Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6A

Orthogroup ID

OG0003900

Physical Location & Seq

Genomic Coordinates Forward (+)

62219230 .. 62223395

Gene Structure 4166 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6AG431900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1956 bp

ATGGGGGCGGTTTGCTCGGCTGGGTTTAGTGATGAAGGTGCTAAGAATTTGGGGTTTTCCGGGAAGCTCAAGTCGAGTGTGAATAAGATGAAAGATAATTTTTCATTCTCCAATGATATTGACGCCCTGAGAACGCCGCACAAGTACGATTCCGGCGAGCTGCGATCGTCGTTTTCGAGCGAGTTGAAGCCGTCAACTCCTGCTCGGAATGGAGCCGCCAAGATTTCGCAGAGGAACTCATTTATAGGCAGAGCTGGAACTGCAGGCCTGGAGAAGGCAGTAGGAGTTTTGGATACACTAGGCAGTAGCGTGTCGAATTTGCAAAGCAATAGCGGATTTCTTACTGGGGGTTCTAGAGGCAATAGAATATCTATACTATCATTTGAAGTAGCTAACACAATCGCCAAGGGCGCAAACTTGTTGCAATCGCTTTCCGAAAAGAATATCCAGTTCCTCAAGGGAGAGGTTCTGCATTCTCAAGGTGTACAAAACTTGGTGTCCAAAGATATGAGGGAGTTGCTAAGTATTGCTGCTGCTGACAAAAGGGAAGAACTTGATCTTTTCTCACGGGAAGTAATTAGGTTCGGCAACCAGTGTAAAGACCCACAATGGCATAACCTGAGTCGATATTTCTCAAGATTAGATTCTGATGATCCAAGTCACAAACAGCTAAGATCAGAAGCCGAAATGACAATGCAGGAATTGACCACTCTTGGTCAGCATACTTCTGAATTATACCATGAGTTGAGTGCTTTGGACAGATTTGAACAAGATTACAAGAGAAAGCTCGAGGAAGCTAAGGCCTTGCATCTCCCTCTTAGAGGAGAAAGTCTGACAATGTTACAAAGTGAATTAAAACAACAAAGAAAGCTTGTGAGGACCTTGAAAAAGAAATCTCTTTGGGCCAAAAATTTAGATGAGATAGTGGAGAAACTTGTAGATATTGTTGCTTATACACATCAAGCAATCTCGGAAGCATTTGGTGATAATGGTGTAACTCTTGTGAAAGGGGAGAAGGGTAAAAATCCTCAAAGACTAGGCGCAGCTGGTCTTGCATTACACTATGCCAATATGATAAACCAGATAGATAACATTGCGTCTCGACCAACCTCTCTTCCCCCAAATACAAGGGACAACTTATATCATGGATTGCCAGATAGTGTTAAGAAAGCTTTACGATCTCGATTGCAAACTCTTGATGCCAAGGAAGAGCTCATGGTTTCTCAGGTCAAAGCTGAAATGGAAAAGACTCTCCACTGGCTTGTTCCTGTTGCCTCAAATACGAATAAAGCTCATCAAGGTTTTGGGTGGGTGGGAGAATGGGCAAACTCTGGGTCAGTCAAGCCGCTCACTTTCTCTGAATTTCATTTAGATGGACAAGATGCATCATTTTATATCAATGTACATGATTATTTATTTATTTTTTTACTGAAAAGATTTCTGATGTTAGCTTTCCCATTTGACAGTACTGAGTTTGGGAAAAATACATCCTCGGAAAGCAACTTGATCCGCCTCCAGACACTCTATCACGCAGATAAGCAAAAGACAGATGCTTACATCCTTGAATTAGTGACGTGGCTTCACCAGCTAATCAACCTTGTAAGACATTGTGATCATGGTTTGAAGCCCTTGCCTATACGGTCTCCAACTCGTAGGGGACTGGACTTGCACTCCAAGATGCAGCGAATGCAATCCATGGATTATAGTACAAACAAGACCCGAAGAATACAGCTTTCAGAAGAAGATCGAAATTTGCTGGATGACGTTATTGGGAGGATGAAAAGGGTTCCTGGAATTAGTAAGAGTCAGGAATTTGCTATGTCCAAGAAGAGAGGAACTAAAGCTTGGGCTTTGAGCAAGAGCACTGGAAGCTCCCCGCCGAGGGAACTAAATGCAAGGGGAAACTTGGATCAGCCAAAGGCTAATCCCTTGGATGTCATTGATGGGTTAGGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF3475 DUF668

