Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6C

Orthogroup ID

OG0014063

Physical Location & Seq

Genomic Coordinates Reverse (-)

60470315 .. 60473049

Gene Structure 2735 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG421500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1578 bp

ATGGCTTCTACTTCCTCCTTAGCTTTCCCTTCTCTGCAGCTACAATTCCAAACACCACGCAAGTCATTCCCATCCACTCGCCGTATTTTCCTCCGTCCGATCTGCGCATCCGTCTCGGAGAAGTCATCGTCTTCATCCTCCTCCATCTCATCACAACCCGCAGAGCCAACCAAGCTTCCTTTGAGGAAAATCCCCGGCGACTATGGCCTTCCCTTCGTGGGTCCCCTCAAGGATCGCCAGGACTACTTCTACAACCAAGGCCGGGAGGAGTTCTTCAAGTCTCGTATCCAGAAGCACCAGTCCACCGTGTTCAGAGTCAACATGCCACCTGGCCCCTTCATCACCACCAAATCCCAGGTCGTCGTCTTGCTCGACGGCAAGAGCTTCCCGGTCCTCTTTGACGTTTCCAAGGTCGAAAAGAAAGACCTCTTCACCGGCACCTACATGCCCTCATTGGAGCTCACCGGCGGTTACAGAATTCTCTCCTACCTCGACCCCTCGGAGCCCAAGCACGACAAGCTCAAGCGTGTAATGTTCTATCTCCTAAAGTCTGGTATTAAGTCTGTGATCCCTGAGTTCCACTCAAGCTACGCCGAGTTTTTTGAAACTCTGGAAACCAAGCTCGCTGATAATGGTAAAGCCAGCTTCAACGAGGCCAACGATCAAGCAGCTTTCAATTTCTTGGCTCGCTCACTCTACGGTGCTAATCCGGCCGATACCCAACTCGGCACCGACGGTCCTAAATTGGTCCAGAAATGGGTTCTATTCCAACTGAGTCCGATTCTAGTTCTTGGTCTACCAAAATTCATTGAAGATCCTCTGTTTCACACCTTCCCTCTCCCACCGTTTTTGGTCAAGAAAGACTACCAGAGACTCTACGACTTCTTCTACCAGTCATCCGGCCACGTGCTCGACGAGGCAGAGAGGCTGGGAGTGTCCAGAGACGAAGCGTGTCACAACCTGTTGTTCGCCACGTGTTTCAACTCATTCGGAGGCATGAAGCTTTTATTTCCCAGCATGCTCAAGTGGATCGGCCGCGCCGGGGCCAAACTCCACAGCGAACTAGCGCAGGAGATCCGCTCGGCCGTCAGATCCAACGGCGGGAAAATCACCATGTCCGCCATGGAGCAAATGCCGTTGATGAAGTCTGTGGTGTACGAAGCTTTCCGGATCGAGCCACCGGTTCCTCTACAGTACGGTAGGGCAAAGACTGACCTAGTCATCGAGAGCCACGACGCGGCGTTTAAGGTGAAAGAAGGCGAGATGTTATTTGGGTTCCAACCTTTTGCGACCAAGGACCCCAAAATCTTCGAAAAAGCCGCGGAGTTTGTGCCGGACAGGTTTGTCGGTGAAGAAGGGGAGAAGTTGTTACAGCATGTGCTTTGGTCCAACGGTCCCGAGACGGAAACTCCGACGGTCGGGAACAAACAGTGTGCCGGAAAAGACTTCGTCATGTTGGCGTCAAGGCTGTTGGTGGTGGAGTTTTTTCTCCGATATGATTCGTTCGAGATTGAAGTTGCTGCTTCGCCTTTGGGAGCTGCCATTACCATGACCTCGCTCAAAAGAGCTAGCTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0001676 GO:0003674 GO:0003824 GO:0004497 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006082 GO:0006629 GO:0006631 GO:0006690 GO:0006950 GO:0006952 GO:0008144 GO:0008150 GO:0008152 GO:0008202 GO:0009058 GO:0009507 GO:0009526 GO:0009532 GO:0009534 GO:0009535 GO:0009536 GO:0009570 GO:0009579 GO:0009605 GO:0009607 GO:0009611 GO:0009620 GO:0009694 GO:0009695 GO:0009719 GO:0009725 GO:0009753 GO:0009941 GO:0009978 GO:0009987 GO:0010033 GO:0010287 GO:0010817 GO:0016020 GO:0016053 GO:0016125 GO:0016491 GO:0016829 GO:0016835 GO:0016836 GO:0019369 GO:0019373 GO:0019752 GO:0019825 GO:0031407 GO:0031967 GO:0031975 GO:0031976 GO:0031984 GO:0032787 GO:0033559 GO:0034357 GO:0036094 GO:0042221 GO:0042445 GO:0042446 GO:0042651 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0055035 GO:0055114 GO:0065007 GO:0065008 GO:0071704 GO:0072330 GO:0098542 GO:1901360 GO:1901568 GO:1901576 GO:1901615 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00592 ko01100 ko01110 map00592 map01100 map01110

