Rh6CG081500

DNA repair and recombination protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
OG0020287
Physical Location & Seq
Forward (+)
8817738 .. 8820984
3247 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG081500.1

Sequence Viewer

Length: 1428 bp
ATGGAAGACGAAGAAGAAGTCATCTCACTCTCCGATTCCTCCTCCGATTCCAGTTCCAGCGACGACTACACAGCCGACCCACAAGACTTGGATCTCGGAGAAGAAGAAGAAGAAGAAGATCAAGAGCTCGAAAACGAACCAGAGGTTCAAAACGACGACGTATGCGAGAATCGTCGGAGACCCAAGGCCCGCCCTCCGCTTCCGCCGCCGTCCGGAAAAGATCGGAAATCGAAGAATGTCGATGCTCTCCTAAGCGGCAACCTTGTGGTGAAAAGACAGCCTCTTCTTCCACGAGTTCTGTCGGTGACGGAAGGAGCAACAGTTTGTAGGAAACCGTTTAAACCACCATGCTCCAAAGGCTATGATGATGGAAATGACCAGCTCACTCGGCGTCTCTCAGCACGCAGACGGTTTGTTCCCTGGGGCGGTTCATCAAGTGCACCGTTTTTTCCGGTTATTGAGAGGTTTCCTAGTTTGCCAAATGATGCTGAGAAAGATGTAGTGGAAGAGAGTGTGACCCTGCCACCTGGAATTGATCCTTTGGTCTTGTGGCAACCTGAAGAATTCGAGGATGGGGATGCTAATATGGTGCAGATAGTAGTGGACCCTCTGCTCGTTCGTTTCCTTCGACCACATCAAAGAGAAGGGGTTCAATTCATGTTTGATTGTGTTGCGGGCTTAAATAGTGCTGCAAATATACATGGATGCATTCTTGCAGATGATATGGGGTTGGGAAAGACATTGCAGTCAATCACATTACTTTATACCCTTCTTTACCAAGGGTTTGATGGGAAATCAATGGTTAAAAAGGCCATTATAGTCACTCCCACCAGTCTTGTGAGCAATTGGGAGGCTGAGATAAAGAAGTGGGTCGGAGACAGAGTTTGCCTCATTGCTCTGTGTGAAAGTACCAGAGATGATGTTGTTTCTGGAATTGATCAGTTCACAAGTGCTCGCAGCCGTTTGCAGGTTCTAATTGTTTCTTACGAAACATTCCGAATGCATTGTACAAAGTTTAGCCACAGTGAATCCTGTGACCTTCTCATATGTGATGAGGCGCACAGGCTAAAGAATGACCAAACGATGACGAATAGGGCATTGGCTGCTCTTTCATGCAAGCGGAGGATTTTGTTGTCAGGAACTCCAATGCAGAATGACCTAGAAGAGTTCTTTGCCATGGTCAACTTCACTAATCCAGGAATCTTAGGTGATGCTGCACATTTTCGTCGCTACTATGAGGCACCTATTATTTGTGGAAGAGAACCTAATGCCTGTGAAGAAGAGAGGAAACTAGGTCTTGAGCGCTCTTCAGAACTCAGTGCAAAAGTTAATCCGTTTATACTGCGGAGGACTAATGCACTACTTTCAAATCACCTGCCACCAAAGTTTACATACCCTCTACGTTCTGGGAGAACGAGCGGTAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000018 GO:0000280 GO:0000724 GO:0000725 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006310 GO:0006311 GO:0006325 GO:0006338 GO:0006342 GO:0006355 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007127 GO:0007131 GO:0008094 GO:0008150 GO:0008152 GO:0009314 GO:0009628 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010035 GO:0010038 GO:0010212 GO:0010332 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0015616 GO:0016043 GO:0016458 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019219 GO:0019222 GO:0022402 GO:0022414 GO:0030491 GO:0030702 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0033170 GO:0033554 GO:0034641 GO:0035822 GO:0035825 GO:0035861 GO:0040029 GO:0042221 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044237 GO:0044238 GO:0044260 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044427 GO:0044446 GO:0044464 GO:0045003 GO:0045814 GO:0045892 GO:0045934 GO:0046483 GO:0048285 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051276 GO:0051321 GO:0051701 GO:0051704 GO:0051716 GO:0060255 GO:0061806 GO:0061982 GO:0065007 GO:0070887 GO:0071214 GO:0071241 GO:0071248 GO:0071478 GO:0071479 GO:0071480 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0090734 GO:0097159 GO:0104004 GO:0140013 GO:0140097 GO:1901360 GO:1901363 GO:1902679 GO:1903046 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03440 map03440
Pfam Domains
Protein Families
Helicase_C SNF2_N