Protein Analysis

651

Amino Acids

72.77

Weight (kDa)

9.33

Isoelectric Point (pI)

43.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF3475	PF11961	125 - 181	5e-24	Domain of unknown function (DUF3475)
DUF668	PF05003	345 - 430	3.1e-31	Protein of unknown function (DUF668)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003900)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30755 AT1G30755 AT1G30755 AT1G30755 AT1G30755 AT1G30755
fragaria_vesca	FvH4_2g38360 FvH4_2g38360 FvH4_2g38360 FvH4_2g38360 FvH4_2g38360 FvH4_2g38360 FvH4_2g38360 FvH4_2g38360 FvH4_2g38360 FvH4_2g38360 FvH4_2g38360
malus_domestica	MD08G1012300.v1.1 MD15G1011300.v1.1
prunus_persica	Prupe.1G364500_v2.0.a1 Prupe.1G364500_v2.0.a1 Prupe.1G364500_v2.0.a1
pyrus_communis	pycom08g01070 pycom15g01010
rosa_chinensis	RchiOBHm_Chr6g0302951
rosa_laevigata	RLG00000011122
rosa_multiflora	Rmu_ssc0000460.1_g000021
rosa_roxburghii	Rroxscaffold_7G00165140
rosa_rugosa	Rorug06G0318300
rosa_samantha	Rh6AG431900 Rh6BG470700 Rh6CG444400 Rh6DG431100
rosa_wichuraiana	Rw6G037440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	1348
AciI	CCGC	7 cut(s)	8, 137, 216, 333, 1346, 1510, 1877
AclWI	GGATC	3 cut(s)	647, 1501, 1917
AcsI	RAATTY	6 cut(s)	46, 316, 910, 1361, 1750, 1811
AcyI	GRCGYC	1 cut(s)	123
AfaI	GTAC	5 cut(s)	146, 486, 1404, 1468, 1708
AfiI	CCNNNNNNNGG	4 cut(s)	274, 821, 1881, 1882
AgsI	TTSAA	6 cut(s)	187, 386, 767, 886, 1565, 1624
AjiI	CACGTC	1 cut(s)	1575
AjnI	CCWGG	2 cut(s)	267, 1789
AjuI	GAANNNNNNNTTGG	2 cut(s)	1828, 1860
Alw21I	GWGCWC	2 cut(s)	1215, 1865
Alw26I	GTCTC	2 cut(s)	1104, 1647
AlwI	GGATC	3 cut(s)	647, 1501, 1917
Ama87I	CYCGRG	1 cut(s)	788
AoxI	GGCC	3 cut(s)	265, 801, 903
ApeKI	GCWGC	5 cut(s)	160, 530, 533, 1043, 1681
ApoI	RAATTY	6 cut(s)	46, 316, 910, 1361, 1750, 1811
ArsI	GACNNNNNNTTYG	2 cut(s)	1319, 1351
AspLEI	GCGC	2 cut(s)	413, 1043
AspS9I	GGNCC	2 cut(s)	879, 903
AsuC2I	CCSGG	1 cut(s)	61
AsuHPI	GGTGA	2 cut(s)	995, 1574
AvaI	CYCGRG	1 cut(s)	788
AvaII	GGWCC	1 cut(s)	879
BanII	GRGCYC	1 cut(s)	1215
Bbv12I	GWGCWC	2 cut(s)	1215, 1865
BbvI	GCAGC	5 cut(s)	147, 517, 520, 1055, 1693