Pfam Domains

Protein Families

p450

Protein Analysis

525

Amino Acids

58.96

Weight (kDa)

8.83

Isoelectric Point (pI)

50.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	353 - 500	7.5e-16	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0014063)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G42650
fragaria_vesca	FvH4_2g40510
malus_domestica	MD00G1038400.v1.1 MD08G1038600.v1.1
prunus_persica	Prupe.1G386300_v2.0.a1
pyrus_communis	pycom08g03050 pycom15g03000
rosa_chinensis	RchiOBHm_Chr6g0300221
rosa_laevigata	RLG00000011356
rosa_multiflora	Rmu_sc0001670.1_g000032
rosa_roxburghii	Rroxscaffold_7G00168000
rosa_rugosa	Rorug06G0294200
rosa_samantha	Rh6AG406400 Rh6BG414300 Rh6CG421500 Rh6DG407100
rosa_wichuraiana	Rw6G035560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1343
Acc16I	TGCGCA	1 cut(s)	106
AccB1I	GGYRCC	2 cut(s)	437, 728
AccBSI	CCGCTC	1 cut(s)	1080
AccI	GTMKAC	1 cut(s)	796
AccII	CGCG	3 cut(s)	1038, 1238, 1322
AccIII	TCCGGA	1 cut(s)	1167
AciI	CCGC	9 cut(s)	159, 468, 1036, 1078, 1101, 1119, 1238, 1320, 1322
AclWI	GGATC	7 cut(s)	240, 562, 809, 1037, 1069, 1086, 1178
AcoI	YGGCCR	4 cut(s)	711, 901, 1033, 1083
AcsI	RAATTY	2 cut(s)	477, 803
AcvI	CACGTG	2 cut(s)	907, 975
AcyI	GRCGYC	1 cut(s)	1460
AfaI	GTAC	2 cut(s)	1157, 1196
AfiI	CCNNNNNNNGG	7 cut(s)	218, 262, 757, 1042, 1101, 1237, 1418
AflIII	ACRYGT	1 cut(s)	974
AgeI	ACCGGT	1 cut(s)	1180
AgsI	TTSAA	7 cut(s)	277, 605, 649, 676, 812, 982, 1514
AjnI	CCWGG	3 cut(s)	237, 328, 354
Alw21I	GWGCWC	2 cut(s)	462, 912
Alw26I	GTCTC	5 cut(s)	118, 285, 865, 936, 1394
AlwI	GGATC	7 cut(s)	240, 562, 809, 1037, 1069, 1086, 1178
Ama87I	CYCGRG	1 cut(s)	1397
Aor13HI	TCCGGA	1 cut(s)	1167
AoxI	GGCC	9 cut(s)	205, 259, 331, 654, 711, 901, 1033, 1044, 1083
ApeKI	GCWGC	4 cut(s)	37, 668, 1520, 1538
ApoI	RAATTY	2 cut(s)	477, 803
ArsI	GACNNNNNNTTYG	2 cut(s)	342, 374
AsiGI	ACCGGT	1 cut(s)	1180
AspLEI	GCGC	3 cut(s)	107, 1040, 1069
AspS9I	GGNCC	9 cut(s)	221, 332, 391, 737, 748, 1044, 1297, 1386, 1394
AsuC2I	CCSGG	4 cut(s)	195, 263, 389, 1042
AsuHPI	GGTGA	6 cut(s)	334, 424, 454, 1102, 1261, 1361
AsuII	TTCGAA	1 cut(s)	1311