Protein Analysis

475

Amino Acids

53.21

Weight (kDa)

5.06

Isoelectric Point (pI)

58.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ResIII PF04851 209 - 382 1.7e-09 Type III restriction enzyme, res subunit
SNF2-rel_dom PF00176 212 - 464 1.6e-58 SNF2-related domain
DEAD PF00270 235 - 389 6e-09 DEAD/DEAH box helicase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0020287)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g06200 FvH4_2g06200
rosa_multiflora Rmu_sc0006706.1_g000001
rosa_samantha Rh6AG093900 Rh6CG081500 Rh6DG076900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1383
AasI GACNNNNNNGTC 1 cut(s) 745
Acc36I ACCTGC 2 cut(s) 958, 1383
AccB1I GGYRCC 1 cut(s) 1240
AccBSI CCGCTC 1 cut(s) 1419
AccIII TCCGGA 1 cut(s) 212
AclWI GGATC 2 cut(s) 99, 530
AcsI RAATTY 1 cut(s) 563
AcuI CTGAAG 2 cut(s) 579, 1293
AcyI GRCGYC 1 cut(s) 391
AfaI GTAC 2 cut(s) 910, 1009
AfeI AGCGCT 1 cut(s) 1304
AfiI CCNNNNNNNGG 3 cut(s) 212, 425, 967
AgsI TTSAA 3 cut(s) 149, 653, 1368
AjnI CCWGG 3 cut(s) 419, 526, 1195
AjuI GAANNNNNNNTTGG 2 cut(s) 1082, 1114
AluBI AGCT 2 cut(s) 127, 382
AluI AGCT 2 cut(s) 127, 382
Alw21I GWGCWC 3 cut(s) 129, 442, 955
Alw26I GTCTC 3 cut(s) 172, 398, 870
Alw44I GTGCAC 1 cut(s) 438
AlwI GGATC 2 cut(s) 99, 530
Aor13HI TCCGGA 1 cut(s) 212
Aor51HI AGCGCT 1 cut(s) 1304
AoxI GGCC 2 cut(s) 186, 810
ApaLI GTGCAC 1 cut(s) 438
ApeKI GCWGC 4 cut(s) 689, 957, 1103, 1214
ApoI RAATTY 1 cut(s) 563
ArsI GACNNNNNNTTYG 1 cut(s) 35
Asp700I GAANNNNTTC 1 cut(s) 648
AspLEI GCGC 2 cut(s) 1060, 1305
AspS9I GGNCC 2 cut(s) 187, 604
AsuHPI GGTGA 4 cut(s) 280, 316, 1220, 1364
AvaII GGWCC 1 cut(s) 604
BaeGI GKGCMC 1 cut(s) 442
BanI GGYRCC 1 cut(s) 1240
BanII GRGCYC 1 cut(s) 129
BauI CACGAG 1 cut(s) 291
BbsI GAAGAC 1 cut(s) 12
Bbv12I GWGCWC 3 cut(s) 129, 442, 955
BbvI GCAGC 4 cut(s) 676, 969, 1090, 1201
BccI CCATC 3 cut(s) 362, 566, 782
BceAI ACGGC 2 cut(s) 193, 945
BciT130I CCWGG 3 cut(s) 421, 528, 1197
BclI TGATCA 1 cut(s) 937
BcoDI GTCTC 3 cut(s) 172, 398, 870
BfaI CTAG 3 cut(s) 471, 1160, 1292
BfoI RGCGCY 1 cut(s) 1306
BfuAI ACCTGC 2 cut(s) 958, 1383
BisI GCNGC 6 cut(s) 206, 256, 690, 958, 1104, 1215
BlsI GCNGC 6 cut(s) 207, 257, 691, 959, 1105, 1216
Bme1390I CCNGG 3 cut(s) 421, 528, 1197
Bme18I GGWCC 1 cut(s) 604
