Rh5DG172000

Multiple C2 and transmembrane domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
Physical Location & Seq
Forward (+)
18423625 .. 18426765
3141 bp
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UTR
Exon/CDS
Intron
Rh5DG172000.1

Sequence Viewer

Length: 2304 bp
ATGACTAACCAGGAAGACTTTTCCCTCAAGGAAACCTCACCGAACATTAGTAGCCGGAGGATCTCCACTGGTCCGGTGACTAGTCATGATCTTGTGGAGCACATGCAGTATCTGTATGTGAGGATTGTGAAAGCCAGAGAGTTGCCACTTCTCTGTGACCCTTATGTTGAACTGAAACTTGGAAACTACAGAGGAACCACAAGGCCCTTCCAGAAGACTCCAAATCCAGTATGGAACCAAGTGTTCGCTTTCCCCAAAGACAGAATTCAAGATCTAACTATGGAGATTTTGGTGAAGGACAAGGCTGTTGTCGTGGACGATCAAGGTCAAGCGACCATTGGCAAGTTTTCTTTCATTGTTCCTGAGGCTCCCATGATAATTCCCCCGAATAGTGCATTGGCACCGGAATGGTATAGGCTTGATGGTCGAAATGGGGTTAAGATTCGAGGAGAGTTGATGCTGTCCTTTTGGTTTGGAACACAGGCAGACGAGGTTTTTTCAGAAGCTTGGCACGCTGATGCGGCTGCGGTGAGTGAGGATTGTGTTTCAACTACTCATTCCAAAGTTTACCTTTCGCCTAGGCTTTGGTATCTTAGAGTGAATGTGATTGAAGCTCAGGATCTGATACTTAAAGTCAACAGTAACAAGGTAGAGACATCAGACTTGTTTGTGACAGCAGGTCTTGGGAACTTATTTACGAGAAGTAGAATTTCTAAAAATAAGAGTGTAAACCCGAAGTGGAATGAAGACCTAATGTTTGTTGCAGCAGAACCATTTGATGATCCTTTGGTTGTTAGTGTGGTGGAGTTGGTGAACAAAATGGAGGAGCATTGCATAGGGATGTGTGTGATTCCTCTAAGCGATGTGGAGAGGAGGATAGGGGCTGCTCCTCCCGCAGATAAGTGGTATAATCTTTCCATGATGGTTGAGGGCCAGCAGCAAGAGGTGAAGTTTGCTAGTAAGCTCCACATGATGATTAGTTTGGATGGGGGATACCATGTTCTTGATGAGCCTACTAATAATATTAGTGATCTTCTCCCGTCAGCAAAGTTATTGTGGAGACCTCCCATTGGGGTTTTGGAGTTGGGAATCTTGAATGCTACTGGACTATCACCTATAAAGAACAATAAGCCTTCGAATCAGGTCTGGGCATATTGTGTGGCGAAATATGGGACAAAGTGGGTAAGAACAAGGACGATTGTTGACAGTTCGGAGCCAAAATGGAATGAACAATATACTTGGGAAGTCTATGATCCATGTACAGTCATTACCATTGGAGTTTTTGACAATGGGCATCTACAATGTGGGAACAATAAACTGGATTTACCTATGGGGAAGGTAAGGATTCGGTTATCTACTCTCGAAACTGACAGGGTTTACACAAATTCTTATCCCCTTGTGGTTCCAACACCTTCTGGTTTAAAGAAGATGGGTGAAATCCAATTGGCTGTAAGATTTTCTTGTTCATCTTTGCTTAACTTGCTCAATCAATATTCACAGCCACTGCTCCCCAAATTGCATTACATTCTCCCACTATCTATATATCAGCTTGCTACCTTAAGGCACCAAGCCACTAATATTATCTCAACGAGGTTGGGTCGGGCTGAGCCACCATTAAGGAAAGAGGTTGTGGATTACATGCTGGATGCCAGTGCACATATATGGAGCATTAGAAGAGGCAGAGCCAATTTCAACAGGATCATCAATCTCTTTGATGGTTTTGTTGCACTTTACAAATGGTTTGAGGAGATCCGCAAATGGACTAATCCCATTGCCACAGGGATTGTCCACGTTATCTTCTTGGTTGTGCTTTTCTTTCCTGGTGTGATACTTCCCACTATGTTTTTCTACTCCTGTGGCCTAGGGATTTGGCGCTTCAGGAGGAGGCCTAGACAGATTGCATTCATAGATACTGAATTGTCTACTGCCTCCAATGTAACTCCAGAAGACTTGGCTGAGGAGTTTGATCCGTTTCCATCAGGAAAGAATAGCATTGATGATCTAAGAAGGAGATACGATTTACTACGTAGCCTTGGGGGAAGGATTCAGACAGTGCTTGGTGACATAGCAACTCTAGGGGAGAGAGTGCAATCTTTGGTGAGCTGGAGGGATCCAAGAGCTACATTTATGTTTGTTGTCTTCTCTTTTGTTGCTGGGGTAATAGCTTACGTTGTCCCTTTCAGAATGTTAGCTATTGTTGCAATCTTCCATGAGCTAAGGCACCCAAGTTTACGTATCGACCTCCCTTCATTCCCACAAAACTTTCTCAGGAGGATGCCAGCCAGATCTGATACAATGATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

767

Amino Acids

87.23

Weight (kDa)

8.63

Isoelectric Point (pI)

42.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C2 PF00168 37 - 137 8.6e-13 C2 domain
C2 PF00168 196 - 305 1.4e-15 C2 domain
C2 PF00168 358 - 466 4.9e-16 C2 domain
PRT_C PF08372 611 - 767 2.5e-56 Plant phosphoribosyltransferase C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014894)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G20080
fragaria_vesca FvH4_3g14700
malus_domestica MD09G1226100.v1.1 MD11G1015900.v1.1
prunus_persica Prupe.4G132300_v2.0.a1 Prupe.6G014000_v2.0.a1
pyrus_communis pycom11g01110
rosa_chinensis RchiOBHm_Chr5g0024191
rosa_laevigata RLG00000032778
rosa_multiflora Rmu_sc0004033.1_g000007
rosa_rugosa Rorug05G0082500
rosa_samantha Rh5AG173000 Rh5BG169700 Rh5CG185500 Rh5DG172000
rosa_wichuraiana Rw5G015610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 668
AccB1I GGYRCC 3 cut(s) 400, 1563, 2220
AccI GTMKAC 1 cut(s) 1922
AciI CCGC 4 cut(s) 521, 527, 894, 1753
AclWI GGATC 9 cut(s) 68, 627, 776, 1247, 1706, 1744, 1961, 2105, 2118
AcsI RAATTY 3 cut(s) 264, 708, 1384
AcuI CTGAAG 1 cut(s) 1861
AfaI GTAC 1 cut(s) 1261
AfiI CCNNNNNNNGG 1 cut(s) 1070
AflII CTTAAG 1 cut(s) 1558
AgsI TTSAA 6 cut(s) 170, 269, 549, 611, 1096, 1693
AhdI GACNNNNNGTC 1 cut(s) 678
AhlI ACTAGT 1 cut(s) 80
AjnI CCWGG 2 cut(s) 9, 1819
AjuI GAANNNNNNNTTGG 4 cut(s) 162, 194, 380, 412
AloI GAACNNNNNNTCC 2 cut(s) 984, 1016
AluBI AGCT 9 cut(s) 506, 614, 964, 1549, 2103, 2120, 2165, 2192, 2215
AluI AGCT 9 cut(s) 506, 614, 964, 1549, 2103, 2120, 2165, 2192, 2215
Alw21I GWGCWC 2 cut(s) 102, 1657
Alw26I GTCTC 2 cut(s) 647, 1054
