Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0014667

Physical Location & Seq

Genomic Coordinates Forward (+)

57047104 .. 57049351

Gene Structure 2248 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG375800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1896 bp

ATGTGCAGCAAAACCTTCACATTCTGCTCCCTTGTCTTCCTCATCTTCATCACTCTCAACACTGTTGCAGCTGCTGCTTCATCATGCCCCATAGATCTGAGCTACGTCAAAACCTTCCCATGGGACACCTCCCTCTGCCTCGCCCCGAACGGCACACACTGCTGCCAGACCCTCCTCAGCCTCTTCGGCATAGGCCTGGCCCAACACCTCAAGCGAACCTCCATGTTCCAGCTCCCCAACTCCACCGCCTCCGCCGCTTGCCTATCTGATTTCCAGTCCAAGCTCTCATCTTTGTCCCTCCAGCCCACCCTAGTCCCCCTCTGCTTCCAGAACACCACTCAGTTTGTCTCCAACCCCGCCAGCTGTGCCGGAATCCTCACCGTCCAGGACTGGACGGAAAAGGTGGGGGCCATCAGCGCTATAGACACATCGTGCAAGGGAGATCTGGAGGGGCTCACCAAGTGCAGCTCTTGCCTTGATGCAGGGTTGAGTGTGACTAACTTGTTGAGCGGGTTGGGCCCAAACAGCACCAAATGTTTCTACTTTACTGTGTTGTATGCTGCAGGGATTGTGAATCAGTTGGGTCCTGATGATCCAAGAACTGGGGCTTGCATTCTGGGCTTGCCTCTGTCCACCTCAGCTGACAAGAAGAGTTCAAGTCAGGTGAGCAGGAAGACTCTGCTAAAATGGGTGTTTGGGGTTTTGGGGGCTATTCTTGGGATTTTGCTTGCTGTTGGGGTAATAGTCATGTACAGGAGGTTTGACTTGAAAGGGAGGCAAAATGCTAGGCATGAAGAGTACGTGAGTAGCTTTAGAGCTAGTTTGTTGCCTAATTCTGGTGCAAAGTGGTTTGGGATTTCGGAGCTTGAGAGAGCCACTGATGGGTTCTCTCAGAAGAACATGATAGGCCAAGGTGGGTATGGGGTTGTGTACAAGGGCACACTTGCTGATGGGACTCTTGTTGCAGTGAAGCAAATTCTTGATATGGAGTCTTTGGATTCGAAAGGGGATGAGGAGTTTTCAAATGAGGTAGAGATTATAAGCAAAATCCGGCATAGGAATCTGCTCTCGCTTAGAGGGTGTTGTGTTACTAGCGATGATTTTAAAGGGAAAAGGAGGTTCTTGGTTTATGATCTCATGTCAAATGGGAATCTGAGTGACCACTTGAGCAATAGTAATAGGAGATTGAGTTGGCCTCAGAGAAAGAGTATAATACTTGATGTTGCAAAGGGGCTTGTTTACTTGCACAATGGGATCAAGCCTGCTATTTATCACAGGGACATAAAAGGGACTAACATACTCTTGGACTCGGAAATGAAGGCGAAAGTTGCAGATTTTGGTTTGGCCAAGCAAAGTTCAGAGGGGCATACTCACTTGACAACAAGAGTTGCTGGCACTTACGGTTATTTGGCACCTGAATATGCGCTCTATGGACAGCTTACGGAGAAGAGCGATGTTTACAGCTTCGGCATTGTGATTCTTGAGATCATGAGTGGGAGGAAAGTGCTGGACACATCGAATTCTAGCACGAATTTGAATTCGGTTGTTTTGATCACGGATTGGGCGTGGATGCATACGAAAGCAGGGAGTTTGGAGGAGGTTTTTGATGAAACATTAAGGGAGGAAGGACCAAAGAGTGTTATGGAGAGGTTTGTGAATGTTGGGATTCTTTGTGCTCATGTTATGGTGGCTTTTAGGCCTACCATTTCAGAAGCACTGAGGATGTTGGAGGGTGATATTGATATTCCTGAACTACCAGATAGGCCAATGCCACTTGGGAATGAGTCTTATAGATCTTCTTTTGGGTTTTCTACCATTCTGGAAAGTGAAAGATCAAGACCCAGCTTTAGTTCAAGCACTGTAACTCCGAGTCCCCAACATAGATTGAAGATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

631

Amino Acids

68.93

Weight (kDa)

8.04

Isoelectric Point (pI)

