
SfcI	CTRYAG	1 cut(s)	246
SinI	GGWCC	1 cut(s)	698
SmiMI	CAYNNNNRTG	3 cut(s)	1359, 1506, 1820
SmlI	CTYRAG	5 cut(s)	13, 431, 1097, 1784, 1883
SmoI	CTYRAG	5 cut(s)	13, 431, 1097, 1784, 1883
SseBI	AGGCCT	1 cut(s)	548
SsiI	CCGC	1 cut(s)	1204
SspMI	CTAG	2 cut(s)	824, 1235
StuI	AGGCCT	1 cut(s)	548
StyD4I	CCNGG	7 cut(s)	385, 457, 491, 900, 1722, 1746, 1751
StyI	CCWWGG	2 cut(s)	1049, 1815
TaaI	ACNGT	8 cut(s)	25, 49, 121, 352, 467, 1265, 1677, 1795
TaiI	ACGT	5 cut(s)	144, 715, 864, 968, 1454
TaqI	TCGA	5 cut(s)	181, 469, 769, 951, 1548
TatI	WGTACW	2 cut(s)	976, 1246
TfiI	GAWTC	3 cut(s)	183, 1255, 1595
Tru1I	TTAA	8 cut(s)	1034, 1122, 1185, 1194, 1326, 1367, 1475, 1628
Tru9I	TTAA	8 cut(s)	1034, 1122, 1185, 1194, 1326, 1367, 1475, 1628
TscAI	CASTG	4 cut(s)	126, 232, 1315, 1628
TseI	GCWGC	3 cut(s)	217, 1564, 1583
TspDTI	ATGAA	7 cut(s)	146, 176, 1005, 1167, 1313, 1333, 1748
TspGWI	ACGGA	2 cut(s)	602, 1163
TspRI	CASTG	4 cut(s)	126, 232, 1315, 1628
Tth111I	GACNNNGTC	2 cut(s)	465, 650
VpaK11BI	GGWCC	1 cut(s)	698
VspI	ATTAAT	1 cut(s)	1367
XapI	RAATTY	1 cut(s)	1214
XbaI	TCTAGA	1 cut(s)	823
XmnI	GAANNNNTTC	1 cut(s)	1071
XspI	CTAG	2 cut(s)	824, 1235
Zsp2I	ATGCAT	1 cut(s)	1366

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.