Alw44I GTGCAC 1 cut(s) 1653
AlwI GGATC 9 cut(s) 68, 627, 776, 1247, 1706, 1744, 1961, 2105, 2118
AlwNI CAGNNNCTG 3 cut(s) 112, 622, 1504
AoxI GGCC 4 cut(s) 203, 931, 1858, 1886
ApaLI GTGCAC 1 cut(s) 1653
ApeKI GCWGC 4 cut(s) 524, 764, 884, 937
ApoI RAATTY 3 cut(s) 264, 708, 1384
ArsI GACNNNNNNTTYG 2 cut(s) 740, 772
AspA2I CCTAGG 2 cut(s) 578, 1861
AspLEI GCGC 1 cut(s) 1875
AspS9I GGNCC 3 cut(s) 71, 204, 931
AsuII TTCGAA 1 cut(s) 1136
AvaII GGWCC 1 cut(s) 71
AvrII CCTAGG 2 cut(s) 578, 1861
AxyI CCTNAGG 1 cut(s) 363
BaeGI GKGCMC 1 cut(s) 1657
BamHI GGATCC 1 cut(s) 2110
BanI GGYRCC 3 cut(s) 400, 1563, 2220
BbsI GAAGAC 5 cut(s) 21, 221, 753, 1953, 2131
Bbv12I GWGCWC 2 cut(s) 102, 1657
BbvCI CCTCAGC 1 cut(s) 1956
BbvI GCAGC 4 cut(s) 511, 776, 871, 949
BccI CCATC 6 cut(s) 416, 916, 980, 1423, 1709, 1984
BciT130I CCWGG 2 cut(s) 11, 1821
BciVI GTATCC 1 cut(s) 986
BcoDI GTCTC 2 cut(s) 647, 1054
BcuI ACTAGT 1 cut(s) 80
BfaI CTAG 6 cut(s) 81, 579, 957, 1862, 1890, 2075
BfmI CTRYAG 1 cut(s) 187
BfoI RGCGCY 1 cut(s) 1876
BfrI CTTAAG 1 cut(s) 1558
BfuAI ACCTGC 1 cut(s) 668
BfuI GTATCC 1 cut(s) 986
BglII AGATCT 2 cut(s) 271, 2285
BisI GCNGC 5 cut(s) 522, 525, 765, 885, 938
BlnI CCTAGG 2 cut(s) 578, 1861
BlpI GCTNAGC 1 cut(s) 1605
BlsI GCNGC 5 cut(s) 523, 526, 766, 886, 939
Bme1390I CCNGG 2 cut(s) 11, 1821
Bme18I GGWCC 1 cut(s) 71
BmeRI GACNNNNNGTC 1 cut(s) 678
BmgT120I GGNCC 3 cut(s) 71, 204, 931
BmiI GGNNCC 9 cut(s) 196, 236, 369, 402, 1215, 1404, 1565, 2112, 2222
BmrFI CCNGG 2 cut(s) 11, 1821
BmsI GCATC 5 cut(s) 447, 508, 1303, 1636, 2265
BpiI GAAGAC 5 cut(s) 21, 221, 753, 1953, 2131
BpmI CTGGAG 2 cut(s) 1926, 2125
Bpu10I CCTNAGC 3 cut(s) 615, 1956, 2216
Bpu1102I GCTNAGC 1 cut(s) 1605
Bpu14I TTCGAA 1 cut(s) 1136
BpuEI CTTGAG 1 cut(s) 11
BsaAI YACGTR 2 cut(s) 2027, 2234
BsaI GGTCTC 1 cut(s) 1054
BsaJI CCNNGG 3 cut(s) 578, 1861, 2032
BsaWI WCCGGW 2 cut(s) 73, 403
Bsc4I CCNNNNNNNGG 1 cut(s) 1070
Bse1I ACTGG 5 cut(s) 73, 227, 1108, 1323, 1650
Bse21I CCTNAGG 1 cut(s) 363
Bse3DI GCAATG 2 cut(s) 829, 1770
BseBI CCWGG 2 cut(s) 11, 1821
BseDI CCNNGG 3 cut(s) 578, 1861, 2032
BseGI GGATG 4 cut(s) 846, 991, 1651, 2280
BseLI CCNNNNNNNGG 1 cut(s) 1070
