Rh5BG174500

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
Physical Location & Seq
Forward (+)
18290033 .. 18290374
342 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG174500.1

Sequence Viewer

Length: 342 bp
ATGGGCGTTAAAGTTACACCCTTTCCCCTTGAGAATATAGGTGGTAATGAGATTCGAAGTTTGATTTTCTGTCAAAAAGCATTTGATATTGCAAAAGCAGATTACTGTTATGGATATGACAGAGATGGAGGTTCCCAGATTTGGGACCAGCAGCCAACTAAGTGCTGGCGTTTTGGTAATGTATTTGAGCAAGACAATGGTTACTTTAATCCAACAGATTCTAGTGGTTCTAATGCAACATCAACAAGTGATTCAAATAGAAGTCGCAGCATTAGTGATTGTAAGGCTGCTTGTTTGGCAGATTGTGACCGTCTTGGATTCATTTTTCTGTTTGCTACCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

113

Amino Acids

12.54

Weight (kDa)

4.73

Isoelectric Point (pI)

50.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0026420)

Species Orthologous Gene IDs
rosa_samantha Rh5BG174500 Rh5BG175300 Rh5CG192400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfiI CCNNNNNNNGG 2 cut(s) 141, 142
AgsI TTSAA 1 cut(s) 255
ApeKI GCWGC 3 cut(s) 151, 267, 287
AspS9I GGNCC 1 cut(s) 145
AsuII TTCGAA 1 cut(s) 55
AvaII GGWCC 1 cut(s) 145
BbvI GCAGC 3 cut(s) 163, 274, 279
BccI CCATC 1 cut(s) 119
BfaI CTAG 1 cut(s) 222
BisI GCNGC 3 cut(s) 152, 268, 288
BlsI GCNGC 3 cut(s) 153, 269, 289
Bme18I GGWCC 1 cut(s) 145
BmgT120I GGNCC 1 cut(s) 145
BmiI GGNNCC 2 cut(s) 133, 146
Bpu14I TTCGAA 1 cut(s) 55
BpuEI CTTGAG 1 cut(s) 50
Bsc4I CCNNNNNNNGG 2 cut(s) 141, 142
BseLI CCNNNNNNNGG 2 cut(s) 141, 142
BseXI GCAGC 3 cut(s) 163, 274, 279
BslFI GGGAC 1 cut(s) 158
BslI CCNNNNNNNGG 2 cut(s) 141, 142
BsmFI GGGAC 1 cut(s) 158
Bsp119I TTCGAA 1 cut(s) 55
BspLI GGNNCC 2 cut(s) 133, 146
BspT104I TTCGAA 1 cut(s) 55
Bst4CI ACNGT 2 cut(s) 107, 311
BstBI TTCGAA 1 cut(s) 55
BstC8I GCNNGC 1 cut(s) 167
BstDEI CTNAG 1 cut(s) 159
BstMWI GCNNNNNNNGC 1 cut(s) 296
BstV1I GCAGC 3 cut(s) 163, 274, 279
Cac8I GCNNGC 1 cut(s) 167
Cfr13I GGNCC 1 cut(s) 145
CviJI RGCY 2 cut(s) 154, 287
CviKI_1 RGCY 2 cut(s) 154, 287
DdeI CTNAG 1 cut(s) 159
Eco47I GGWCC 1 cut(s) 145
FaiI YATR 3 cut(s) 38, 111, 117
FaqI GGGAC 1 cut(s) 158
Fnu4HI GCNGC 3 cut(s) 152, 268, 288
Fsp4HI GCNGC 3 cut(s) 152, 268, 288
FspBI CTAG 1 cut(s) 222
GluI GCNGC 3 cut(s) 152, 268, 288
HinfI GANTC 4 cut(s) 52, 218, 251, 318
HpyCH4III ACNGT 2 cut(s) 107, 311
HpyCH4V TGCA 2 cut(s) 92, 236
HpyF10VI GCNNNNNNNGC 1 cut(s) 296
HpyF3I CTNAG 1 cut(s) 159
LpnPI CCDG 3 cut(s) 149, 151, 161
Lsp1109I GCAGC 3 cut(s) 163, 274, 279
MaeI CTAG 1 cut(s) 222
MaeIII GTNAC 3 cut(s) 13, 200, 305
MmeI TCCRAC 1 cut(s) 236
MnlI CCTC 1 cut(s) 122
MseI TTAA 2 cut(s) 9, 207
MwoI GCNNNNNNNGC 1 cut(s) 296
NlaIV GGNNCC 2 cut(s) 133, 146
NmuCI GTSAC 1 cut(s) 305
NspV TTCGAA 1 cut(s) 55
PfeI GAWTC 4 cut(s) 52, 218, 251, 318
PkrI GCNGC 3 cut(s) 153, 269, 289
PspN4I GGNNCC 2 cut(s) 133, 146
PspPI GGNCC 1 cut(s) 145
SaqAI TTAA 2 cut(s) 9, 207
SatI GCNGC 3 cut(s) 152, 268, 288
Sau96I GGNCC 1 cut(s) 145
SetI ASST 3 cut(s) 43, 133, 341
SfuI TTCGAA 1 cut(s) 55
SgeI CNNG 9 cut(s) 41, 148, 160, 178, 203, 234, 258, 303, 326
SinI GGWCC 1 cut(s) 145
SmlI CTYRAG 1 cut(s) 29
SmoI CTYRAG 1 cut(s) 29
SspMI CTAG 1 cut(s) 222
TaaI ACNGT 2 cut(s) 107, 311
TaqI TCGA 1 cut(s) 55
TfiI GAWTC 4 cut(s) 52, 218, 251, 318
Tru1I TTAA 2 cut(s) 9, 207
Tru9I TTAA 2 cut(s) 9, 207
TseFI GTSAC 1 cut(s) 305
TseI GCWGC 3 cut(s) 151, 267, 287
Tsp45I GTSAC 1 cut(s) 305
TspDTI ATGAA 1 cut(s) 310
VpaK11BI GGWCC 1 cut(s) 145
XcmI CCANNNNNNNNNTGG 1 cut(s) 162
XspI CTAG 1 cut(s) 222
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.