BccI	CCATC	2 cut(s)	1367, 1937
BceAI	ACGGC	1 cut(s)	175
BciT130I	CCWGG	2 cut(s)	269, 1791
BciVI	GTATCC	1 cut(s)	286
BclI	TGATCA	1 cut(s)	1612
BcnI	CCSGG	1 cut(s)	61
BcoDI	GTCTC	2 cut(s)	1104, 1647
BfaI	CTAG	3 cut(s)	299, 354, 1037
BfmI	CTRYAG	1 cut(s)	261
BfuI	GTATCC	1 cut(s)	286
BisI	GCNGC	8 cut(s)	137, 161, 216, 531, 534, 1044, 1346, 1682
BlsI	GCNGC	8 cut(s)	138, 162, 217, 532, 535, 1045, 1347, 1683
BmcAI	AGTACT	1 cut(s)	1468
Bme1390I	CCNGG	3 cut(s)	61, 269, 1791
Bme18I	GGWCC	1 cut(s)	879
BmeT110I	CYCGRG	1 cut(s)	788
BmgBI	CACGTC	1 cut(s)	1575
BmgT120I	GGNCC	2 cut(s)	879, 903
BmiI	GGNNCC	2 cut(s)	214, 1788
BmrFI	CCNGG	3 cut(s)	61, 269, 1791
BmrI	ACTGGG	1 cut(s)	354
BmsI	GCATC	6 cut(s)	817, 1189, 1372, 1394, 1540, 1668
BmuI	ACTGGG	1 cut(s)	354
BpmI	CTGGAG	2 cut(s)	290, 1499
Bpu10I	CCTNAGC	1 cut(s)	798
BpuEI	CTTGAG	4 cut(s)	53, 440, 462, 619
BpuMI	CCSGG	1 cut(s)	61
BsaHI	GRCGYC	1 cut(s)	123
BsaI	GGTCTC	1 cut(s)	1647
BsaJI	CCNNGG	6 cut(s)	405, 1203, 1491, 1695, 1880, 1929
BsaXI	ACNNNNNCTCC	2 cut(s)	1655, 1685
Bsc4I	CCNNNNNNNGG	4 cut(s)	274, 821, 1881, 1882
Bse1I	ACTGG	6 cut(s)	349, 448, 592, 1262, 1665, 1870
Bse3DI	GCAATG	1 cut(s)	1092
BseBI	CCWGG	2 cut(s)	269, 1791
BseDI	CCNNGG	6 cut(s)	405, 1203, 1491, 1695, 1880, 1929
BseGI	GGATG	5 cut(s)	1487, 1557, 1765, 1782, 1939
BseLI	CCNNNNNNNGG	4 cut(s)	274, 821, 1881, 1882
BseMI	GCAATG	1 cut(s)	1092
BseMII	CTCAG	4 cut(s)	119, 611, 1238, 1461
BseNI	ACTGG	6 cut(s)	349, 448, 592, 1262, 1665, 1870
BseRI	GAGGAG	1 cut(s)	837
BseXI	GCAGC	5 cut(s)	147, 517, 520, 1055, 1693
BseYI	CCCAGC	1 cut(s)	20
Bsh1285I	CGRYCG	1 cut(s)	167
BshFI	GGCC	3 cut(s)	267, 803, 905
BsiEI	CGRYCG	1 cut(s)	167
BsiHKAI	GWGCWC	2 cut(s)	1215, 1865
BsiHKCI	CYCGRG	1 cut(s)	788
BsiSI	CCGG	2 cut(s)	60, 153
BslFI	GGGAC	2 cut(s)	1145, 1671
BslI	CCNNNNNNNGG	4 cut(s)	274, 821, 1881, 1882
BsmAI	GTCTC	2 cut(s)	1104, 1647
BsmBI	CGTCTC	1 cut(s)	1104
BsmFI	GGGAC	2 cut(s)	1145, 1671
BsmI	GAATGC	2 cut(s)	472, 1692
BsnI	GGCC	3 cut(s)	267, 803, 905
Bso31I	GGTCTC	1 cut(s)	1647
BsoBI	CYCGRG	1 cut(s)	788
Bsp1286I	GDGCHC	2 cut(s)	1215, 1865
Bsp1407I	TGTACA	2 cut(s)	484, 1402