BmgT120I GGNCC 2 cut(s) 187, 604
BmiI GGNNCC 2 cut(s) 606, 1242
BmrFI CCNGG 3 cut(s) 421, 528, 1197
BmsI GCATC 5 cut(s) 232, 475, 568, 695, 1201
BpiI GAAGAC 1 cut(s) 12
BplI GAGNNNNNCTC 2 cut(s) 873, 905
Bpu10I CCTNAGC 1 cut(s) 251
BpuEI CTTGAG 1 cut(s) 1319
BsaHI GRCGYC 1 cut(s) 391
BsaI GGTCTC 1 cut(s) 172
BsaJI CCNNGG 5 cut(s) 183, 419, 420, 778, 1176
BsaWI WCCGGW 2 cut(s) 212, 451
BsaXI ACNNNNNCTCC 4 cut(s) 306, 336, 867, 897
Bsc4I CCNNNNNNNGG 3 cut(s) 212, 425, 967
Bse1I ACTGG 2 cut(s) 51, 831
Bse3DI GCAATG 2 cut(s) 740, 891
BseAI TCCGGA 1 cut(s) 212
BseBI CCWGG 3 cut(s) 421, 528, 1197
BseDI CCNNGG 5 cut(s) 183, 419, 420, 778, 1176
BseGI GGATG 3 cut(s) 577, 583, 710
BseLI CCNNNNNNNGG 3 cut(s) 212, 425, 967
BseMI GCAATG 2 cut(s) 740, 891
BseMII CTCAG 4 cut(s) 411, 480, 846, 1330
BseNI ACTGG 2 cut(s) 51, 831
BseRI GAGGAG 1 cut(s) 31
BseSI GKGCMC 1 cut(s) 442
BseXI GCAGC 4 cut(s) 676, 969, 1090, 1201
BsgI GTGCAG 2 cut(s) 611, 1200
BshFI GGCC 2 cut(s) 188, 812
BshNI GGYRCC 1 cut(s) 1240
BsiHKAI GWGCWC 3 cut(s) 129, 442, 955
BsiSI CCGG 2 cut(s) 213, 452
BslI CCNNNNNNNGG 3 cut(s) 212, 425, 967
BsmAI GTCTC 3 cut(s) 172, 398, 870
BsmBI CGTCTC 1 cut(s) 398
BsmI GAATGC 2 cut(s) 708, 1005
BsnI GGCC 2 cut(s) 188, 812
Bso31I GGTCTC 1 cut(s) 172
Bsp1286I GDGCHC 3 cut(s) 129, 442, 955
Bsp13I TCCGGA 1 cut(s) 212
Bsp1407I TGTACA 1 cut(s) 1007
Bsp143I GATC 5 cut(s) 91, 118, 220, 535, 937
Bsp19I CCATGG 1 cut(s) 1176
BspANI GGCC 2 cut(s) 188, 812
BspCNI CTCAG 4 cut(s) 410, 481, 847, 1329
BspEI TCCGGA 1 cut(s) 212
BspLI GGNNCC 2 cut(s) 606, 1242
BspMI ACCTGC 2 cut(s) 958, 1383
BspPI GGATC 2 cut(s) 99, 530
BspQI GCTCTTC 1 cut(s) 1312
BspT107I GGYRCC 1 cut(s) 1240
BspTNI GGTCTC 1 cut(s) 172
BsrBI CCGCTC 1 cut(s) 1419
BsrDI GCAATG 2 cut(s) 740, 891
BsrGI TGTACA 1 cut(s) 1007
BsrI ACTGG 2 cut(s) 51, 831
BssECI CCNNGG 5 cut(s) 183, 419, 420, 778, 1176
BssMI GATC 5 cut(s) 91, 118, 220, 535, 937
BssNI GRCGYC 1 cut(s) 391
BssSI CACGAG 1 cut(s) 291
BssT1I CCWWGG 3 cut(s) 183, 778, 1176
Bst2BI CACGAG 1 cut(s) 291
Bst2UI CCWGG 3 cut(s) 421, 528, 1197
Bst4CI ACNGT 5 cut(s) 322, 336, 411, 444, 1025
Bst6I CTCTTC 6 cut(s) 288, 501, 1158, 1252, 1275, 1312
BstACI GRCGYC 1 cut(s) 391
BstAPI GCANNNNNTGC 1 cut(s) 1103
BstAUI TGTACA 1 cut(s) 1007
