No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_sc0000805.1_g000054 Rmu_sc0004689.1_g000009 Rmu_sc0030761.1_g000001 |
| rosa_samantha | Rh5CG251200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 79 |
| AfaI | GTAC | 1 cut(s) | 248 |
| AjiI | CACGTC | 1 cut(s) | 136 |
| AluBI | AGCT | 2 cut(s) | 155, 161 |
| AluI | AGCT | 2 cut(s) | 155, 161 |
| Alw26I | GTCTC | 1 cut(s) | 291 |
| Ama87I | CYCGRG | 1 cut(s) | 119 |
| AoxI | GGCC | 1 cut(s) | 93 |
| ApeKI | GCWGC | 1 cut(s) | 179 |
| AsuHPI | GGTGA | 1 cut(s) | 211 |
| AvaI | CYCGRG | 1 cut(s) | 119 |
| BbsI | GAAGAC | 1 cut(s) | 273 |
| BbvI | GCAGC | 1 cut(s) | 191 |
| BccI | CCATC | 1 cut(s) | 92 |
| BcoDI | GTCTC | 1 cut(s) | 291 |
| BfaI | CTAG | 2 cut(s) | 126, 337 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 188 |
| BisI | GCNGC | 1 cut(s) | 180 |
| BlsI | GCNGC | 1 cut(s) | 181 |
| BmeT110I | CYCGRG | 1 cut(s) | 119 |
| BmgBI | CACGTC | 1 cut(s) | 136 |
| BmsI | GCATC | 1 cut(s) | 94 |
| BpiI | GAAGAC | 1 cut(s) | 273 |
| BpuEI | CTTGAG | 3 cut(s) | 74, 141, 227 |
| BsaI | GGTCTC | 1 cut(s) | 291 |
| Bse1I | ACTGG | 1 cut(s) | 49 |
| BseGI | GGATG | 2 cut(s) | 210, 238 |
| BseNI | ACTGG | 1 cut(s) | 49 |
| BseXI | GCAGC | 1 cut(s) | 191 |
| BshFI | GGCC | 1 cut(s) | 95 |
| BsiHKCI | CYCGRG | 1 cut(s) | 119 |
| BsmAI | GTCTC | 1 cut(s) | 291 |
| BsnI | GGCC | 1 cut(s) | 95 |
| Bso31I | GGTCTC | 1 cut(s) | 291 |
| BsoBI | CYCGRG | 1 cut(s) | 119 |
| BspACI | CCGC | 1 cut(s) | 79 |
| BspANI | GGCC | 1 cut(s) | 95 |
| BspTNI | GGTCTC | 1 cut(s) | 291 |
| BsrI | ACTGG | 1 cut(s) | 49 |
| Bst4CI | ACNGT | 1 cut(s) | 145 |
| BstC8I | GCNNGC | 2 cut(s) | 83, 153 |
| BstDEI | CTNAG | 2 cut(s) | 184, 294 |
| BstF5I | GGATG | 2 cut(s) | 210, 238 |
| BstMAI | GTCTC | 1 cut(s) | 291 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 167, 176, 188 |
| BstV1I | GCAGC | 1 cut(s) | 191 |
| BstV2I | GAAGAC | 1 cut(s) | 273 |
| BsuRI | GGCC | 1 cut(s) | 95 |
| BtrI | CACGTC | 1 cut(s) | 136 |
| BtsCI | GGATG | 2 cut(s) | 210, 238 |
| Cac8I | GCNNGC | 2 cut(s) | 83, 153 |
| Csp6I | GTAC | 1 cut(s) | 247 |
| CviJI | RGCY | 8 cut(s) | 48, 95, 124, 129, 155, 161, 182, 279 |
| CviKI_1 | RGCY | 8 cut(s) | 48, 95, 124, 129, 155, 161, 182, 279 |
| CviQI | GTAC | 1 cut(s) | 247 |
| DdeI | CTNAG | 2 cut(s) | 184, 294 |
| EciI | GGCGGA | 1 cut(s) | 68 |
| Eco31I | GGTCTC | 1 cut(s) | 291 |
| Eco32I | GATATC | 1 cut(s) | 56 |
| Eco88I | CYCGRG | 1 cut(s) | 119 |
| EcoRV | GATATC | 1 cut(s) | 56 |
| FaiI | YATR | 4 cut(s) | 113, 228, 230, 257 |