Bsp143I	GATC	9 cut(s)	164, 556, 652, 674, 1178, 1506, 1612, 1744, 1909
Bsp19I	CCATGG	1 cut(s)	1695
BspACI	CCGC	7 cut(s)	8, 137, 216, 333, 1346, 1510, 1877
BspANI	GGCC	3 cut(s)	267, 803, 905
BspCNI	CTCAG	4 cut(s)	120, 612, 1237, 1462
BspLI	GGNNCC	2 cut(s)	214, 1788
BspMAI	CTGCAG	1 cut(s)	265
BspPI	GGATC	3 cut(s)	647, 1501, 1917
BspQI	GCTCTTC	1 cut(s)	1203
BspTNI	GGTCTC	1 cut(s)	1647
BsrBI	CCGCTC	1 cut(s)	1348
BsrDI	GCAATG	1 cut(s)	1092
BsrGI	TGTACA	2 cut(s)	484, 1402
BsrI	ACTGG	6 cut(s)	349, 448, 592, 1262, 1665, 1870
BssECI	CCNNGG	6 cut(s)	405, 1203, 1491, 1695, 1880, 1929
BssMI	GATC	9 cut(s)	164, 556, 652, 674, 1178, 1506, 1612, 1744, 1909
BssNI	GRCGYC	1 cut(s)	123
BssT1I	CCWWGG	4 cut(s)	405, 1203, 1695, 1929
Bst2UI	CCWGG	2 cut(s)	269, 1791
Bst4CI	ACNGT	2 cut(s)	1466, 1641
Bst6I	CTCTTC	3 cut(s)	1119, 1203, 1823
BstACI	GRCGYC	1 cut(s)	123
BstAPI	GCANNNNNTGC	1 cut(s)	1687
BstAUI	TGTACA	2 cut(s)	484, 1402
BstC8I	GCNNGC	2 cut(s)	158, 265
BstDEI	CTNAG	9 cut(s)	42, 128, 521, 620, 671, 798, 818, 1224, 1470
BstDSI	CCRYGG	1 cut(s)	1695
BstENI	CCTNNNNNAGG	2 cut(s)	272, 819
BstF5I	GGATG	5 cut(s)	1487, 1557, 1765, 1782, 1939
BstHHI	GCGC	2 cut(s)	413, 1043
BstKTI	GATC	9 cut(s)	167, 559, 655, 677, 1181, 1509, 1615, 1747, 1912
BstMAI	GTCTC	2 cut(s)	1104, 1647
BstMBI	GATC	9 cut(s)	164, 556, 652, 674, 1178, 1506, 1612, 1744, 1909
BstMCI	CGRYCG	1 cut(s)	167
BstMWI	GCNNNNNNNGC	6 cut(s)	260, 410, 1052, 1585, 1687, 1869
BstNI	CCWGG	2 cut(s)	269, 1791
BstSCI	CCNGG	3 cut(s)	59, 267, 1789
BstSFI	CTRYAG	1 cut(s)	261
BstV1I	GCAGC	5 cut(s)	147, 517, 520, 1055, 1693
BsuI	GTATCC	1 cut(s)	286
BsuRI	GGCC	3 cut(s)	267, 803, 905
BtgI	CCRYGG	1 cut(s)	1695
BtrI	CACGTC	1 cut(s)	1575
BtsCI	GGATG	5 cut(s)	1487, 1557, 1765, 1782, 1939
BtsIMutI	CAGTG	3 cut(s)	599, 1255, 1863
Cac8I	GCNNGC	2 cut(s)	158, 265
CfoI	GCGC	2 cut(s)	413, 1043
Cfr13I	GGNCC	2 cut(s)	879, 903
CseI	GACGC	2 cut(s)	131, 1086
Csp6I	GTAC	5 cut(s)	145, 485, 1403, 1467, 1707
CviAII	CATG	6 cut(s)	740, 1145, 1216, 1406, 1616, 1696
CviQI	GTAC	5 cut(s)	145, 485, 1403, 1467, 1707
DdeI	CTNAG	9 cut(s)	42, 128, 521, 620, 671, 798, 818, 1224, 1470
