Rorug06G0318300

Protein of unknown function (DUF1138)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0001838
Physical Location & Seq
Reverse (-)
47011002 .. 47016820
5819 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0318300.1

Sequence Viewer

Length: 1998 bp
ATGAGCAAGAAAGCGAACCCCAGTGTCTTCTTAGATGTATCCATTGATGGGGCCCCGACGGAAAGAATTGTGATCGAGCTTTTTGCGGATGTTGTGCCTAAGACAGCAGAAAATTTTAGGGCTCTCTGTACAGGTGAGAAGGGCATTGGAAAGTCTACAGGCAAACCTCTTCACTACAAAGGAACGCAATTTCATCGAATTATCAAAGGATTTATGGCGCAAGGTGGTGATTTTTCAAAGGGGAACGGAACTGGCGGAGAAAGTATTTATGGAGGAAAGTTTGCAGATGAAAATTTTAAATTGAAGCATGATAGACCCGGCCTTCTGTCTATGGCAAATGGCGGTCCAAATACAAATGGGTCTCAGTTCTTTATAATTTTCAATCCTACACCACATCTTAATGGGAAACATGTTGTTTTTGGAAAGGTTACAAAGGGAATAGATGTAGTTCAGAAAATTGAGAAAGCTGGAACAGATCAAGGAAACCCTTCGCAACTGGTGAAAATTGTAGACTGTGGTGAAGTTGAGAATAGTAAAATCACCAGTGCAACAGAGAAAGAGAAAGGGAAAAAGAGGAAATCAGTGAAGATTTCATCATCTGAGGATAGTTCTGATGAGGAAGTGAGAGGAAGGCGTAAAAAATCTCTGAAGGAAAAGAGGAAGAAAAGAAAGAGATATTCTTCGTCTGATTCCTCAGACATGTCAGATTCTTATTCTTCAGATTCACATTCACATTCAGATTCATCCGACTCAAGTTCGCTTAGTGATGAAAGGCGTAGGAAGAGAAAAGCCGTTAAAAGAGATAAGCACTACCGTTCCAGGAAAAGAAGAGATGGAAAAAAAGAGAGGAAGAGAGGCCGACATGCCAAACAATCAAGGCGCAAGTCAAAACGGAGGTCAGAAAGTTCAAGTGATACTGAAAGTGAGAGTACTAGAAGCAGCGCCAGCAGTTCTGATGATGATAAAGATGGTCATCGCGTTTCTTCTCGTAAAAACGGCAATTTAAAGAAGGCAGAAAATAAACTTCCAAGAAATCTTGATGTGGTAAAGCAATCCCCACAAGGAGGGAAAAAATCTATTGAACAGAGGAAGAATCTTGATAGAAAGAAAATTGGGGACAACTCATCCGAGGAAGAAGGTGAATTTTCTCCAAAGAATGGTGTTCATGTAACTAACGGGCATAATGCAGAAGCTAAAACTGCTAATCAACAGTCCTACTCAGATGACTCGAACAAGCCCAGCAGAAGTCCATCACACAGTGCAAGTCCTAAGAGGATTACTGGCAGAAGTCCACCAAGAAATTCTCTCGAGCAAAAGAGAGGAAGGCCTTCTAGGAGTCCATTGGGTAGTCCTGTCCGGAAAGCTCCTGAACCTTCTACTTCAAACCACGAACAGGGTTTGTCAAGAAGCACTTCTCCAAATGGCACTCCCAAGCGCATTAGGAAAGGACGTGGTTTCACTGATCAATATGCCTTTGCACGTCGCTACCGTACTCCATCTCCAGAGCGTTCACGGGGCAACTCTTATCGTTACGGTGGAAGAGACATTTATAGAAGTAACCGTGATAGGTACTCAAGCTACCGGAATTATTCTGAGCGCTCACAACCTCGACGTTTCCGGAGCCCACCAAGAGGCAGGAGTCCTCCCAGATCTCGAAGCCAGAGAAGTCGAAGTAGGAGCATATCTCGGAGCCCTGGTGGATATCGTGGCCGGTATAGGGACCGCAGTCGCAGCCGTAGTCGTAGTCCAGCAGATCGACCTCCTATAAGTGACAGATTAAAATCCCGCCTTGGACCTCGCATTGGTGATCAGCGTTCTCCAGACAGAGGTAGGGCTAAGTCCAGGTCGAGAAGCCGAGGGGTATCTCATTCCAGATCTCCCAATGCTACACCTAAGCGTCGTAACAGGACGACTAGGTCTCCCAGTAGGTCAAGATCAAGCTCTCCAGCTGAACAAAGGGGGTTGGTCTCATATGACGATATCAGTCCTGAATCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1138