BstC8I GCNNGC 5 cut(s) 190, 403, 676, 955, 1118
BstDEI CTNAG 6 cut(s) 251, 397, 489, 855, 1204, 1316
BstDSI CCRYGG 1 cut(s) 1176
BstF5I GGATG 3 cut(s) 577, 583, 710
BstH2I RGCGCY 1 cut(s) 1306
BstHHI GCGC 2 cut(s) 1060, 1305
BstKTI GATC 5 cut(s) 94, 121, 223, 538, 940
BstMAI GTCTC 3 cut(s) 172, 398, 870
BstMBI GATC 5 cut(s) 91, 118, 220, 535, 937
BstMWI GCNNNNNNNGC 4 cut(s) 205, 357, 388, 1103
BstNI CCWGG 3 cut(s) 421, 528, 1197
BstSCI CCNGG 3 cut(s) 419, 526, 1195
BstSLI GKGCMC 1 cut(s) 442
BstV1I GCAGC 4 cut(s) 676, 969, 1090, 1201
BstV2I GAAGAC 1 cut(s) 12
BstX2I RGATCY 1 cut(s) 91
BstYI RGATCY 1 cut(s) 91
BsuRI GGCC 2 cut(s) 188, 812
BtgI CCRYGG 1 cut(s) 1176
BtsCI GGATG 3 cut(s) 577, 583, 710
BtsIMutI CAGTG 2 cut(s) 1030, 1324
BveI ACCTGC 2 cut(s) 958, 1383
Cac8I GCNNGC 5 cut(s) 190, 403, 676, 955, 1118
CfoI GCGC 2 cut(s) 1060, 1305
Cfr13I GGNCC 2 cut(s) 187, 604
CseI GACGC 1 cut(s) 380
Csp6I GTAC 2 cut(s) 909, 1008
CspCI CAANNNNNGTGG 4 cut(s) 69, 104, 817, 852
CviAII CATG 5 cut(s) 348, 658, 701, 1113, 1177
CviQI GTAC 2 cut(s) 909, 1008
DdeI CTNAG 6 cut(s) 251, 397, 489, 855, 1204, 1316
DpnI GATC 5 cut(s) 93, 120, 222, 537, 939
DpnII GATC 5 cut(s) 91, 118, 220, 535, 937
DraI TTTAAA 1 cut(s) 340
DrdI GACNNNNNNGTC 1 cut(s) 745
DseDI GACNNNNNNGTC 1 cut(s) 745
Eam1104I CTCTTC 6 cut(s) 288, 501, 1158, 1252, 1275, 1312
EarI CTCTTC 6 cut(s) 288, 501, 1158, 1252, 1275, 1312
EciI GGCGGA 1 cut(s) 192
Ecl136II GAGCTC 1 cut(s) 127
Eco130I CCWWGG 3 cut(s) 183, 778, 1176
Eco24I GRGCYC 1 cut(s) 129
Eco31I GGTCTC 1 cut(s) 172
Eco47I GGWCC 1 cut(s) 604
Eco47III AGCGCT 1 cut(s) 1304
Eco53kI GAGCTC 1 cut(s) 127
Eco57I CTGAAG 2 cut(s) 579, 1293
EcoICRI GAGCTC 1 cut(s) 127
EcoRI GAATTC 1 cut(s) 563
EcoRII CCWGG 3 cut(s) 419, 526, 1195
EcoT14I CCWWGG 3 cut(s) 183, 778, 1176
EcoT22I ATGCAT 2 cut(s) 710, 1005
EcoT38I GRGCYC 1 cut(s) 129
ErhI CCWWGG 3 cut(s) 183, 778, 1176
Esp3I CGTCTC 1 cut(s) 398
FaeI CATG 5 cut(s) 351, 661, 704, 1116, 1180
FatI CATG 5 cut(s) 347, 657, 700, 1112, 1176
FauI CCCGC 2 cut(s) 197, 667
FauNDI CATATG 1 cut(s) 1046
FbaI TGATCA 1 cut(s) 937
Fnu4HI GCNGC 6 cut(s) 206, 256, 690, 958, 1104, 1215
FokI GGATG 3 cut(s) 584, 590, 717
FriOI GRGCYC 1 cut(s) 129
Fsp4HI GCNGC 6 cut(s) 206, 256, 690, 958, 1104, 1215