39.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SPARK	PF19160	25 - 180	6.5e-42	SPARK
Pkinase	PF00069	297 - 572	2e-45	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	298 - 574	2.8e-44	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014667)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g27700
malus_domestica	MD00G1063500.v1.1 MD15G1343400.v1.1
prunus_persica	Prupe.1G490800_v2.0.a1
pyrus_communis	pycom15g30600 pycom15g30610
rosa_chinensis	RchiOBHm_Chr6g0296571
rosa_laevigata	RLG00000011681
rosa_multiflora	Rmu_sc0001741.1_g000023 Rmu_sc0041908.1_g000001
rosa_roxburghii	Rroxscaffold_7G00171430 Rroxscaffold_7G00178690
rosa_rugosa	Rorug06G0263200
rosa_samantha	Rh6AG374900 Rh6CG388400 Rh6DG375800
rosa_wichuraiana	Rw6G032680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1040
AccB1I	GGYRCC	1 cut(s)	1411
AccB7I	CCANNNNNTGG	1 cut(s)	602
AccBSI	CCGCTC	1 cut(s)	510
AciI	CCGC	5 cut(s)	246, 252, 255, 357, 510
AclWI	GGATC	2 cut(s)	587, 1262
AcoI	YGGCCR	1 cut(s)	1344
AcsI	RAATTY	4 cut(s)	975, 1519, 1531, 1537
AdeI	CACNNNGTG	2 cut(s)	432, 462
AfaI	GTAC	3 cut(s)	752, 800, 932
AfeI	AGCGCT	1 cut(s)	418
AfiI	CCNNNNNNNGG	4 cut(s)	120, 602, 836, 882
AgsI	TTSAA	6 cut(s)	657, 769, 1023, 1537, 1854, 1888
AjnI	CCWGG	2 cut(s)	195, 384
Alw21I	GWGCWC	1 cut(s)	1678
Alw26I	GTCTC	1 cut(s)	352
AlwI	GGATC	2 cut(s)	587, 1262
AlwNI	CAGNNNCTG	1 cut(s)	74
Aor51HI	AGCGCT	1 cut(s)	418
AoxI	GGCC	9 cut(s)	193, 198, 408, 517, 907, 1193, 1344, 1697, 1763
ApaI	GGGCCC	1 cut(s)	521
ApeKI	GCWGC	7 cut(s)	6, 68, 71, 74, 162, 465, 560
ApoI	RAATTY	4 cut(s)	975, 1519, 1531, 1537
AspLEI	GCGC	2 cut(s)	419, 1426
AspS9I	GGNCC	6 cut(s)	199, 408, 517, 518, 584, 1628
AsuHPI	GGTGA	4 cut(s)	370, 448, 676, 1745
AsuII	TTCGAA	1 cut(s)	1001
AvaII	GGWCC	2 cut(s)	584, 1628
BaeGI	GKGCMC	2 cut(s)	521, 941
BalI	TGGCCA	1 cut(s)	1346
BanI	GGYRCC	1 cut(s)	1411
BanII	GRGCYC	2 cut(s)	456, 521
BbsI	GAAGAC	2 cut(s)	28, 680
Bbv12I	GWGCWC	1 cut(s)	1678
BbvCI	CCTCAGC	2 cut(s)	176, 637
BbvI	GCAGC	7 cut(s)	18, 58, 61, 80, 149, 477, 547
BccI	CCATC	3 cut(s)	419, 875, 944
BceAI	ACGGC	1 cut(s)	166
BciT130I	CCWGG	2 cut(s)	197, 386
BclI	TGATCA	1 cut(s)	1551
BcoDI	GTCTC	1 cut(s)	352
BfaI	CTAG	5 cut(s)	311, 786, 819, 1092, 1524
BfmI	CTRYAG	2 cut(s)	420, 561
BfoI	RGCGCY	1 cut(s)	420
BglI	GCCNNNNNGGC	1 cut(s)	186
BglII	AGATCT	3 cut(s)	94, 442, 1793
BisI	GCNGC	8 cut(s)	7, 69, 72, 75, 163, 255, 466, 561
BlsI	GCNGC	8 cut(s)	8, 70, 73, 76, 164, 256, 467, 562
Bme1390I	CCNGG	2 cut(s)	197, 386
Bme18I	GGWCC	2 cut(s)	584, 1628
BmgT120I	GGNCC	6 cut(s)	199, 408, 517, 518, 584, 1628