Protein Analysis

665

Amino Acids

74.51

Weight (kDa)

10.94

Isoelectric Point (pI)

80.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pro_isomerase PF00160 11 - 173 1.2e-49 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 374
AasI GACNNNNNNGTC 1 cut(s) 1915
AccB7I CCANNNNNTGG 1 cut(s) 1157
AccI GTMKAC 2 cut(s) 155, 510
AccII CGCG 1 cut(s) 978
AccIII TCCGGA 2 cut(s) 1356, 1617
AciI CCGC 5 cut(s) 86, 255, 342, 1723, 1786
AcoI YGGCCR 1 cut(s) 1708
AcsI RAATTY 4 cut(s) 112, 292, 1142, 1300
AcuI CTGAAG 2 cut(s) 668, 702
AdeI CACNNNGTG 1 cut(s) 1259
AfaI GTAC 4 cut(s) 130, 931, 1492, 1571
AfeI AGCGCT 1 cut(s) 1598
AfiI CCNNNNNNNGG 8 cut(s) 48, 1064, 1157, 1393, 1631, 1717, 1802, 1826
AflIII ACRYGT 2 cut(s) 409, 699
AgsI TTSAA 6 cut(s) 237, 304, 382, 909, 1082, 1383
AjiI CACGTC 2 cut(s) 1451, 1481
AjnI CCWGG 3 cut(s) 818, 1693, 1841
AluBI AGCT 7 cut(s) 79, 467, 1193, 1364, 1578, 1941, 1949
AluI AGCT 7 cut(s) 79, 467, 1193, 1364, 1578, 1941, 1949
Alw26I GTCTC 4 cut(s) 366, 1536, 1923, 1972
Ama87I CYCGRG 1 cut(s) 1307
Aor13HI TCCGGA 2 cut(s) 1356, 1617
Aor51HI AGCGCT 1 cut(s) 1598
AoxI GGCC 5 cut(s) 51, 319, 856, 1325, 1708
ApaI GGGCCC 1 cut(s) 55
ApeKI GCWGC 2 cut(s) 939, 1731
ApoI RAATTY 4 cut(s) 112, 292, 1142, 1300
ArsI GACNNNNNNTTYG 2 cut(s) 881, 913
Asp700I GAANNNNTTC 3 cut(s) 487, 1327, 1411
AspLEI GCGC 5 cut(s) 220, 882, 944, 1437, 1599
AspS9I GGNCC 5 cut(s) 51, 52, 344, 1720, 1793
AsuC2I CCSGG 1 cut(s) 318
AsuHPI GGTGA 7 cut(s) 146, 239, 511, 530, 532, 1151, 1817
AvaI CYCGRG 1 cut(s) 1307
AvaII GGWCC 3 cut(s) 344, 1720, 1793
BaeGI GKGCMC 1 cut(s) 55
BanII GRGCYC 4 cut(s) 55, 124, 1625, 1694
BbsI GAAGAC 1 cut(s) 19
BbvI GCAGC 2 cut(s) 951, 1743
BccI CCATC 5 cut(s) 41, 827, 962, 1258, 1504
BceAI ACGGC 3 cut(s) 776, 1012, 1719
BcgI CGANNNNNNTGC 4 cut(s) 65, 99, 176, 210
BciT130I CCWGG 3 cut(s) 820, 1695, 1843
BciVI GTATCC 1 cut(s) 49
BclI TGATCA 2 cut(s) 1462, 1807
BcnI CCSGG 1 cut(s) 318