AsuNHI	GCTAGC	1 cut(s)	1568
AvaI	CYCGRG	1 cut(s)	1397
AvaII	GGWCC	7 cut(s)	221, 391, 737, 748, 1297, 1386, 1394
BanI	GGYRCC	2 cut(s)	437, 728
BanII	GRGCYC	2 cut(s)	462, 507
BbrPI	CACGTG	2 cut(s)	907, 975
BbsI	GAAGAC	1 cut(s)	123
Bbv12I	GWGCWC	2 cut(s)	462, 912
BbvI	GCAGC	4 cut(s)	49, 680, 1507, 1525
BccI	CCATC	2 cut(s)	79, 152
BceAI	ACGGC	5 cut(s)	66, 391, 1070, 1114, 1120
BcgI	CGANNNNNNTGC	2 cut(s)	96, 130
BciT130I	CCWGG	3 cut(s)	239, 330, 356
BciVI	GTATCC	1 cut(s)	296
BcnI	CCSGG	4 cut(s)	195, 263, 389, 1042
BcoDI	GTCTC	5 cut(s)	118, 285, 865, 936, 1394
BfaI	CTAG	4 cut(s)	785, 1064, 1217, 1569
BfmI	CTRYAG	2 cut(s)	35, 1190
BfuI	GTATCC	1 cut(s)	296
BisI	GCNGC	7 cut(s)	38, 669, 1036, 1239, 1320, 1521, 1539
BlsI	GCNGC	7 cut(s)	39, 670, 1037, 1240, 1321, 1522, 1540
Bme1390I	CCNGG	7 cut(s)	195, 239, 263, 330, 356, 389, 1042
Bme18I	GGWCC	7 cut(s)	221, 391, 737, 748, 1297, 1386, 1394
BmeT110I	CYCGRG	1 cut(s)	1397
BmgT120I	GGNCC	9 cut(s)	221, 332, 391, 737, 748, 1044, 1297, 1386, 1394
BmrFI	CCNGG	7 cut(s)	195, 239, 263, 330, 356, 389, 1042
BmsI	GCATC	1 cut(s)	116
BmtI	GCTAGC	1 cut(s)	1572
BpiI	GAAGAC	1 cut(s)	123
BplI	GAGNNNNNCTC	4 cut(s)	566, 598, 1064, 1096
Bpu10I	CCTNAGC	1 cut(s)	19
Bpu14I	TTCGAA	1 cut(s)	1311
BpuEI	CTTGAG	4 cut(s)	212, 506, 568, 1007
BpuMI	CCSGG	4 cut(s)	195, 263, 389, 1042
BsaAI	YACGTR	2 cut(s)	907, 975
BsaHI	GRCGYC	1 cut(s)	1460
BsaJI	CCNNGG	9 cut(s)	193, 256, 354, 408, 498, 1041, 1122, 1293, 1320
BsaWI	WCCGGW	2 cut(s)	1167, 1180
BsaXI	ACNNNNNCTCC	4 cut(s)	1352, 1382, 1393, 1423
Bsc4I	CCNNNNNNNGG	7 cut(s)	218, 262, 757, 1042, 1101, 1237, 1418
Bse118I	RCCGGY	3 cut(s)	434, 464, 1180
Bse1I	ACTGG	2 cut(s)	298, 892
BseAI	TCCGGA	1 cut(s)	1167
BseBI	CCWGG	3 cut(s)	239, 330, 356
BseDI	CCNNGG	9 cut(s)	193, 256, 354, 408, 498, 1041, 1122, 1293, 1320
BseGI	GGATG	4 cut(s)	71, 107, 134, 896
BseLI	CCNNNNNNNGG	7 cut(s)	218, 262, 757, 1042, 1101, 1237, 1418
BseMII	CTCAG	2 cut(s)	564, 764
BseNI	ACTGG	2 cut(s)	298, 892
BseRI	GAGGAG	2 cut(s)	130, 281
BseX3I	CGGCCG	3 cut(s)	711, 1033, 1083
BseXI	GCAGC	4 cut(s)	49, 680, 1507, 1525