BseMI GCAATG 2 cut(s) 829, 1770
BseMII CTCAG 5 cut(s) 354, 629, 1596, 1947, 2281
BseNI ACTGG 5 cut(s) 73, 227, 1108, 1323, 1650
BseRI GAGGAG 7 cut(s) 462, 839, 879, 886, 1760, 1897, 1973
BseSI GKGCMC 1 cut(s) 1657
BseXI GCAGC 4 cut(s) 511, 776, 871, 949
BseYI CCCAGC 1 cut(s) 2153
BshFI GGCC 4 cut(s) 205, 933, 1860, 1888
BshNI GGYRCC 3 cut(s) 400, 1563, 2220
BsiHKAI GWGCWC 2 cut(s) 102, 1657
BsiSI CCGG 3 cut(s) 55, 74, 404
BslFI GGGAC 2 cut(s) 1186, 2159
BslI CCNNNNNNNGG 1 cut(s) 1070
BsmAI GTCTC 2 cut(s) 647, 1054
BsmFI GGGAC 2 cut(s) 1186, 2159
BsmI GAATGC 2 cut(s) 1102, 1901
BsnI GGCC 4 cut(s) 205, 933, 1860, 1888
Bso31I GGTCTC 1 cut(s) 1054
Bsp119I TTCGAA 1 cut(s) 1136
Bsp1286I GDGCHC 2 cut(s) 102, 1657
Bsp1407I TGTACA 1 cut(s) 1259
Bsp1720I GCTNAGC 1 cut(s) 1605
BspACI CCGC 4 cut(s) 521, 527, 894, 1753
BspANI GGCC 4 cut(s) 205, 933, 1860, 1888
BspCNI CTCAG 5 cut(s) 355, 628, 1597, 1948, 2280
BspHI TCATGA 1 cut(s) 85
BspLI GGNNCC 9 cut(s) 196, 236, 369, 402, 1215, 1404, 1565, 2112, 2222
BspMI ACCTGC 1 cut(s) 668
BspPI GGATC 9 cut(s) 68, 627, 776, 1247, 1706, 1744, 1961, 2105, 2118
BspT104I TTCGAA 1 cut(s) 1136
BspT107I GGYRCC 3 cut(s) 400, 1563, 2220
BspTI CTTAAG 1 cut(s) 1558
BspTNI GGTCTC 1 cut(s) 1054
BsrDI GCAATG 2 cut(s) 829, 1770
BsrGI TGTACA 1 cut(s) 1259
BsrI ACTGG 5 cut(s) 73, 227, 1108, 1323, 1650
BssECI CCNNGG 3 cut(s) 578, 1861, 2032
BssT1I CCWWGG 3 cut(s) 578, 1861, 2032
Bst2UI CCWGG 2 cut(s) 11, 1821
Bst4CI ACNGT 4 cut(s) 641, 1208, 1264, 2053
Bst6I CTCTTC 1 cut(s) 1669
BstAFI CTTAAG 1 cut(s) 1558
BstAUI TGTACA 1 cut(s) 1259
BstBAI YACGTR 2 cut(s) 2027, 2234
BstBI TTCGAA 1 cut(s) 1136
BstC8I GCNNGC 4 cut(s) 513, 935, 1551, 2280
BstDEI CTNAG 9 cut(s) 363, 593, 615, 857, 1605, 1956, 2003, 2216, 2267
BstF5I GGATG 4 cut(s) 846, 991, 1651, 2280
BstH2I RGCGCY 1 cut(s) 1876
BstHHI GCGC 1 cut(s) 1875
BstMAI GTCTC 2 cut(s) 647, 1054
BstMWI GCNNNNNNNGC 5 cut(s) 512, 521, 893, 1480, 2198
BstNI CCWGG 2 cut(s) 11, 1821
BstNSI RCATGY 2 cut(s) 106, 1642
BstSCI CCNGG 2 cut(s) 9, 1819
BstSFI CTRYAG 1 cut(s) 187
BstSLI GKGCMC 1 cut(s) 1657
BstSNI TACGTA 2 cut(s) 2027, 2234