BcoDI GTCTC 4 cut(s) 366, 1536, 1923, 1972
BfaI CTAG 3 cut(s) 933, 1332, 1914
BfmI CTRYAG 1 cut(s) 156
BfoI RGCGCY 2 cut(s) 945, 1600
BfuI GTATCC 1 cut(s) 49
BglII AGATCT 2 cut(s) 1649, 1874
BisI GCNGC 2 cut(s) 940, 1732
BlsI GCNGC 2 cut(s) 941, 1733
BmcAI AGTACT 1 cut(s) 931
Bme1390I CCNGG 4 cut(s) 318, 820, 1695, 1843
Bme18I GGWCC 3 cut(s) 344, 1720, 1793
BmeT110I CYCGRG 1 cut(s) 1307
BmgBI CACGTC 2 cut(s) 1451, 1481
BmgT120I GGNCC 5 cut(s) 51, 52, 344, 1720, 1793
BmiI GGNNCC 6 cut(s) 52, 53, 54, 1622, 1691, 1721
BmrFI CCNGG 4 cut(s) 318, 820, 1695, 1843
BmrI ACTGGG 2 cut(s) 15, 1917
BmuI ACTGGG 2 cut(s) 15, 1917
BoxI GACNNNNGTC 1 cut(s) 1725
BpiI GAAGAC 1 cut(s) 19
BplI GAGNNNNNCTC 2 cut(s) 1669, 1701
BpmI CTGGAG 3 cut(s) 1485, 1803, 1929
Bpu10I CCTNAGC 1 cut(s) 1893
BpuEI CTTGAG 2 cut(s) 736, 1558
BpuMI CCSGG 1 cut(s) 318
BsaBI GATNNNNATC 2 cut(s) 972, 1780
BsaI GGTCTC 3 cut(s) 366, 1923, 1972
BsaJI CCNNGG 4 cut(s) 1128, 1693, 1789, 1855
BsaWI WCCGGW 3 cut(s) 1356, 1581, 1617
BsaXI ACNNNNNCTCC 6 cut(s) 1483, 1513, 1681, 1711, 1903, 1933
Bsc4I CCNNNNNNNGG 8 cut(s) 48, 1064, 1157, 1393, 1631, 1717, 1802, 1826
Bse118I RCCGGY 1 cut(s) 1710
Bse1I ACTGG 6 cut(s) 21, 256, 501, 543, 1285, 1923
Bse8I GATNNNNATC 2 cut(s) 972, 1780
BseAI TCCGGA 2 cut(s) 1356, 1617
BseBI CCWGG 3 cut(s) 820, 1695, 1843
BseDI CCNNGG 4 cut(s) 1128, 1693, 1789, 1855
BseGI GGATG 3 cut(s) 94, 743, 1124
BseJI GATNNNNATC 2 cut(s) 972, 1780
BseLI CCNNNNNNNGG 8 cut(s) 48, 1064, 1157, 1393, 1631, 1717, 1802, 1826
BseMII CTCAG 5 cut(s) 377, 591, 708, 1233, 1584
BseNI ACTGG 6 cut(s) 21, 256, 501, 543, 1285, 1923
BseSI GKGCMC 1 cut(s) 55
BseXI GCAGC 2 cut(s) 951, 1743
BseYI CCCAGC 1 cut(s) 1238
Bsh1236I CGCG 1 cut(s) 978
BshFI GGCC 5 cut(s) 53, 321, 858, 1327, 1710
BsiHKCI CYCGRG 1 cut(s) 1307
BsiSI CCGG 5 cut(s) 318, 1357, 1582, 1618, 1711
BslFI GGGAC 2 cut(s) 1130, 1733
BslI CCNNNNNNNGG 8 cut(s) 48, 1064, 1157, 1393, 1631, 1717, 1802, 1826
BsmAI GTCTC 4 cut(s) 366, 1536, 1923, 1972
BsmFI GGGAC 2 cut(s) 1130, 1733
BsnI GGCC 5 cut(s) 53, 321, 858, 1327, 1710
Bso31I GGTCTC 3 cut(s) 366, 1923, 1972
BsoBI CYCGRG 1 cut(s) 1307