FspBI CTAG 3 cut(s) 471, 1160, 1292
GlaI GCGC 2 cut(s) 1059, 1304
GluI GCNGC 6 cut(s) 206, 256, 690, 958, 1104, 1215
HaeII RGCGCY 1 cut(s) 1306
HaeIII GGCC 2 cut(s) 188, 812
HapII CCGG 2 cut(s) 213, 452
HgaI GACGC 1 cut(s) 380
HhaI GCGC 2 cut(s) 1060, 1305
Hin1I GRCGYC 1 cut(s) 391
Hin1II CATG 5 cut(s) 351, 661, 704, 1116, 1180
Hin6I GCGC 2 cut(s) 1058, 1303
HinP1I GCGC 2 cut(s) 1058, 1303
HincII GTYRAC 1 cut(s) 1183
HindII GTYRAC 1 cut(s) 1183
HinfI GANTC 5 cut(s) 35, 47, 169, 1028, 1200
HpaII CCGG 2 cut(s) 213, 452
HphI GGTGA 4 cut(s) 280, 316, 1220, 1364
Hpy166II GTNNAC 5 cut(s) 440, 604, 945, 1183, 1389
Hpy188I TCNGA 8 cut(s) 34, 46, 98, 177, 225, 875, 998, 1312
Hpy188III TCNNGA 5 cut(s) 122, 213, 930, 1137, 1298
Hpy8I GTNNAC 5 cut(s) 440, 604, 945, 1183, 1389
Hpy99I CGWCG 5 cut(s) 65, 158, 161, 177, 1230
HpyAV CCTTC 5 cut(s) 305, 635, 638, 779, 1049
HpyCH4III ACNGT 5 cut(s) 322, 336, 411, 444, 1025
HpyCH4IV ACGT 2 cut(s) 159, 1402
HpyF10VI GCNNNNNNNGC 4 cut(s) 205, 357, 388, 1103
HpyF3I CTNAG 6 cut(s) 251, 397, 489, 855, 1204, 1316
HpySE526I ACGT 2 cut(s) 159, 1402
Hsp92I GRCGYC 1 cut(s) 391
Hsp92II CATG 5 cut(s) 351, 661, 704, 1116, 1180
HspAI GCGC 2 cut(s) 1058, 1303
Kpn2I TCCGGA 1 cut(s) 212
Ksp22I TGATCA 1 cut(s) 937
Kzo9I GATC 5 cut(s) 91, 118, 220, 535, 937
LguI GCTCTTC 1 cut(s) 1312
LmnI GCTCC 2 cut(s) 314, 356
Lsp1109I GCAGC 4 cut(s) 676, 969, 1090, 1201
LweI GCATC 5 cut(s) 232, 475, 568, 695, 1201
MaeI CTAG 3 cut(s) 471, 1160, 1292
MaeII ACGT 2 cut(s) 159, 1402
MaeIII GTNAC 4 cut(s) 304, 514, 820, 1034
MalI GATC 5 cut(s) 93, 120, 222, 537, 939
MbiI CCGCTC 1 cut(s) 1419
MboI GATC 5 cut(s) 91, 118, 220, 535, 937
MfeI CAATTG 1 cut(s) 844
MflI RGATCY 1 cut(s) 91
MhlI GDGCHC 3 cut(s) 129, 442, 955
MluCI AATT 6 cut(s) 531, 563, 653, 844, 933, 975
MmeI TCCRAC 2 cut(s) 155, 853
Mph1103I ATGCAT 2 cut(s) 710, 1005
MroI TCCGGA 1 cut(s) 212
MroXI GAANNNNTTC 1 cut(s) 648
MseI TTAA 4 cut(s) 339, 680, 804, 1329
MspI CCGG 2 cut(s) 213, 452
MspR9I CCNGG 3 cut(s) 421, 528, 1197
MssI GTTTAAAC 1 cut(s) 340
MunI CAATTG 1 cut(s) 844
Mva1269I GAATGC 2 cut(s) 708, 1005
MvaI CCWGG 3 cut(s) 421, 528, 1197
MwoI GCNNNNNNNGC 4 cut(s) 205, 357, 388, 1103
NcoI CCATGG 1 cut(s) 1176
NdeI CATATG 1 cut(s) 1046