BstV1I GCAGC 4 cut(s) 511, 776, 871, 949
BstV2I GAAGAC 5 cut(s) 21, 221, 753, 1953, 2131
BstX2I RGATCY 6 cut(s) 60, 271, 619, 1749, 2110, 2285
BstYI RGATCY 6 cut(s) 60, 271, 619, 1749, 2110, 2285
Bsu36I CCTNAGG 1 cut(s) 363
BsuI GTATCC 1 cut(s) 986
BsuRI GGCC 4 cut(s) 205, 933, 1860, 1888
BtgZI GCGATG 1 cut(s) 876
BtsCI GGATG 4 cut(s) 846, 991, 1651, 2280
BtsI GCAGTG 1 cut(s) 1502
BtsIMutI CAGTG 4 cut(s) 66, 1502, 1657, 2058
BveI ACCTGC 1 cut(s) 668
Cac8I GCNNGC 4 cut(s) 513, 935, 1551, 2280
CaiI CAGNNNCTG 3 cut(s) 112, 622, 1504
CciI TCATGA 1 cut(s) 85
CfoI GCGC 1 cut(s) 1875
Cfr13I GGNCC 3 cut(s) 71, 204, 931
Csp6I GTAC 1 cut(s) 1260
CspCI CAANNNNNGTGG 2 cut(s) 1765, 1800
CviAII CATG 9 cut(s) 86, 103, 373, 919, 970, 998, 1257, 1639, 2210
CviQI GTAC 1 cut(s) 1260
DdeI CTNAG 9 cut(s) 363, 593, 615, 857, 1605, 1956, 2003, 2216, 2267
DraI TTTAAA 1 cut(s) 1422
DriI GACNNNNNGTC 1 cut(s) 678
Eam1104I CTCTTC 1 cut(s) 1669
Eam1105I GACNNNNNGTC 1 cut(s) 678
EarI CTCTTC 1 cut(s) 1669
Eco105I TACGTA 2 cut(s) 2027, 2234
Eco130I CCWWGG 3 cut(s) 578, 1861, 2032
Eco147I AGGCCT 1 cut(s) 1888
Eco31I GGTCTC 1 cut(s) 1054
Eco47I GGWCC 1 cut(s) 71
Eco57I CTGAAG 1 cut(s) 1861
Eco81I CCTNAGG 1 cut(s) 363
EcoO109I RGGNCCY 1 cut(s) 204
EcoRI GAATTC 1 cut(s) 264
EcoRII CCWGG 2 cut(s) 9, 1819
EcoT14I CCWWGG 3 cut(s) 578, 1861, 2032
ErhI CCWWGG 3 cut(s) 578, 1861, 2032
FaeI CATG 9 cut(s) 89, 106, 376, 922, 973, 1001, 1260, 1642, 2213
FalI AAGNNNNNCTT 4 cut(s) 555, 587, 1444, 1476
FaqI GGGAC 2 cut(s) 1186, 2159
FatI CATG 9 cut(s) 85, 102, 372, 918, 969, 997, 1256, 1638, 2209
FauI CCCGC 1 cut(s) 901
FblI GTMKAC 1 cut(s) 1922
Fnu4HI GCNGC 5 cut(s) 522, 525, 765, 885, 938
FokI GGATG 4 cut(s) 853, 998, 1658, 2287
Fsp4HI GCNGC 5 cut(s) 522, 525, 765, 885, 938
FspBI CTAG 6 cut(s) 81, 579, 957, 1862, 1890, 2075
GlaI GCGC 1 cut(s) 1874
GluI GCNGC 5 cut(s) 522, 525, 765, 885, 938
GsaI CCCAGC 1 cut(s) 2157
GsuI CTGGAG 2 cut(s) 1926, 2125
HaeII RGCGCY 1 cut(s) 1876
HaeIII GGCC 4 cut(s) 205, 933, 1860, 1888
HapII CCGG 3 cut(s) 55, 74, 404
HhaI GCGC 1 cut(s) 1875
Hin1II CATG 9 cut(s) 89, 106, 376, 922, 973, 1001, 1260, 1642, 2213
Hin6I GCGC 1 cut(s) 1873