Bsp120I GGGCCC 1 cut(s) 51
Bsp1286I GDGCHC 4 cut(s) 55, 124, 1625, 1694
Bsp13I TCCGGA 2 cut(s) 1356, 1617
Bsp1407I TGTACA 1 cut(s) 128
Bsp143I GATC 8 cut(s) 72, 475, 1462, 1649, 1753, 1807, 1874, 1934
BspACI CCGC 5 cut(s) 86, 255, 342, 1723, 1786
BspANI GGCC 5 cut(s) 53, 321, 858, 1327, 1710
BspCNI CTCAG 5 cut(s) 376, 592, 707, 1232, 1585
BspEI TCCGGA 2 cut(s) 1356, 1617
BspFNI CGCG 1 cut(s) 978
BspLI GGNNCC 6 cut(s) 52, 53, 54, 1622, 1691, 1721
BspTNI GGTCTC 3 cut(s) 366, 1923, 1972
BsrFI RCCGGY 1 cut(s) 1710
BsrGI TGTACA 1 cut(s) 128
BsrI ACTGG 6 cut(s) 21, 256, 501, 543, 1285, 1923
BssAI RCCGGY 1 cut(s) 1710
BssECI CCNNGG 4 cut(s) 1128, 1693, 1789, 1855
BssMI GATC 8 cut(s) 72, 475, 1462, 1649, 1753, 1807, 1874, 1934
BssT1I CCWWGG 1 cut(s) 1789
Bst2UI CCWGG 3 cut(s) 820, 1695, 1843
Bst4CI ACNGT 7 cut(s) 515, 815, 1212, 1259, 1490, 1535, 1562
Bst6I CTCTTC 5 cut(s) 174, 776, 823, 845, 1534
BstAUI TGTACA 1 cut(s) 128
BstC8I GCNNGC 1 cut(s) 946
BstF5I GGATG 3 cut(s) 94, 743, 1124
BstFNI CGCG 1 cut(s) 978
BstH2I RGCGCY 2 cut(s) 945, 1600
BstHHI GCGC 5 cut(s) 220, 882, 944, 1437, 1599
BstKTI GATC 8 cut(s) 75, 478, 1465, 1652, 1756, 1810, 1877, 1937
BstMAI GTCTC 4 cut(s) 366, 1536, 1923, 1972
BstMBI GATC 8 cut(s) 72, 475, 1462, 1649, 1753, 1807, 1874, 1934
BstMWI GCNNNNNNNGC 3 cut(s) 945, 1199, 1731
BstNI CCWGG 3 cut(s) 820, 1695, 1843
BstNSI RCATGY 3 cut(s) 413, 703, 866
BstPAI GACNNNNGTC 1 cut(s) 1725
BstSCI CCNGG 4 cut(s) 316, 818, 1693, 1841
BstSFI CTRYAG 1 cut(s) 156
BstSLI GKGCMC 1 cut(s) 55
BstUI CGCG 1 cut(s) 978
BstV1I GCAGC 2 cut(s) 951, 1743
BstV2I GAAGAC 1 cut(s) 19
BstX2I RGATCY 2 cut(s) 1649, 1874
BstYI RGATCY 2 cut(s) 1649, 1874
BsuI GTATCC 1 cut(s) 49
BsuRI GGCC 5 cut(s) 53, 321, 858, 1327, 1710
BtgZI GCGATG 1 cut(s) 959
BtrI CACGTC 2 cut(s) 1451, 1481
BtsCI GGATG 3 cut(s) 94, 743, 1124
BtsIMutI CAGTG 5 cut(s) 28, 550, 588, 1264, 1458
Cac8I GCNNGC 1 cut(s) 946
CfoI GCGC 5 cut(s) 220, 882, 944, 1437, 1599
Cfr10I RCCGGY 1 cut(s) 1710
Cfr13I GGNCC 5 cut(s) 51, 52, 344, 1720, 1793
CseI GACGC 1 cut(s) 1886
Csp6I GTAC 4 cut(s) 129, 930, 1491, 1570
CviAII CATG 5 cut(s) 308, 410, 700, 863, 1166