BmiI	GGNNCC	4 cut(s)	409, 519, 585, 1413
BmrFI	CCNGG	2 cut(s)	197, 386
BmrI	ACTGGG	1 cut(s)	612
BmsI	GCATC	2 cut(s)	469, 1560
BmuI	ACTGGG	1 cut(s)	612
BpiI	GAAGAC	2 cut(s)	28, 680
BplI	GAGNNNNNCTC	2 cut(s)	1180, 1212
BpmI	CTGGAG	2 cut(s)	284, 467
Bpu10I	CCTNAGC	2 cut(s)	176, 637
Bpu14I	TTCGAA	1 cut(s)	1001
BpuEI	CTTGAG	4 cut(s)	194, 887, 1186, 1502
BsaAI	YACGTR	1 cut(s)	802
BsaJI	CCNNGG	2 cut(s)	119, 910
BsaXI	ACNNNNNCTCC	4 cut(s)	1174, 1204, 1849, 1879
Bsc4I	CCNNNNNNNGG	4 cut(s)	120, 602, 836, 882
Bse1I	ACTGG	3 cut(s)	274, 395, 607
BseBI	CCWGG	2 cut(s)	197, 386
BseDI	CCNNGG	2 cut(s)	119, 910
BseGI	GGATG	3 cut(s)	1015, 1575, 1728
BseLI	CCNNNNNNNGG	4 cut(s)	120, 602, 836, 882
BseMII	CTCAG	8 cut(s)	89, 190, 353, 651, 905, 1145, 1211, 1709
BseNI	ACTGG	3 cut(s)	274, 395, 607
BseRI	GAGGAG	3 cut(s)	164, 1028, 1610
BseSI	GKGCMC	2 cut(s)	521, 941
BseXI	GCAGC	7 cut(s)	18, 58, 61, 80, 149, 477, 547
BseYI	CCCAGC	1 cut(s)	1841
BsgI	GTGCAG	2 cut(s)	25, 484
BshFI	GGCC	9 cut(s)	195, 200, 410, 519, 909, 1195, 1346, 1699, 1765
BshNI	GGYRCC	1 cut(s)	1411
BsiHKAI	GWGCWC	1 cut(s)	1678
BsiSI	CCGG	2 cut(s)	369, 1051
BslFI	GGGAC	7 cut(s)	137, 280, 299, 967, 1292, 1303, 1857
BslI	CCNNNNNNNGG	4 cut(s)	120, 602, 836, 882
BsmAI	GTCTC	1 cut(s)	352
BsmFI	GGGAC	7 cut(s)	137, 280, 299, 967, 1292, 1303, 1857
BsmI	GAATGC	1 cut(s)	612
BsnI	GGCC	9 cut(s)	195, 200, 410, 519, 909, 1195, 1346, 1699, 1765
Bsp119I	TTCGAA	1 cut(s)	1001
Bsp120I	GGGCCC	1 cut(s)	517
Bsp1286I	GDGCHC	4 cut(s)	456, 521, 941, 1678
Bsp1407I	TGTACA	2 cut(s)	750, 930
Bsp143I	GATC	9 cut(s)	94, 442, 592, 1132, 1254, 1485, 1551, 1793, 1832
Bsp19I	CCATGG	1 cut(s)	119
BspACI	CCGC	5 cut(s)	246, 252, 255, 357, 510
BspANI	GGCC	9 cut(s)	195, 200, 410, 519, 909, 1195, 1346, 1699, 1765
BspCNI	CTCAG	8 cut(s)	90, 189, 352, 650, 904, 1146, 1210, 1710
BspHI	TCATGA	1 cut(s)	1488
BspLI	GGNNCC	4 cut(s)	409, 519, 585, 1413
BspMAI	CTGCAG	1 cut(s)	565
BspPI	GGATC	2 cut(s)	587, 1262
BspQI	GCTCTTC	1 cut(s)	1442
BspT104I	TTCGAA	1 cut(s)	1001
BspT107I	GGYRCC	1 cut(s)	1411
BsrBI	CCGCTC	1 cut(s)	510
BsrGI	TGTACA	2 cut(s)	750, 930
BsrI	ACTGG	3 cut(s)	274, 395, 607
BssECI	CCNNGG	2 cut(s)	119, 910
BssMI	GATC	9 cut(s)	94, 442, 592, 1132, 1254, 1485, 1551, 1793, 1832
BssT1I	CCWWGG	2 cut(s)	119, 910
Bst2UI	CCWGG	2 cut(s)	197, 386
Bst4CI	ACNGT	5 cut(s)	64, 382, 550, 1403, 1861
Bst6I	CTCTTC	4 cut(s)	188, 644, 789, 1442
BstAPI	GCANNNNNTGC	3 cut(s)	74, 159, 471
BstAUI	TGTACA	2 cut(s)	750, 930
BstBAI	YACGTR	1 cut(s)	802
BstBI	TTCGAA	1 cut(s)	1001
BstC8I	GCNNGC	7 cut(s)	259, 361, 610, 623, 729, 1263, 1393