BseYI	CCCAGC	2 cut(s)	928, 1013
Bsh1236I	CGCG	3 cut(s)	1038, 1238, 1322
Bsh1285I	CGRYCG	4 cut(s)	714, 1036, 1086, 1419
BshFI	GGCC	9 cut(s)	207, 261, 333, 656, 713, 903, 1035, 1046, 1085
BshNI	GGYRCC	2 cut(s)	437, 728
BshTI	ACCGGT	1 cut(s)	1180
BsiEI	CGRYCG	4 cut(s)	714, 1036, 1086, 1419
BsiHKAI	GWGCWC	2 cut(s)	462, 912
BsiHKCI	CYCGRG	1 cut(s)	1397
BslFI	GGGAC	2 cut(s)	207, 1380
BslI	CCNNNNNNNGG	7 cut(s)	218, 262, 757, 1042, 1101, 1237, 1418
BsmAI	GTCTC	5 cut(s)	118, 285, 865, 936, 1394
BsmBI	CGTCTC	3 cut(s)	118, 936, 1394
BsmFI	GGGAC	2 cut(s)	207, 1380
BsnI	GGCC	9 cut(s)	207, 261, 333, 656, 713, 903, 1035, 1046, 1085
BsoBI	CYCGRG	1 cut(s)	1397
Bsp119I	TTCGAA	1 cut(s)	1311
Bsp1286I	GDGCHC	3 cut(s)	462, 507, 912
Bsp13I	TCCGGA	1 cut(s)	1167
Bsp143I	GATC	9 cut(s)	99, 232, 567, 661, 814, 1029, 1074, 1091, 1170
Bsp19I	CCATGG	1 cut(s)	1122
BspACI	CCGC	9 cut(s)	159, 468, 1036, 1078, 1101, 1119, 1238, 1320, 1322
BspANI	GGCC	9 cut(s)	207, 261, 333, 656, 713, 903, 1035, 1046, 1085
BspCNI	CTCAG	2 cut(s)	565, 765
BspEI	TCCGGA	1 cut(s)	1167
BspFNI	CGCG	3 cut(s)	1038, 1238, 1322
BspMAI	CTGCAG	1 cut(s)	39
BspOI	GCTAGC	1 cut(s)	1572
BspPI	GGATC	7 cut(s)	240, 562, 809, 1037, 1069, 1086, 1178
BspT104I	TTCGAA	1 cut(s)	1311
BspT107I	GGYRCC	2 cut(s)	437, 728
BsrBI	CCGCTC	1 cut(s)	1080
BsrFI	RCCGGY	3 cut(s)	434, 464, 1180
BsrI	ACTGG	2 cut(s)	298, 892
BssAI	RCCGGY	3 cut(s)	434, 464, 1180
BssECI	CCNNGG	9 cut(s)	193, 256, 354, 408, 498, 1041, 1122, 1293, 1320
BssMI	GATC	9 cut(s)	99, 232, 567, 661, 814, 1029, 1074, 1091, 1170
BssNI	GRCGYC	1 cut(s)	1460
BssT1I	CCWWGG	4 cut(s)	256, 408, 1122, 1293
Bst2UI	CCWGG	3 cut(s)	239, 330, 356
Bst4CI	ACNGT	9 cut(s)	307, 701, 737, 846, 1194, 1199, 1394, 1417, 1431
Bst6I	CTCTTC	1 cut(s)	434
BstACI	GRCGYC	1 cut(s)	1460
BstBAI	YACGTR	2 cut(s)	907, 975
BstBI	TTCGAA	1 cut(s)	1311
BstC8I	GCNNGC	5 cut(s)	624, 643, 688, 1019, 1570
BstDEI	CTNAG	3 cut(s)	19, 573, 773
BstDSI	CCRYGG	2 cut(s)	1122, 1320
BstF5I	GGATG	4 cut(s)	71, 107, 134, 896
BstFNI	CGCG	3 cut(s)	1038, 1238, 1322
BstHHI	GCGC	3 cut(s)	107, 1040, 1069
BstKTI	GATC	9 cut(s)	102, 235, 570, 664, 817, 1032, 1077, 1094, 1173
