Rh6AG243200

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
Physical Location & Seq
Reverse (-)
43202320 .. 43202548
229 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG243200.1

Sequence Viewer

Length: 229 bp
ATGTTGAAGGATATGCTAAACGAGAGACGCGTTTCCCCTGAGACATGCCGAGGAGATTTCCTTGATAATCTCGTCGTTGACATGGAAAAGGAGGAGTTTATGACAGAGGATTTTGCAGTCCAATTGATATTTGGGGGCTCATTTACTAACTTTGAGTCTGTTCACCAGTATATTGGCATTATCTTTAAGTTTACTGGCGGAGCATCCTTTAGTTCTGCAGGAGTTGACT

Protein Analysis

76

Amino Acids

8.57

Weight (kDa)

4.41

Isoelectric Point (pI)

24.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0025578)

Species Orthologous Gene IDs
rosa_multiflora Rmu_sc0004211.1_g000015
rosa_roxburghii Rroxscaffold_7G00188100
rosa_samantha Rh6AG243200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 30
AciI CCGC 1 cut(s) 198
AflIII ACRYGT 1 cut(s) 28
AgsI TTSAA 1 cut(s) 7
Alw26I GTCTC 2 cut(s) 19, 35
AsuHPI GGTGA 1 cut(s) 155
BanII GRGCYC 1 cut(s) 140
BcoDI GTCTC 2 cut(s) 19, 35
BfmI CTRYAG 1 cut(s) 216
BmsI GCATC 1 cut(s) 212
BsaJI CCNNGG 1 cut(s) 49
Bse1I ACTGG 2 cut(s) 166, 199
BseDI CCNNGG 1 cut(s) 49
BseGI GGATG 1 cut(s) 203
BseMII CTCAG 1 cut(s) 30
BseNI ACTGG 2 cut(s) 166, 199
BseRI GAGGAG 2 cut(s) 66, 107
Bsh1236I CGCG 1 cut(s) 30
BsmAI GTCTC 2 cut(s) 19, 35
BsmBI CGTCTC 1 cut(s) 19
Bsp1286I GDGCHC 1 cut(s) 140
BspACI CCGC 1 cut(s) 198
BspCNI CTCAG 1 cut(s) 31
BspFNI CGCG 1 cut(s) 30
BspMAI CTGCAG 1 cut(s) 220
BsrI ACTGG 2 cut(s) 166, 199
BssECI CCNNGG 1 cut(s) 49
BstDEI CTNAG 1 cut(s) 39
BstF5I GGATG 1 cut(s) 203
BstFNI CGCG 1 cut(s) 30
BstMAI GTCTC 2 cut(s) 19, 35
BstNSI RCATGY 1 cut(s) 48
BstSFI CTRYAG 1 cut(s) 216
BstUI CGCG 1 cut(s) 30
BstXI CCANNNNNNTGG 1 cut(s) 173
BtsCI GGATG 1 cut(s) 203
CseI GACGC 1 cut(s) 36
CviAII CATG 2 cut(s) 45, 82
CviJI RGCY 1 cut(s) 138
CviKI_1 RGCY 1 cut(s) 138
DdeI CTNAG 1 cut(s) 39
EciI GGCGGA 1 cut(s) 213
Eco24I GRGCYC 1 cut(s) 140
EcoT38I GRGCYC 1 cut(s) 140
Esp3I CGTCTC 1 cut(s) 19
FaeI CATG 2 cut(s) 48, 85
FaiI YATR 5 cut(s) 14, 46, 83, 101, 171
FatI CATG 2 cut(s) 44, 81
FokI GGATG 1 cut(s) 190
FriOI GRGCYC 1 cut(s) 140
HgaI GACGC 1 cut(s) 36
Hin1II CATG 2 cut(s) 48, 85
HincII GTYRAC 2 cut(s) 79, 226
HindII GTYRAC 2 cut(s) 79, 226
HinfI GANTC 1 cut(s) 155
HphI GGTGA 1 cut(s) 155
Hpy166II GTNNAC 4 cut(s) 79, 163, 192, 226
Hpy8I GTNNAC 4 cut(s) 79, 163, 192, 226
Hpy99I CGWCG 1 cut(s) 77
HpyCH4V TGCA 2 cut(s) 116, 218
HpyF3I CTNAG 1 cut(s) 39
Hsp92II CATG 2 cut(s) 48, 85
LmnI GCTCC 1 cut(s) 200
LpnPI CCDG 4 cut(s) 51, 179, 180, 204
LweI GCATC 1 cut(s) 212
MfeI CAATTG 1 cut(s) 122
MhlI GDGCHC 1 cut(s) 140
MluCI AATT 1 cut(s) 122
MluI ACGCGT 1 cut(s) 28
MlyI GAGTC 1 cut(s) 164
MnlI CCTC 3 cut(s) 44, 85, 100
MseI TTAA 1 cut(s) 186
MunI CAATTG 1 cut(s) 122
MvnI CGCG 1 cut(s) 30
NlaIII CATG 2 cut(s) 48, 85
NmeAIII GCCGAG 1 cut(s) 74
NspI RCATGY 1 cut(s) 48
PcsI WCGNNNNNNNCGW 1 cut(s) 27
PleI GAGTC 1 cut(s) 163
PpsI GAGTC 1 cut(s) 163
PstI CTGCAG 1 cut(s) 220
SaqAI TTAA 1 cut(s) 186
SchI GAGTC 1 cut(s) 164
SduI GDGCHC 1 cut(s) 140
SfaNI GCATC 1 cut(s) 212
SfcI CTRYAG 1 cut(s) 216
Sse9I AATT 1 cut(s) 122
SsiI CCGC 1 cut(s) 198
TasI AATT 1 cut(s) 122
Tru1I TTAA 1 cut(s) 186
Tru9I TTAA 1 cut(s) 186
XceI RCATGY 1 cut(s) 48
XcmI CCANNNNNNNNNTGG 1 cut(s) 128
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.