HinP1I GCGC 1 cut(s) 1873
HincII GTYRAC 2 cut(s) 637, 1204
HindII GTYRAC 2 cut(s) 637, 1204
HindIII AAGCTT 1 cut(s) 504
HinfI GANTC 7 cut(s) 217, 442, 850, 1089, 1138, 1345, 2044
HpaII CCGG 3 cut(s) 55, 74, 404
Hpy188I TCNGA 7 cut(s) 502, 624, 661, 1213, 2049, 2183, 2290
HpyAV CCTTC 8 cut(s) 217, 289, 1143, 1330, 1422, 2001, 2034, 2256
HpyCH4III ACNGT 4 cut(s) 641, 1208, 1264, 2053
HpyCH4IV ACGT 4 cut(s) 1791, 2026, 2169, 2233
HpyF10VI GCNNNNNNNGC 5 cut(s) 512, 521, 893, 1480, 2198
HpyF3I CTNAG 9 cut(s) 363, 593, 615, 857, 1605, 1956, 2003, 2216, 2267
HpySE526I ACGT 4 cut(s) 1791, 2026, 2169, 2233
Hsp92II CATG 9 cut(s) 89, 106, 376, 922, 973, 1001, 1260, 1642, 2213
HspAI GCGC 1 cut(s) 1873
LmnI GCTCC 8 cut(s) 97, 373, 826, 892, 969, 1213, 1512, 1665
Lsp1109I GCAGC 4 cut(s) 511, 776, 871, 949
LweI GCATC 5 cut(s) 447, 508, 1303, 1636, 2265
MaeI CTAG 6 cut(s) 81, 579, 957, 1862, 1890, 2075
MaeII ACGT 4 cut(s) 1791, 2026, 2169, 2233
MaeIII GTNAC 6 cut(s) 76, 155, 641, 670, 1936, 2060
MfeI CAATTG 1 cut(s) 1442
MflI RGATCY 6 cut(s) 60, 271, 619, 1749, 2110, 2285
MhlI GDGCHC 2 cut(s) 102, 1657
MluCI AATT 8 cut(s) 264, 378, 708, 1384, 1442, 1514, 1687, 1916
MlyI GAGTC 1 cut(s) 211
MmeI TCCRAC 1 cut(s) 1430
MseI TTAA 6 cut(s) 438, 630, 1421, 1476, 1559, 1616
MslI CAYNNNNRTG 4 cut(s) 406, 516, 839, 1660
MspCI CTTAAG 1 cut(s) 1558
MspI CCGG 3 cut(s) 55, 74, 404
MspR9I CCNGG 2 cut(s) 11, 1821
MunI CAATTG 1 cut(s) 1442
Mva1269I GAATGC 2 cut(s) 1102, 1901
MvaI CCWGG 2 cut(s) 11, 1821
MwoI GCNNNNNNNGC 5 cut(s) 512, 521, 893, 1480, 2198
NlaIII CATG 9 cut(s) 89, 106, 376, 922, 973, 1001, 1260, 1642, 2213
NlaIV GGNNCC 9 cut(s) 196, 236, 369, 402, 1215, 1404, 1565, 2112, 2222
NmuCI GTSAC 4 cut(s) 76, 155, 670, 2060
NspI RCATGY 2 cut(s) 106, 1642
NspV TTCGAA 1 cut(s) 1136
PagI TCATGA 1 cut(s) 85
PceI AGGCCT 1 cut(s) 1888
PctI GAATGC 2 cut(s) 1102, 1901
PfeI GAWTC 6 cut(s) 442, 850, 1089, 1138, 1345, 2044
PkrI GCNGC 5 cut(s) 523, 526, 766, 886, 939
PleI GAGTC 1 cut(s) 211
PpsI GAGTC 1 cut(s) 211
Ppu21I YACGTR 2 cut(s) 2027, 2234
Psp6I CCWGG 2 cut(s) 9, 1819
PspFI CCCAGC 1 cut(s) 2153
PspGI CCWGG 2 cut(s) 9, 1819