BstMAI	GTCTC	5 cut(s)	118, 285, 865, 936, 1394
BstMBI	GATC	9 cut(s)	99, 232, 567, 661, 814, 1029, 1074, 1091, 1170
BstMCI	CGRYCG	4 cut(s)	714, 1036, 1086, 1419
BstMWI	GCNNNNNNNGC	4 cut(s)	172, 204, 517, 710
BstNI	CCWGG	3 cut(s)	239, 330, 356
BstNSI	RCATGY	4 cut(s)	325, 448, 1021, 1379
BstSCI	CCNGG	7 cut(s)	193, 237, 261, 328, 354, 387, 1040
BstSFI	CTRYAG	2 cut(s)	35, 1190
BstUI	CGCG	3 cut(s)	1038, 1238, 1322
BstV1I	GCAGC	4 cut(s)	49, 680, 1507, 1525
BstV2I	GAAGAC	1 cut(s)	123
BstX2I	RGATCY	3 cut(s)	814, 1074, 1091
BstYI	RGATCY	3 cut(s)	814, 1074, 1091
BstZI	CGGCCG	3 cut(s)	711, 1033, 1083
BsuI	GTATCC	1 cut(s)	296
BsuRI	GGCC	9 cut(s)	207, 261, 333, 656, 713, 903, 1035, 1046, 1085
BtgI	CCRYGG	2 cut(s)	1122, 1320
BtsCI	GGATG	4 cut(s)	71, 107, 134, 896
BtsIMutI	CAGTG	1 cut(s)	1436
Cac8I	GCNNGC	5 cut(s)	624, 643, 688, 1019, 1570
CfoI	GCGC	3 cut(s)	107, 1040, 1069
Cfr10I	RCCGGY	3 cut(s)	434, 464, 1180
Cfr13I	GGNCC	9 cut(s)	221, 332, 391, 737, 748, 1044, 1297, 1386, 1394
Cfr42I	CCGCGG	1 cut(s)	1323
CseI	GACGC	2 cut(s)	1244, 1449
Csp6I	GTAC	2 cut(s)	1156, 1195
CspAI	ACCGGT	1 cut(s)	1180
CspCI	CAANNNNNGTGG	2 cut(s)	831, 866
CviAII	CATG	9 cut(s)	322, 445, 997, 1018, 1114, 1123, 1376, 1453, 1549
CviQI	GTAC	2 cut(s)	1156, 1195
DdeI	CTNAG	3 cut(s)	19, 573, 773
DpnI	GATC	9 cut(s)	101, 234, 569, 663, 816, 1031, 1076, 1093, 1172
DpnII	GATC	9 cut(s)	99, 232, 567, 661, 814, 1029, 1074, 1091, 1170
DrdI	GACNNNNNNGTC	1 cut(s)	1343
DseDI	GACNNNNNNGTC	1 cut(s)	1343
EaeI	YGGCCR	4 cut(s)	711, 901, 1033, 1083
EagI	CGGCCG	3 cut(s)	711, 1033, 1083
Eam1104I	CTCTTC	1 cut(s)	434
EarI	CTCTTC	1 cut(s)	434
EciI	GGCGGA	1 cut(s)	1108
Ecl136II	GAGCTC	1 cut(s)	460
EclXI	CGGCCG	3 cut(s)	711, 1033, 1083
Eco130I	CCWWGG	4 cut(s)	256, 408, 1122, 1293
Eco24I	GRGCYC	2 cut(s)	462, 507
Eco47I	GGWCC	7 cut(s)	221, 391, 737, 748, 1297, 1386, 1394
Eco52I	CGGCCG	3 cut(s)	711, 1033, 1083
Eco53kI	GAGCTC	1 cut(s)	460
Eco72I	CACGTG	2 cut(s)	907, 975
Eco88I	CYCGRG	1 cut(s)	1397
EcoICRI	GAGCTC	1 cut(s)	460
EcoO109I	RGGNCCY	2 cut(s)	221, 1297
EcoRI	GAATTC	1 cut(s)	477
EcoRII	CCWGG	3 cut(s)	237, 328, 354