DpnI	GATC	9 cut(s)	166, 558, 654, 676, 1180, 1508, 1614, 1746, 1911
DpnII	GATC	9 cut(s)	164, 556, 652, 674, 1178, 1506, 1612, 1744, 1909
Eam1104I	CTCTTC	3 cut(s)	1119, 1203, 1823
EarI	CTCTTC	3 cut(s)	1119, 1203, 1823
EciI	GGCGGA	1 cut(s)	1499
Ecl136II	GAGCTC	1 cut(s)	1213
Eco130I	CCWWGG	4 cut(s)	405, 1203, 1695, 1929
Eco147I	AGGCCT	2 cut(s)	267, 803
Eco24I	GRGCYC	1 cut(s)	1215
Eco31I	GGTCTC	1 cut(s)	1647
Eco47I	GGWCC	1 cut(s)	879
Eco53kI	GAGCTC	1 cut(s)	1213
Eco88I	CYCGRG	1 cut(s)	788
EcoICRI	GAGCTC	1 cut(s)	1213
EcoNI	CCTNNNNNAGG	2 cut(s)	272, 819
EcoO109I	RGGNCCY	1 cut(s)	879
EcoRII	CCWGG	2 cut(s)	267, 1789
EcoT14I	CCWWGG	4 cut(s)	405, 1203, 1695, 1929
EcoT22I	ATGCAT	1 cut(s)	1387
EcoT38I	GRGCYC	1 cut(s)	1215
ErhI	CCWWGG	4 cut(s)	405, 1203, 1695, 1929
Esp3I	CGTCTC	1 cut(s)	1104
FaeI	CATG	6 cut(s)	743, 1148, 1219, 1409, 1619, 1699
FaqI	GGGAC	2 cut(s)	1145, 1671
FatI	CATG	6 cut(s)	739, 1144, 1215, 1405, 1615, 1695
FauI	CCCGC	1 cut(s)	1884
FbaI	TGATCA	1 cut(s)	1612
Fnu4HI	GCNGC	8 cut(s)	137, 161, 216, 531, 534, 1044, 1346, 1682
FokI	GGATG	5 cut(s)	1474, 1544, 1772, 1789, 1946
FriOI	GRGCYC	1 cut(s)	1215
Fsp4HI	GCNGC	8 cut(s)	137, 161, 216, 531, 534, 1044, 1346, 1682
FspBI	CTAG	3 cut(s)	299, 354, 1037
GlaI	GCGC	2 cut(s)	412, 1042
GluI	GCNGC	8 cut(s)	137, 161, 216, 531, 534, 1044, 1346, 1682
GsaI	CCCAGC	1 cut(s)	24
GsuI	CTGGAG	2 cut(s)	290, 1499
HaeIII	GGCC	3 cut(s)	267, 803, 905
HapII	CCGG	2 cut(s)	60, 153
HgaI	GACGC	2 cut(s)	131, 1086
HhaI	GCGC	2 cut(s)	413, 1043
Hin1I	GRCGYC	1 cut(s)	123
Hin1II	CATG	6 cut(s)	743, 1148, 1219, 1409, 1619, 1699
Hin6I	GCGC	2 cut(s)	411, 1041
HinP1I	GCGC	2 cut(s)	411, 1041
HincII	GTYRAC	1 cut(s)	195
HindII	GTYRAC	1 cut(s)	195
HindIII	AAGCTT	3 cut(s)	869, 1170, 1842
HinfI	GANTC	5 cut(s)	149, 622, 644, 1249, 1804
HpaII	CCGG	2 cut(s)	60, 153
HphI	GGTGA	2 cut(s)	995, 1574
Hpy166II	GTNNAC	2 cut(s)	195, 485
Hpy188III	TCNNGA	7 cut(s)	354, 636, 1101, 1182, 1196, 1516, 1808
Hpy8I	GTNNAC	2 cut(s)	195, 485
Hpy99I	CGWCG	1 cut(s)	172
HpyAV	CCTTC	3 cut(s)	29, 268, 1009
HpyCH4III	ACNGT	2 cut(s)	1466, 1641