| FauNDI | CATATG | 1 cut(s) | 228 |
| Fnu4HI | GCNGC | 1 cut(s) | 180 |
| FokI | GGATG | 2 cut(s) | 197, 245 |
| Fsp4HI | GCNGC | 1 cut(s) | 180 |
| FspBI | CTAG | 2 cut(s) | 126, 337 |
| GluI | GCNGC | 1 cut(s) | 180 |
| HaeIII | GGCC | 1 cut(s) | 95 |
| HindIII | AAGCTT | 1 cut(s) | 159 |
| HinfI | GANTC | 5 cut(s) | 102, 115, 220, 236, 319 |
| HphI | GGTGA | 1 cut(s) | 211 |
| Hpy188I | TCNGA | 1 cut(s) | 166 |
| Hpy188III | TCNNGA | 3 cut(s) | 51, 71, 119 |
| HpyAV | CCTTC | 1 cut(s) | 269 |
| HpyCH4III | ACNGT | 1 cut(s) | 145 |
| HpyCH4IV | ACGT | 2 cut(s) | 135, 311 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 167, 176, 188 |
| HpyF3I | CTNAG | 2 cut(s) | 184, 294 |
| HpySE526I | ACGT | 2 cut(s) | 135, 311 |
| LmnI | GCTCC | 1 cut(s) | 34 |
| LpnPI | CCDG | 6 cut(s) | 23, 30, 36, 46, 95, 285 |
| Lsp1109I | GCAGC | 1 cut(s) | 191 |
| LweI | GCATC | 1 cut(s) | 94 |
| MaeI | CTAG | 2 cut(s) | 126, 337 |
| MaeII | ACGT | 2 cut(s) | 135, 311 |
| MaeIII | GTNAC | 2 cut(s) | 5, 316 |
| MboII | GAAGA | 1 cut(s) | 278 |
| MluCI | AATT | 1 cut(s) | 17 |
| MlyI | GAGTC | 2 cut(s) | 214, 313 |
| MnlI | CCTC | 1 cut(s) | 181 |
| MslI | CAYNNNNRTG | 2 cut(s) | 215, 231 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 167, 176, 188 |
| NdeI | CATATG | 1 cut(s) | 228 |
| NmuCI | GTSAC | 1 cut(s) | 316 |
| PaeR7I | CTCGAG | 1 cut(s) | 119 |
| PfeI | GAWTC | 3 cut(s) | 102, 115, 236 |
| PkrI | GCNGC | 1 cut(s) | 181 |
| PleI | GAGTC | 2 cut(s) | 214, 313 |
| PpsI | GAGTC | 2 cut(s) | 214, 313 |
| RsaI | GTAC | 1 cut(s) | 248 |
| RsaNI | GTAC | 1 cut(s) | 247 |
| RseI | CAYNNNNRTG | 2 cut(s) | 215, 231 |
| SatI | GCNGC | 1 cut(s) | 180 |
| SchI | GAGTC | 2 cut(s) | 214, 313 |
| SetI | ASST | 8 cut(s) | 12, 65, 138, 157, 163, 201, 314, 338 |
| SfaNI | GCATC | 1 cut(s) | 94 |
| Sfr274I | CTCGAG | 1 cut(s) | 119 |
| SlaI | CTCGAG | 1 cut(s) | 119 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 215, 231 |
| SmlI | CTYRAG | 4 cut(s) | 89, 119, 156, 242 |
| SmoI | CTYRAG | 4 cut(s) | 89, 119, 156, 242 |
| Sse9I | AATT | 1 cut(s) | 17 |
| SsiI | CCGC | 1 cut(s) | 79 |
| SspMI | CTAG | 2 cut(s) | 126, 337 |
| TaaI | ACNGT | 1 cut(s) | 145 |
| TaiI | ACGT | 2 cut(s) | 138, 314 |
| TaqI | TCGA | 1 cut(s) | 120 |
| TasI | AATT | 1 cut(s) | 17 |
| TfiI | GAWTC | 3 cut(s) | 102, 115, 236 |
| TseFI | GTSAC | 1 cut(s) | 316 |
| TseI | GCWGC | 1 cut(s) | 179 |
| Tsp45I | GTSAC | 1 cut(s) | 316 |
| TspDTI | ATGAA | 1 cut(s) | 272 |
| TspGWI | ACGGA | 1 cut(s) | 304 |
| XhoI | CTCGAG | 1 cut(s) | 119 |
| XspI | CTAG | 2 cut(s) | 126, 337 |