EcoT14I	CCWWGG	4 cut(s)	256, 408, 1122, 1293
EcoT38I	GRGCYC	2 cut(s)	462, 507
ErhI	CCWWGG	4 cut(s)	256, 408, 1122, 1293
Esp3I	CGTCTC	3 cut(s)	118, 936, 1394
FaeI	CATG	9 cut(s)	325, 448, 1000, 1021, 1117, 1126, 1379, 1456, 1552
FaqI	GGGAC	2 cut(s)	207, 1380
FatI	CATG	9 cut(s)	321, 444, 996, 1017, 1113, 1122, 1375, 1452, 1548
FauI	CCCGC	2 cut(s)	166, 1094
FblI	GTMKAC	1 cut(s)	796
Fnu4HI	GCNGC	7 cut(s)	38, 669, 1036, 1239, 1320, 1521, 1539
FokI	GGATG	4 cut(s)	58, 94, 121, 883
FriOI	GRGCYC	2 cut(s)	462, 507
Fsp4HI	GCNGC	7 cut(s)	38, 669, 1036, 1239, 1320, 1521, 1539
FspBI	CTAG	4 cut(s)	785, 1064, 1217, 1569
FspI	TGCGCA	1 cut(s)	106
GlaI	GCGC	3 cut(s)	106, 1039, 1068
GluI	GCNGC	7 cut(s)	38, 669, 1036, 1239, 1320, 1521, 1539
GsaI	CCCAGC	2 cut(s)	932, 1017
HaeIII	GGCC	9 cut(s)	207, 261, 333, 656, 713, 903, 1035, 1046, 1085
HgaI	GACGC	2 cut(s)	1244, 1449
HhaI	GCGC	3 cut(s)	107, 1040, 1069
Hin1I	GRCGYC	1 cut(s)	1460
Hin1II	CATG	9 cut(s)	325, 448, 1000, 1021, 1117, 1126, 1379, 1456, 1552
Hin6I	GCGC	3 cut(s)	105, 1038, 1067
HinP1I	GCGC	3 cut(s)	105, 1038, 1067
HincII	GTYRAC	1 cut(s)	319
HindII	GTYRAC	1 cut(s)	319
HindIII	AAGCTT	3 cut(s)	173, 1001, 1161
HinfI	GANTC	5 cut(s)	315, 775, 781, 873, 1499
HphI	GGTGA	6 cut(s)	334, 424, 454, 1102, 1261, 1361
Hpy166II	GTNNAC	4 cut(s)	303, 319, 797, 1156
Hpy188I	TCNGA	9 cut(s)	99, 118, 314, 502, 780, 992, 1091, 1413, 1493
Hpy8I	GTNNAC	4 cut(s)	303, 319, 797, 1156
Hpy99I	CGWCG	6 cut(s)	365, 377, 737, 917, 1238, 1417
HpyAV	CCTTC	7 cut(s)	39, 218, 223, 346, 841, 1250, 1349
HpyCH4III	ACNGT	9 cut(s)	307, 701, 737, 846, 1194, 1199, 1394, 1417, 1431
HpyCH4IV	ACGT	3 cut(s)	402, 906, 974
HpyCH4V	TGCA	1 cut(s)	37
HpyF10VI	GCNNNNNNNGC	4 cut(s)	172, 204, 517, 710
HpyF3I	CTNAG	3 cut(s)	19, 573, 773
HpySE526I	ACGT	3 cut(s)	402, 906, 974
Hsp92I	GRCGYC	1 cut(s)	1460
Hsp92II	CATG	9 cut(s)	325, 448, 1000, 1021, 1117, 1126, 1379, 1456, 1552
HspAI	GCGC	3 cut(s)	105, 1038, 1067
KflI	GGGWCCC	1 cut(s)	221
Kpn2I	TCCGGA	1 cut(s)	1167
KspI	CCGCGG	1 cut(s)	1323
Kzo9I	GATC	9 cut(s)	99, 232, 567, 661, 814, 1029, 1074, 1091, 1170