HpyCH4IV	ACGT	2 cut(s)	1574, 1764
HpyF10VI	GCNNNNNNNGC	6 cut(s)	260, 410, 1052, 1585, 1687, 1869
HpyF3I	CTNAG	9 cut(s)	42, 128, 521, 620, 671, 798, 818, 1224, 1470
HpySE526I	ACGT	2 cut(s)	1574, 1764
Hsp92I	GRCGYC	1 cut(s)	123
Hsp92II	CATG	6 cut(s)	743, 1148, 1219, 1409, 1619, 1699
HspAI	GCGC	2 cut(s)	411, 1041
Ksp22I	TGATCA	1 cut(s)	1612
Kzo9I	GATC	9 cut(s)	164, 556, 652, 674, 1178, 1506, 1612, 1744, 1909
LguI	GCTCTTC	1 cut(s)	1203
LmnI	GCTCC	2 cut(s)	212, 1877
Lsp1109I	GCAGC	5 cut(s)	147, 517, 520, 1055, 1693
LweI	GCATC	6 cut(s)	817, 1189, 1372, 1394, 1540, 1668
MaeI	CTAG	3 cut(s)	299, 354, 1037
MaeII	ACGT	2 cut(s)	1574, 1764
MaeIII	GTNAC	4 cut(s)	659, 840, 994, 1570
MalI	GATC	9 cut(s)	166, 558, 654, 676, 1180, 1508, 1614, 1746, 1911
MbiI	CCGCTC	1 cut(s)	1348
MboI	GATC	9 cut(s)	164, 556, 652, 674, 1178, 1506, 1612, 1744, 1909
MboII	GAAGA	7 cut(s)	560, 1106, 1220, 1734, 1751, 1754, 1840
MhlI	GDGCHC	2 cut(s)	1215, 1865
MlyI	GAGTC	3 cut(s)	631, 1243, 1813
MmeI	TCCRAC	1 cut(s)	1670
Mph1103I	ATGCAT	1 cut(s)	1387
MseI	TTAA	2 cut(s)	854, 1164
MslI	CAYNNNNRTG	1 cut(s)	1371
MspA1I	CMGCKG	1 cut(s)	1046
MspI	CCGG	2 cut(s)	60, 153
MspR9I	CCNGG	3 cut(s)	61, 269, 1791
Mva1269I	GAATGC	2 cut(s)	472, 1692
MvaI	CCWGG	2 cut(s)	269, 1791
MwoI	GCNNNNNNNGC	6 cut(s)	260, 410, 1052, 1585, 1687, 1869
NciI	CCSGG	1 cut(s)	61
NcoI	CCATGG	1 cut(s)	1695
NdeII	GATC	9 cut(s)	164, 556, 652, 674, 1178, 1506, 1612, 1744, 1909
NlaIII	CATG	6 cut(s)	743, 1148, 1219, 1409, 1619, 1699
NlaIV	GGNNCC	2 cut(s)	214, 1788
NmeAIII	GCCGAG	1 cut(s)	1905
NmuCI	GTSAC	2 cut(s)	659, 1570
NsiI	ATGCAT	1 cut(s)	1387
PaeR7I	CTCGAG	1 cut(s)	788
PceI	AGGCCT	2 cut(s)	267, 803
PciSI	GCTCTTC	1 cut(s)	1203
PcsI	WCGNNNNNNNCGW	2 cut(s)	153, 173
PctI	GAATGC	2 cut(s)	472, 1692
PfeI	GAWTC	2 cut(s)	149, 644
PfoI	TCCNGGA	2 cut(s)	59, 1789
PkrI	GCNGC	8 cut(s)	138, 162, 217, 532, 535, 1045, 1347, 1683
Ple19I	CGATCG	1 cut(s)	167
PleI	GAGTC	3 cut(s)	630, 1243, 1812
PpsI	GAGTC	3 cut(s)	630, 1243, 1812
PpuMI	RGGWCCY	1 cut(s)	879
Psp124BI	GAGCTC	1 cut(s)	1215
Psp5II	RGGWCCY	1 cut(s)	879
Psp6I	CCWGG	2 cut(s)	267, 1789
PspFI	CCCAGC	1 cut(s)	20