CviQI GTAC 4 cut(s) 129, 930, 1491, 1570
DpnI GATC 8 cut(s) 74, 477, 1464, 1651, 1755, 1809, 1876, 1936
DpnII GATC 8 cut(s) 72, 475, 1462, 1649, 1753, 1807, 1874, 1934
DraI TTTAAA 2 cut(s) 298, 1005
DraIII CACNNNGTG 1 cut(s) 1259
DrdI GACNNNNNNGTC 1 cut(s) 1915
DseDI GACNNNNNNGTC 1 cut(s) 1915
EaeI YGGCCR 1 cut(s) 1708
Eam1104I CTCTTC 5 cut(s) 174, 776, 823, 845, 1534
EarI CTCTTC 5 cut(s) 174, 776, 823, 845, 1534
EciI GGCGGA 1 cut(s) 270
Eco130I CCWWGG 1 cut(s) 1789
Eco147I AGGCCT 1 cut(s) 1327
Eco24I GRGCYC 4 cut(s) 55, 124, 1625, 1694
Eco31I GGTCTC 3 cut(s) 366, 1923, 1972
Eco32I GATATC 2 cut(s) 1703, 1981
Eco47I GGWCC 3 cut(s) 344, 1720, 1793
Eco47III AGCGCT 1 cut(s) 1598
Eco57I CTGAAG 2 cut(s) 668, 702
Eco88I CYCGRG 1 cut(s) 1307
EcoO109I RGGNCCY 2 cut(s) 51, 52
EcoRII CCWGG 3 cut(s) 818, 1693, 1841
EcoRV GATATC 2 cut(s) 1703, 1981
EcoT14I CCWWGG 1 cut(s) 1789
EcoT38I GRGCYC 4 cut(s) 55, 124, 1625, 1694
ErhI CCWWGG 1 cut(s) 1789
FaeI CATG 5 cut(s) 311, 413, 703, 866, 1169
FalI AAGNNNNNCTT 2 cut(s) 1396, 1428
FaqI GGGAC 2 cut(s) 1130, 1733
FatI CATG 5 cut(s) 307, 409, 699, 862, 1165
FauI CCCGC 1 cut(s) 1793
FauNDI CATATG 1 cut(s) 1972
FbaI TGATCA 2 cut(s) 1462, 1807
FblI GTMKAC 2 cut(s) 155, 510
Fnu4HI GCNGC 2 cut(s) 940, 1732
FokI GGATG 3 cut(s) 101, 730, 1111
FriOI GRGCYC 4 cut(s) 55, 124, 1625, 1694
Fsp4HI GCNGC 2 cut(s) 940, 1732
FspBI CTAG 3 cut(s) 933, 1332, 1914
GlaI GCGC 5 cut(s) 219, 881, 943, 1436, 1598
GluI GCNGC 2 cut(s) 940, 1732
GsaI CCCAGC 1 cut(s) 1242
GsuI CTGGAG 3 cut(s) 1485, 1803, 1929
HaeII RGCGCY 2 cut(s) 945, 1600
HaeIII GGCC 5 cut(s) 53, 321, 858, 1327, 1710
HapII CCGG 5 cut(s) 318, 1357, 1582, 1618, 1711
HgaI GACGC 1 cut(s) 1886
HhaI GCGC 5 cut(s) 220, 882, 944, 1437, 1599
Hin1II CATG 5 cut(s) 311, 413, 703, 866, 1169
Hin6I GCGC 5 cut(s) 218, 880, 942, 1435, 1597
HinP1I GCGC 5 cut(s) 218, 880, 942, 1435, 1597
HpaII CCGG 5 cut(s) 318, 1357, 1582, 1618, 1711
HphI GGTGA 7 cut(s) 146, 239, 511, 530, 532, 1151, 1817
Hpy166II GTNNAC 4 cut(s) 156, 511, 1292, 1511
Hpy8I GTNNAC 4 cut(s) 156, 511, 1292, 1511
Hpy99I CGWCG 4 cut(s) 61, 1485, 1614, 1902