LmnI	GCTCC	4 cut(s)	457, 502, 1126, 1535
Lsp1109I	GCAGC	4 cut(s)	49, 680, 1507, 1525
LweI	GCATC	1 cut(s)	116
MaeI	CTAG	4 cut(s)	785, 1064, 1217, 1569
MaeII	ACGT	3 cut(s)	402, 906, 974
MaeIII	GTNAC	3 cut(s)	470, 953, 1368
MalI	GATC	9 cut(s)	101, 234, 569, 663, 816, 1031, 1076, 1093, 1172
MbiI	CCGCTC	1 cut(s)	1080
MboI	GATC	9 cut(s)	99, 232, 567, 661, 814, 1029, 1074, 1091, 1170
MboII	GAAGA	7 cut(s)	123, 265, 421, 824, 877, 1300, 1364
MflI	RGATCY	3 cut(s)	814, 1074, 1091
MhlI	GDGCHC	3 cut(s)	462, 507, 912
MluCI	AATT	5 cut(s)	44, 477, 676, 743, 803
MlyI	GAGTC	3 cut(s)	324, 784, 867
MmeI	TCCRAC	5 cut(s)	793, 1119, 1303, 1413, 1436
MroI	TCCGGA	1 cut(s)	1167
MseI	TTAA	2 cut(s)	558, 1245
MslI	CAYNNNNRTG	2 cut(s)	443, 1547
MspA1I	CMGCKG	1 cut(s)	1322
MspR9I	CCNGG	7 cut(s)	195, 239, 263, 330, 356, 389, 1042
MvaI	CCWGG	3 cut(s)	239, 330, 356
MvnI	CGCG	3 cut(s)	1038, 1238, 1322
MwoI	GCNNNNNNNGC	4 cut(s)	172, 204, 517, 710
NciI	CCSGG	4 cut(s)	195, 263, 389, 1042
NcoI	CCATGG	1 cut(s)	1122
NdeII	GATC	9 cut(s)	99, 232, 567, 661, 814, 1029, 1074, 1091, 1170
NheI	GCTAGC	1 cut(s)	1568
NlaIII	CATG	9 cut(s)	325, 448, 1000, 1021, 1117, 1126, 1379, 1456, 1552
NmeAIII	GCCGAG	3 cut(s)	619, 705, 1061
NmuCI	GTSAC	1 cut(s)	953
NsbI	TGCGCA	1 cut(s)	106
NspI	RCATGY	4 cut(s)	325, 448, 1021, 1379
NspV	TTCGAA	1 cut(s)	1311
PaeI	GCATGC	1 cut(s)	1021
PcsI	WCGNNNNNNNCGW	5 cut(s)	369, 657, 912, 1230, 1409
PfeI	GAWTC	2 cut(s)	781, 1499
PflFI	GACNNNGTC	2 cut(s)	1217, 1448
PinAI	ACCGGT	1 cut(s)	1180
PkrI	GCNGC	7 cut(s)	39, 670, 1037, 1240, 1321, 1522, 1540
PleI	GAGTC	3 cut(s)	323, 783, 867
PmaCI	CACGTG	2 cut(s)	907, 975
PmlI	CACGTG	2 cut(s)	907, 975
PpsI	GAGTC	3 cut(s)	323, 783, 867
Ppu21I	YACGTR	2 cut(s)	907, 975
PpuMI	RGGWCCY	2 cut(s)	221, 1297
Psp124BI	GAGCTC	1 cut(s)	462
Psp5II	RGGWCCY	2 cut(s)	221, 1297
Psp6I	CCWGG	3 cut(s)	237, 328, 354
PspCI	CACGTG	2 cut(s)	907, 975
PspFI	CCCAGC	2 cut(s)	928, 1013
PspGI	CCWGG	3 cut(s)	237, 328, 354
PspPI	GGNCC	9 cut(s)	221, 332, 391, 737, 748, 1044, 1297, 1386, 1394
PspPPI	RGGWCCY	2 cut(s)	221, 1297
PstI	CTGCAG	1 cut(s)	39
PsuI	RGATCY	3 cut(s)	814, 1074, 1091