PspGI	CCWGG	2 cut(s)	267, 1789
PspN4I	GGNNCC	2 cut(s)	214, 1788
PspPI	GGNCC	2 cut(s)	879, 903
PspPPI	RGGWCCY	1 cut(s)	879
PspXI	VCTCGAGB	1 cut(s)	788
PstI	CTGCAG	1 cut(s)	265
PvuI	CGATCG	1 cut(s)	167
PvuII	CAGCTG	1 cut(s)	1046
RsaI	GTAC	5 cut(s)	146, 486, 1404, 1468, 1708
RsaNI	GTAC	5 cut(s)	145, 485, 1403, 1467, 1707
RseI	CAYNNNNRTG	1 cut(s)	1371
SacI	GAGCTC	1 cut(s)	1215
SapI	GCTCTTC	1 cut(s)	1203
SaqAI	TTAA	2 cut(s)	854, 1164
SatI	GCNGC	8 cut(s)	137, 161, 216, 531, 534, 1044, 1346, 1682
Sau3AI	GATC	9 cut(s)	164, 556, 652, 674, 1178, 1506, 1612, 1744, 1909
Sau96I	GGNCC	2 cut(s)	879, 903
ScaI	AGTACT	1 cut(s)	1468
SchI	GAGTC	3 cut(s)	631, 1243, 1813
ScrFI	CCNGG	3 cut(s)	61, 269, 1791
SduI	GDGCHC	2 cut(s)	1215, 1865
SfaNI	GCATC	6 cut(s)	817, 1189, 1372, 1394, 1540, 1668
SfcI	CTRYAG	1 cut(s)	261
Sfr274I	CTCGAG	1 cut(s)	788
SinI	GGWCC	1 cut(s)	879
SlaI	CTCGAG	1 cut(s)	788
SmiMI	CAYNNNNRTG	1 cut(s)	1371
SmlI	CTYRAG	5 cut(s)	68, 455, 477, 634, 788
SmoI	CTYRAG	5 cut(s)	68, 455, 477, 634, 788
SseBI	AGGCCT	2 cut(s)	267, 803
SsiI	CCGC	7 cut(s)	8, 137, 216, 333, 1346, 1510, 1877
SspMI	CTAG	3 cut(s)	299, 354, 1037
SstI	GAGCTC	1 cut(s)	1215
StuI	AGGCCT	2 cut(s)	267, 803
StyD4I	CCNGG	3 cut(s)	59, 267, 1789
StyI	CCWWGG	4 cut(s)	405, 1203, 1695, 1929
TaaI	ACNGT	2 cut(s)	1466, 1641
TaiI	ACGT	2 cut(s)	1577, 1767
TaqI	TCGA	8 cut(s)	74, 176, 314, 625, 789, 1102, 1183, 1747
TatI	WGTACW	4 cut(s)	484, 1402, 1466, 1706
TauI	GCSGC	3 cut(s)	139, 218, 1348
TfiI	GAWTC	2 cut(s)	149, 644
Tru1I	TTAA	2 cut(s)	854, 1164
Tru9I	TTAA	2 cut(s)	854, 1164
TscAI	CASTG	3 cut(s)	599, 1262, 1870
TseFI	GTSAC	2 cut(s)	659, 1570
TseI	GCWGC	5 cut(s)	160, 530, 533, 1043, 1681
Tsp45I	GTSAC	2 cut(s)	659, 1570
TspDTI	ATGAA	5 cut(s)	48, 93, 104, 1355, 1793
TspRI	CASTG	3 cut(s)	599, 1262, 1870
VpaK11BI	GGWCC	1 cut(s)	879
XagI	CCTNNNNNAGG	2 cut(s)	272, 819
XapI	RAATTY	6 cut(s)	46, 316, 910, 1361, 1750, 1811
XbaI	TCTAGA	1 cut(s)	353
XhoI	CTCGAG	1 cut(s)	788
XspI	CTAG	3 cut(s)	299, 354, 1037
ZrmI	AGTACT	1 cut(s)	1468
Zsp2I	ATGCAT	1 cut(s)	1387

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.