NdeII GATC 5 cut(s) 91, 118, 220, 535, 937
NlaIII CATG 5 cut(s) 351, 661, 704, 1116, 1180
NlaIV GGNNCC 2 cut(s) 606, 1242
NmeAIII GCCGAG 1 cut(s) 367
NmuCI GTSAC 4 cut(s) 304, 514, 820, 1034
NsiI ATGCAT 2 cut(s) 710, 1005
PaqCI CACCTGC 1 cut(s) 1383
PasI CCCWGGG 1 cut(s) 420
PciSI GCTCTTC 1 cut(s) 1312
PcsI WCGNNNNNNNCGW 2 cut(s) 162, 625
PctI GAATGC 2 cut(s) 708, 1005
PdmI GAANNNNTTC 1 cut(s) 648
PfeI GAWTC 5 cut(s) 35, 47, 169, 1028, 1200
PfoI TCCNGGA 1 cut(s) 1195
PkrI GCNGC 6 cut(s) 207, 257, 691, 959, 1105, 1216
PmeI GTTTAAAC 1 cut(s) 340
Psp124BI GAGCTC 1 cut(s) 129
Psp6I CCWGG 3 cut(s) 419, 526, 1195
PspGI CCWGG 3 cut(s) 419, 526, 1195
PspN4I GGNNCC 2 cut(s) 606, 1242
PspPI GGNCC 2 cut(s) 187, 604
PsuI RGATCY 1 cut(s) 91
RsaI GTAC 2 cut(s) 910, 1009
RsaNI GTAC 2 cut(s) 909, 1008
SacI GAGCTC 1 cut(s) 129
SapI GCTCTTC 1 cut(s) 1312
SaqAI TTAA 4 cut(s) 339, 680, 804, 1329
SatI GCNGC 6 cut(s) 206, 256, 690, 958, 1104, 1215
Sau3AI GATC 5 cut(s) 91, 118, 220, 535, 937
Sau96I GGNCC 2 cut(s) 187, 604
ScrFI CCNGG 3 cut(s) 421, 528, 1197
SduI GDGCHC 3 cut(s) 129, 442, 955
SfaNI GCATC 5 cut(s) 232, 475, 568, 695, 1201
SinI GGWCC 1 cut(s) 604
SmlI CTYRAG 1 cut(s) 1298
SmoI CTYRAG 1 cut(s) 1298
Sse9I AATT 6 cut(s) 531, 563, 653, 844, 933, 975
SspMI CTAG 3 cut(s) 471, 1160, 1292
SstI GAGCTC 1 cut(s) 129
StyD4I CCNGG 3 cut(s) 419, 526, 1195
StyI CCWWGG 3 cut(s) 183, 778, 1176
TaaI ACNGT 5 cut(s) 322, 336, 411, 444, 1025
TaiI ACGT 2 cut(s) 162, 1405
TaqI TCGA 5 cut(s) 129, 230, 240, 567, 628
TasI AATT 6 cut(s) 531, 563, 653, 844, 933, 975
TatI WGTACW 1 cut(s) 1007
TauI GCSGC 2 cut(s) 208, 258
TfiI GAWTC 5 cut(s) 35, 47, 169, 1028, 1200
Tru1I TTAA 4 cut(s) 339, 680, 804, 1329
Tru9I TTAA 4 cut(s) 339, 680, 804, 1329
TscAI CASTG 2 cut(s) 1030, 1324
TseFI GTSAC 4 cut(s) 304, 514, 820, 1034
TseI GCWGC 4 cut(s) 689, 957, 1103, 1214
Tsp45I GTSAC 4 cut(s) 304, 514, 820, 1034
TspDTI ATGAA 3 cut(s) 420, 646, 1101
TspGWI ACGGA 2 cut(s) 323, 1323
TspRI CASTG 2 cut(s) 1030, 1324
VneI GTGCAC 1 cut(s) 438
VpaK11BI GGWCC 1 cut(s) 604
XapI RAATTY 1 cut(s) 563
XcmI CCANNNNNNNNNTGG 1 cut(s) 785
XmnI GAANNNNTTC 1 cut(s) 648
XspI CTAG 3 cut(s) 471, 1160, 1292
Zsp2I ATGCAT 2 cut(s) 710, 1005
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.