Urb2/Npa2 family
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr6g0245541 |
| rosa_samantha | Rh6CG023400 Rh6CG024300 Rh6CG025500 Rh6DG023400 Rh6DG024800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 132 |
| AclWI | GGATC | 1 cut(s) | 302 |
| AcsI | RAATTY | 1 cut(s) | 44 |
| AfaI | GTAC | 1 cut(s) | 323 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 132 |
| AgsI | TTSAA | 1 cut(s) | 365 |
| AluBI | AGCT | 1 cut(s) | 391 |
| AluI | AGCT | 1 cut(s) | 391 |
| Alw26I | GTCTC | 1 cut(s) | 127 |
| AlwI | GGATC | 1 cut(s) | 302 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 35 |
| ApeKI | GCWGC | 2 cut(s) | 191, 388 |
| ApoI | RAATTY | 1 cut(s) | 44 |
| AspS9I | GGNCC | 2 cut(s) | 17, 381 |
| AvaII | GGWCC | 2 cut(s) | 17, 381 |
| BbvI | GCAGC | 2 cut(s) | 203, 400 |
| BccI | CCATC | 1 cut(s) | 271 |
| BceAI | ACGGC | 1 cut(s) | 331 |
| BcoDI | GTCTC | 1 cut(s) | 127 |
| BfaI | CTAG | 1 cut(s) | 90 |
| BfmI | CTRYAG | 1 cut(s) | 231 |
| BisI | GCNGC | 2 cut(s) | 192, 389 |
| BlsI | GCNGC | 2 cut(s) | 193, 390 |
| Bme18I | GGWCC | 2 cut(s) | 17, 381 |
| BmgT120I | GGNCC | 2 cut(s) | 17, 381 |
| BmsI | GCATC | 1 cut(s) | 22 |
| BpmI | CTGGAG | 1 cut(s) | 192 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 132 |
| Bse118I | RCCGGY | 1 cut(s) | 171 |
| BseGI | GGATG | 1 cut(s) | 282 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 132 |
| BseRI | GAGGAG | 1 cut(s) | 244 |
| BseXI | GCAGC | 2 cut(s) | 203, 400 |
| BsgI | GTGCAG | 1 cut(s) | 407 |
| BsiSI | CCGG | 1 cut(s) | 172 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 132 |
| BsmAI | GTCTC | 1 cut(s) | 127 |
| Bsp1407I | TGTACA | 1 cut(s) | 321 |
| Bsp143I | GATC | 3 cut(s) | 84, 294, 355 |
| BspMAI | CTGCAG | 1 cut(s) | 235 |
| BspPI | GGATC | 1 cut(s) | 302 |
| BsrFI | RCCGGY | 1 cut(s) | 171 |
| BsrGI | TGTACA | 1 cut(s) | 321 |
| BssAI | RCCGGY | 1 cut(s) | 171 |
| BssMI | GATC | 3 cut(s) | 84, 294, 355 |
| Bst4CI | ACNGT | 2 cut(s) | 64, 385 |
| Bst6I | CTCTTC | 1 cut(s) | 344 |
| BstAUI | TGTACA | 1 cut(s) | 321 |
| BstC8I | GCNNGC | 2 cut(s) | 27, 189 |
| BstF5I | GGATG | 1 cut(s) | 282 |
| BstKTI | GATC | 3 cut(s) | 87, 297, 358 |
| BstMAI | GTCTC | 1 cut(s) | 127 |
| BstMBI | GATC | 3 cut(s) | 84, 294, 355 |
| BstSFI | CTRYAG | 1 cut(s) | 231 |
| BstV1I | GCAGC | 2 cut(s) | 203, 400 |
| BtsCI | GGATG | 1 cut(s) | 282 |
| Cac8I | GCNNGC | 2 cut(s) | 27, 189 |
| CaiI | CAGNNNCTG | 1 cut(s) | 35 |
| Cfr10I | RCCGGY | 1 cut(s) | 171 |
| Cfr13I | GGNCC | 2 cut(s) | 17, 381 |
| Csp6I | GTAC | 1 cut(s) | 322 |
| CviJI | RGCY | 1 cut(s) | 391 |
| CviKI_1 | RGCY | 1 cut(s) | 391 |
| CviQI | GTAC | 1 cut(s) | 322 |
| DpnI | GATC | 3 cut(s) | 86, 296, 357 |
| DpnII | GATC | 3 cut(s) | 84, 294, 355 |
| Eam1104I | CTCTTC | 1 cut(s) | 344 |