HpyCH4III ACNGT 7 cut(s) 515, 815, 1212, 1259, 1490, 1535, 1562
HpyCH4IV ACGT 3 cut(s) 1450, 1480, 1612
HpyCH4V TGCA 5 cut(s) 284, 548, 1187, 1262, 1478
HpyF10VI GCNNNNNNNGC 3 cut(s) 945, 1199, 1731
HpySE526I ACGT 3 cut(s) 1450, 1480, 1612
Hsp92II CATG 5 cut(s) 311, 413, 703, 866, 1169
HspAI GCGC 5 cut(s) 218, 880, 942, 1435, 1597
Kpn2I TCCGGA 2 cut(s) 1356, 1617
Ksp22I TGATCA 2 cut(s) 1462, 1807
Kzo9I GATC 8 cut(s) 72, 475, 1462, 1649, 1753, 1807, 1874, 1934
LmnI GCTCC 4 cut(s) 1369, 1620, 1677, 1689
Lsp1109I GCAGC 2 cut(s) 951, 1743
MaeI CTAG 3 cut(s) 933, 1332, 1914
MaeII ACGT 3 cut(s) 1450, 1480, 1612
MaeIII GTNAC 6 cut(s) 427, 1168, 1529, 1556, 1769, 1901
MalI GATC 8 cut(s) 74, 477, 1464, 1651, 1755, 1809, 1876, 1936
MboI GATC 8 cut(s) 72, 475, 1462, 1649, 1753, 1807, 1874, 1934
MflI RGATCY 2 cut(s) 1649, 1874
MhlI GDGCHC 4 cut(s) 55, 124, 1625, 1694
MlyI GAGTC 4 cut(s) 743, 1220, 1345, 1648
MmeI TCCRAC 1 cut(s) 771
MroI TCCGGA 2 cut(s) 1356, 1617
MroXI GAANNNNTTC 3 cut(s) 487, 1327, 1411
MseI TTAA 5 cut(s) 297, 399, 795, 1004, 1778
MslI CAYNNNNRTG 1 cut(s) 399
MspA1I CMGCKG 1 cut(s) 1949
MspI CCGG 5 cut(s) 318, 1357, 1582, 1618, 1711
MspR9I CCNGG 4 cut(s) 318, 820, 1695, 1843
MvaI CCWGG 3 cut(s) 820, 1695, 1843
MvnI CGCG 1 cut(s) 978
MwoI GCNNNNNNNGC 3 cut(s) 945, 1199, 1731
NciI CCSGG 1 cut(s) 318
NdeI CATATG 1 cut(s) 1972
NdeII GATC 8 cut(s) 72, 475, 1462, 1649, 1753, 1807, 1874, 1934
NlaIII CATG 5 cut(s) 311, 413, 703, 866, 1169
NlaIV GGNNCC 6 cut(s) 52, 53, 54, 1622, 1691, 1721
NmeAIII GCCGAG 1 cut(s) 1880
NmuCI GTSAC 1 cut(s) 1769
NspI RCATGY 3 cut(s) 413, 703, 866
PaeR7I CTCGAG 1 cut(s) 1307
PceI AGGCCT 1 cut(s) 1327
PciI ACATGT 2 cut(s) 409, 699
PcsI WCGNNNNNNNCGW 1 cut(s) 1486
PdmI GAANNNNTTC 3 cut(s) 487, 1327, 1411
PfeI GAWTC 6 cut(s) 689, 707, 722, 740, 1093, 1991
PflFI GACNNNGTC 1 cut(s) 1915
PflMI CCANNNNNTGG 1 cut(s) 1157
PfoI TCCNGGA 1 cut(s) 818
PkrI GCNGC 2 cut(s) 941, 1733
PleI GAGTC 4 cut(s) 743, 1220, 1344, 1647
PpsI GAGTC 4 cut(s) 743, 1220, 1344, 1647
PscI ACATGT 2 cut(s) 409, 699
PshAI GACNNNNGTC 1 cut(s) 1725
PsiI TTATAA 1 cut(s) 374
Psp6I CCWGG 3 cut(s) 818, 1693, 1841