PsyI	GACNNNGTC	2 cut(s)	1217, 1448
RsaI	GTAC	2 cut(s)	1157, 1196
RsaNI	GTAC	2 cut(s)	1156, 1195
RseI	CAYNNNNRTG	2 cut(s)	443, 1547
SacI	GAGCTC	1 cut(s)	462
SacII	CCGCGG	1 cut(s)	1323
SaqAI	TTAA	2 cut(s)	558, 1245
SatI	GCNGC	7 cut(s)	38, 669, 1036, 1239, 1320, 1521, 1539
Sau3AI	GATC	9 cut(s)	99, 232, 567, 661, 814, 1029, 1074, 1091, 1170
Sau96I	GGNCC	9 cut(s)	221, 332, 391, 737, 748, 1044, 1297, 1386, 1394
SchI	GAGTC	3 cut(s)	324, 784, 867
ScrFI	CCNGG	7 cut(s)	195, 239, 263, 330, 356, 389, 1042
SduI	GDGCHC	3 cut(s)	462, 507, 912
SfaNI	GCATC	1 cut(s)	116
SfcI	CTRYAG	2 cut(s)	35, 1190
Sfr303I	CCGCGG	1 cut(s)	1323
SfuI	TTCGAA	1 cut(s)	1311
SgrAI	CRCCGGYG	1 cut(s)	464
SgrBI	CCGCGG	1 cut(s)	1323
SinI	GGWCC	7 cut(s)	221, 391, 737, 748, 1297, 1386, 1394
SmiMI	CAYNNNNRTG	2 cut(s)	443, 1547
SmlI	CTYRAG	4 cut(s)	227, 521, 583, 1022
SmoI	CTYRAG	4 cut(s)	227, 521, 583, 1022
SphI	GCATGC	1 cut(s)	1021
Sse9I	AATT	5 cut(s)	44, 477, 676, 743, 803
SsiI	CCGC	9 cut(s)	159, 468, 1036, 1078, 1101, 1119, 1238, 1320, 1322
SspMI	CTAG	4 cut(s)	785, 1064, 1217, 1569
SstI	GAGCTC	1 cut(s)	462
StyD4I	CCNGG	7 cut(s)	193, 237, 261, 328, 354, 387, 1040
StyI	CCWWGG	4 cut(s)	256, 408, 1122, 1293
TaaI	ACNGT	9 cut(s)	307, 701, 737, 846, 1194, 1199, 1394, 1417, 1431
TaiI	ACGT	3 cut(s)	405, 909, 977
TaqI	TCGA	8 cut(s)	372, 414, 492, 912, 1173, 1224, 1311, 1506
TasI	AATT	5 cut(s)	44, 477, 676, 743, 803
TauI	GCSGC	3 cut(s)	1038, 1241, 1322
TfiI	GAWTC	2 cut(s)	781, 1499
Tru1I	TTAA	2 cut(s)	558, 1245
Tru9I	TTAA	2 cut(s)	558, 1245
TscAI	CASTG	1 cut(s)	1436
TseFI	GTSAC	1 cut(s)	953
TseI	GCWGC	4 cut(s)	37, 668, 1520, 1538
Tsp45I	GTSAC	1 cut(s)	953
TspDTI	ATGAA	5 cut(s)	123, 328, 796, 1013, 1157
TspGWI	ACGGA	3 cut(s)	83, 100, 1418
TspRI	CASTG	1 cut(s)	1436
Tth111I	GACNNNGTC	2 cut(s)	1217, 1448
VpaK11BI	GGWCC	7 cut(s)	221, 391, 737, 748, 1297, 1386, 1394
XapI	RAATTY	2 cut(s)	477, 803
XceI	RCATGY	4 cut(s)	325, 448, 1021, 1379
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1120
XmiI	GTMKAC	1 cut(s)	796
XspI	CTAG	4 cut(s)	785, 1064, 1217, 1569

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.