| EarI | CTCTTC | 1 cut(s) | 344 |
| Eco47I | GGWCC | 2 cut(s) | 17, 381 |
| FaiI | YATR | 5 cut(s) | 52, 162, 181, 183, 203 |
| Fnu4HI | GCNGC | 2 cut(s) | 192, 389 |
| FokI | GGATG | 1 cut(s) | 289 |
| Fsp4HI | GCNGC | 2 cut(s) | 192, 389 |
| FspBI | CTAG | 1 cut(s) | 90 |
| GluI | GCNGC | 2 cut(s) | 192, 389 |
| GsuI | CTGGAG | 1 cut(s) | 192 |
| HapII | CCGG | 1 cut(s) | 172 |
| HinfI | GANTC | 4 cut(s) | 71, 120, 245, 394 |
| HpaII | CCGG | 1 cut(s) | 172 |
| Hpy166II | GTNNAC | 1 cut(s) | 40 |
| Hpy188I | TCNGA | 4 cut(s) | 76, 84, 111, 289 |
| Hpy188III | TCNNGA | 2 cut(s) | 209, 219 |
| Hpy8I | GTNNAC | 1 cut(s) | 40 |
| HpyAV | CCTTC | 2 cut(s) | 259, 338 |
| HpyCH4III | ACNGT | 2 cut(s) | 64, 385 |
| HpyCH4V | TGCA | 2 cut(s) | 233, 388 |
| Kzo9I | GATC | 3 cut(s) | 84, 294, 355 |
| LpnPI | CCDG | 5 cut(s) | 11, 185, 222, 249, 253 |
| Lsp1109I | GCAGC | 2 cut(s) | 203, 400 |
| LweI | GCATC | 1 cut(s) | 22 |
| MaeI | CTAG | 1 cut(s) | 90 |
| MaeIII | GTNAC | 1 cut(s) | 58 |
| MalI | GATC | 3 cut(s) | 86, 296, 357 |
| MboI | GATC | 3 cut(s) | 84, 294, 355 |
| MboII | GAAGA | 1 cut(s) | 331 |
| MluCI | AATT | 1 cut(s) | 44 |
| MlyI | GAGTC | 1 cut(s) | 129 |
| MnlI | CCTC | 2 cut(s) | 216, 265 |
| MseI | TTAA | 1 cut(s) | 406 |
| MspA1I | CMGCKG | 1 cut(s) | 391 |
| MspI | CCGG | 1 cut(s) | 172 |
| NdeII | GATC | 3 cut(s) | 84, 294, 355 |
| NmuCI | GTSAC | 1 cut(s) | 58 |
| PfeI | GAWTC | 3 cut(s) | 71, 245, 394 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 132 |
| PkrI | GCNGC | 2 cut(s) | 193, 390 |
| PleI | GAGTC | 1 cut(s) | 128 |
| PpsI | GAGTC | 1 cut(s) | 128 |
| PspPI | GGNCC | 2 cut(s) | 17, 381 |
| PstI | CTGCAG | 1 cut(s) | 235 |
| PstNI | CAGNNNCTG | 1 cut(s) | 35 |
| PvuII | CAGCTG | 1 cut(s) | 391 |
| RsaI | GTAC | 1 cut(s) | 323 |
| RsaNI | GTAC | 1 cut(s) | 322 |
| SaqAI | TTAA | 1 cut(s) | 406 |
| SatI | GCNGC | 2 cut(s) | 192, 389 |
| Sau3AI | GATC | 3 cut(s) | 84, 294, 355 |
| Sau96I | GGNCC | 2 cut(s) | 17, 381 |
| SchI | GAGTC | 1 cut(s) | 129 |
| SetI | ASST | 2 cut(s) | 330, 393 |
| SfaNI | GCATC | 1 cut(s) | 22 |
| SfcI | CTRYAG | 1 cut(s) | 231 |
| SinI | GGWCC | 2 cut(s) | 17, 381 |
| Sse9I | AATT | 1 cut(s) | 44 |
| SspMI | CTAG | 1 cut(s) | 90 |
| TaaI | ACNGT | 2 cut(s) | 64, 385 |
| TaqI | TCGA | 2 cut(s) | 154, 354 |
| TasI | AATT | 1 cut(s) | 44 |
| TatI | WGTACW | 1 cut(s) | 321 |
| TfiI | GAWTC | 3 cut(s) | 71, 245, 394 |
| Tru1I | TTAA | 1 cut(s) | 406 |
| Tru9I | TTAA | 1 cut(s) | 406 |
| TseFI | GTSAC | 1 cut(s) | 58 |
| TseI | GCWGC | 2 cut(s) | 191, 388 |
| Tsp45I | GTSAC | 1 cut(s) | 58 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 132 |
| VpaK11BI | GGWCC | 2 cut(s) | 17, 381 |
| XapI | RAATTY | 1 cut(s) | 44 |
| XspI | CTAG | 1 cut(s) | 90 |