PspFI CCCAGC 1 cut(s) 1238
PspGI CCWGG 3 cut(s) 818, 1693, 1841
PspN4I GGNNCC 6 cut(s) 52, 53, 54, 1622, 1691, 1721
PspOMI GGGCCC 1 cut(s) 51
PspPI GGNCC 5 cut(s) 51, 52, 344, 1720, 1793
PsuI RGATCY 2 cut(s) 1649, 1874
PsyI GACNNNGTC 1 cut(s) 1915
PvuII CAGCTG 1 cut(s) 1949
RsaI GTAC 4 cut(s) 130, 931, 1492, 1571
RsaNI GTAC 4 cut(s) 129, 930, 1491, 1570
RseI CAYNNNNRTG 1 cut(s) 399
SaqAI TTAA 5 cut(s) 297, 399, 795, 1004, 1778
SatI GCNGC 2 cut(s) 940, 1732
Sau3AI GATC 8 cut(s) 72, 475, 1462, 1649, 1753, 1807, 1874, 1934
Sau96I GGNCC 5 cut(s) 51, 52, 344, 1720, 1793
ScaI AGTACT 1 cut(s) 931
SchI GAGTC 4 cut(s) 743, 1220, 1345, 1648
ScrFI CCNGG 4 cut(s) 318, 820, 1695, 1843
SduI GDGCHC 4 cut(s) 55, 124, 1625, 1694
SfcI CTRYAG 1 cut(s) 156
Sfr274I CTCGAG 1 cut(s) 1307
SinI GGWCC 3 cut(s) 344, 1720, 1793
SlaI CTCGAG 1 cut(s) 1307
SmiMI CAYNNNNRTG 1 cut(s) 399
SmlI CTYRAG 3 cut(s) 751, 1307, 1573
SmoI CTYRAG 3 cut(s) 751, 1307, 1573
SseBI AGGCCT 1 cut(s) 1327
SsiI CCGC 5 cut(s) 86, 255, 342, 1723, 1786
SspMI CTAG 3 cut(s) 933, 1332, 1914
StuI AGGCCT 1 cut(s) 1327
StyD4I CCNGG 4 cut(s) 316, 818, 1693, 1841
StyI CCWWGG 1 cut(s) 1789
TaaI ACNGT 7 cut(s) 515, 815, 1212, 1259, 1490, 1535, 1562
TaiI ACGT 3 cut(s) 1453, 1483, 1615
TaqI TCGA 9 cut(s) 75, 196, 1229, 1308, 1609, 1654, 1669, 1756, 1847
TatI WGTACW 2 cut(s) 128, 929
TfiI GAWTC 6 cut(s) 689, 707, 722, 740, 1093, 1991
Tru1I TTAA 5 cut(s) 297, 399, 795, 1004, 1778
Tru9I TTAA 5 cut(s) 297, 399, 795, 1004, 1778
TscAI CASTG 5 cut(s) 28, 550, 588, 1264, 1465
TseFI GTSAC 1 cut(s) 1769
TseI GCWGC 2 cut(s) 939, 1731
Tsp45I GTSAC 1 cut(s) 1769
TspDTI ATGAA 6 cut(s) 182, 303, 582, 732, 783, 1154
TspGWI ACGGA 3 cut(s) 74, 261, 907
TspRI CASTG 5 cut(s) 28, 550, 588, 1264, 1465
Tth111I GACNNNGTC 1 cut(s) 1915
Van91I CCANNNNNTGG 1 cut(s) 1157
VpaK11BI GGWCC 3 cut(s) 344, 1720, 1793
XapI RAATTY 4 cut(s) 112, 292, 1142, 1300
XceI RCATGY 3 cut(s) 413, 703, 866
XhoI CTCGAG 1 cut(s) 1307
XmiI GTMKAC 2 cut(s) 155, 510
XmnI GAANNNNTTC 3 cut(s) 487, 1327, 1411
XspI CTAG 3 cut(s) 933, 1332, 1914
ZrmI AGTACT 1 cut(s) 931
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.