PspN4I GGNNCC 9 cut(s) 196, 236, 369, 402, 1215, 1404, 1565, 2112, 2222
PspPI GGNCC 3 cut(s) 71, 204, 931
PstNI CAGNNNCTG 3 cut(s) 112, 622, 1504
PsuI RGATCY 6 cut(s) 60, 271, 619, 1749, 2110, 2285
RsaI GTAC 1 cut(s) 1261
RsaNI GTAC 1 cut(s) 1260
RseI CAYNNNNRTG 4 cut(s) 406, 516, 839, 1660
SaqAI TTAA 6 cut(s) 438, 630, 1421, 1476, 1559, 1616
SatI GCNGC 5 cut(s) 522, 525, 765, 885, 938
Sau96I GGNCC 3 cut(s) 71, 204, 931
SchI GAGTC 1 cut(s) 211
ScrFI CCNGG 2 cut(s) 11, 1821
SduI GDGCHC 2 cut(s) 102, 1657
SfaNI GCATC 5 cut(s) 447, 508, 1303, 1636, 2265
SfcI CTRYAG 1 cut(s) 187
SfuI TTCGAA 1 cut(s) 1136
SinI GGWCC 1 cut(s) 71
SmiMI CAYNNNNRTG 4 cut(s) 406, 516, 839, 1660
SmlI CTYRAG 2 cut(s) 26, 1558
SmoI CTYRAG 2 cut(s) 26, 1558
SnaBI TACGTA 2 cut(s) 2027, 2234
SpeI ACTAGT 1 cut(s) 80
Sse9I AATT 8 cut(s) 264, 378, 708, 1384, 1442, 1514, 1687, 1916
SseBI AGGCCT 1 cut(s) 1888
SsiI CCGC 4 cut(s) 521, 527, 894, 1753
SspI AATATT 3 cut(s) 1024, 1493, 1579
SspMI CTAG 6 cut(s) 81, 579, 957, 1862, 1890, 2075
StuI AGGCCT 1 cut(s) 1888
StyD4I CCNGG 2 cut(s) 9, 1819
StyI CCWWGG 3 cut(s) 578, 1861, 2032
TaaI ACNGT 4 cut(s) 641, 1208, 1264, 2053
TaiI ACGT 4 cut(s) 1794, 2029, 2172, 2236
TaqI TCGA 5 cut(s) 427, 445, 1136, 1362, 2238
TasI AATT 8 cut(s) 264, 378, 708, 1384, 1442, 1514, 1687, 1916
TatI WGTACW 1 cut(s) 1259
TauI GCSGC 1 cut(s) 524
TfiI GAWTC 6 cut(s) 442, 850, 1089, 1138, 1345, 2044
Tru1I TTAA 6 cut(s) 438, 630, 1421, 1476, 1559, 1616
Tru9I TTAA 6 cut(s) 438, 630, 1421, 1476, 1559, 1616
TscAI CASTG 4 cut(s) 73, 1509, 1657, 2058
TseFI GTSAC 4 cut(s) 76, 155, 670, 2060
TseI GCWGC 4 cut(s) 524, 764, 884, 937
Tsp45I GTSAC 4 cut(s) 76, 155, 670, 2060
TspDTI ATGAA 6 cut(s) 343, 759, 1242, 1455, 1894, 2238
TspGWI ACGGA 1 cut(s) 1959
TspRI CASTG 4 cut(s) 73, 1509, 1657, 2058
Vha464I CTTAAG 1 cut(s) 1558
VneI GTGCAC 1 cut(s) 1653
VpaK11BI GGWCC 1 cut(s) 71
XapI RAATTY 3 cut(s) 264, 708, 1384
XceI RCATGY 2 cut(s) 106, 1642
XcmI CCANNNNNNNNNTGG 2 cut(s) 228, 1075
XmaJI CCTAGG 2 cut(s) 578, 1861
XmiI GTMKAC 1 cut(s) 1922
XspI CTAG 6 cut(s) 81, 579, 957, 1862, 1890, 2075
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.