BstDEI	CTNAG	9 cut(s)	98, 176, 339, 637, 891, 1073, 1154, 1197, 1718
BstDSI	CCRYGG	1 cut(s)	119
BstF5I	GGATG	3 cut(s)	1015, 1575, 1728
BstH2I	RGCGCY	1 cut(s)	420
BstHHI	GCGC	2 cut(s)	419, 1426
BstKTI	GATC	9 cut(s)	97, 445, 595, 1135, 1257, 1488, 1554, 1796, 1835
BstMAI	GTCTC	1 cut(s)	352
BstMBI	GATC	9 cut(s)	94, 442, 592, 1132, 1254, 1485, 1551, 1793, 1832
BstNI	CCWGG	2 cut(s)	197, 386
BstSCI	CCNGG	2 cut(s)	195, 384
BstSFI	CTRYAG	2 cut(s)	420, 561
BstSLI	GKGCMC	2 cut(s)	521, 941
BstV1I	GCAGC	7 cut(s)	18, 58, 61, 80, 149, 477, 547
BstV2I	GAAGAC	2 cut(s)	28, 680
BstX2I	RGATCY	3 cut(s)	94, 442, 1793
BstYI	RGATCY	3 cut(s)	94, 442, 1793
BsuRI	GGCC	9 cut(s)	195, 200, 410, 519, 909, 1195, 1346, 1699, 1765
BtgI	CCRYGG	1 cut(s)	119
BtgZI	GCGATG	2 cut(s)	1110, 1467
BtsCI	GGATG	3 cut(s)	1015, 1575, 1728
BtsI	GCAGTG	2 cut(s)	157, 972
BtsIMutI	CAGTG	6 cut(s)	60, 157, 876, 972, 1715, 1857
Cac8I	GCNNGC	7 cut(s)	259, 361, 610, 623, 729, 1263, 1393
CaiI	CAGNNNCTG	1 cut(s)	74
CciI	TCATGA	1 cut(s)	1488
CfoI	GCGC	2 cut(s)	419, 1426
Cfr13I	GGNCC	6 cut(s)	199, 408, 517, 518, 584, 1628
Csp6I	GTAC	3 cut(s)	751, 799, 931
CspCI	CAANNNNNGTGG	2 cut(s)	325, 360
CviAII	CATG	9 cut(s)	84, 120, 223, 748, 791, 901, 1138, 1489, 1679
CviQI	GTAC	3 cut(s)	751, 799, 931
DdeI	CTNAG	9 cut(s)	98, 176, 339, 637, 891, 1073, 1154, 1197, 1718
DpnI	GATC	9 cut(s)	96, 444, 594, 1134, 1256, 1487, 1553, 1795, 1834
DpnII	GATC	9 cut(s)	94, 442, 592, 1132, 1254, 1485, 1551, 1793, 1832
DraI	TTTAAA	1 cut(s)	1105
DraIII	CACNNNGTG	2 cut(s)	432, 462
EaeI	YGGCCR	1 cut(s)	1344
Eam1104I	CTCTTC	4 cut(s)	188, 644, 789, 1442
EarI	CTCTTC	4 cut(s)	188, 644, 789, 1442
EciI	GGCGGA	1 cut(s)	241
Eco130I	CCWWGG	2 cut(s)	119, 910
Eco147I	AGGCCT	2 cut(s)	195, 1699
Eco24I	GRGCYC	2 cut(s)	456, 521
Eco47I	GGWCC	2 cut(s)	584, 1628
Eco47III	AGCGCT	1 cut(s)	418
EcoO109I	RGGNCCY	1 cut(s)	584
EcoRI	GAATTC	2 cut(s)	1519, 1537
EcoRII	CCWGG	2 cut(s)	195, 384
EcoT14I	CCWWGG	2 cut(s)	119, 910
EcoT22I	ATGCAT	1 cut(s)	1575
EcoT38I	GRGCYC	2 cut(s)	456, 521
ErhI	CCWWGG	2 cut(s)	119, 910
FaeI	CATG	9 cut(s)	87, 123, 226, 751, 794, 904, 1141, 1492, 1682
FaqI	GGGAC	7 cut(s)	137, 280, 299, 967, 1292, 1303, 1857
FatI	CATG	9 cut(s)	83, 119, 222, 747, 790, 900, 1137, 1488, 1678
FauI	CCCGC	2 cut(s)	364, 503
FbaI	TGATCA	1 cut(s)	1551
Fnu4HI	GCNGC	8 cut(s)	7, 69, 72, 75, 163, 255, 466, 561
FokI	GGATG	3 cut(s)	1022, 1582, 1735
FriOI	GRGCYC	2 cut(s)	456, 521
Fsp4HI	GCNGC	8 cut(s)	7, 69, 72, 75, 163, 255, 466, 561
FspBI	CTAG	5 cut(s)	311, 786, 819, 1092, 1524
GlaI	GCGC	2 cut(s)	418, 1425
GluI	GCNGC	8 cut(s)	7, 69, 72, 75, 163, 255, 466, 561
GsaI	CCCAGC	1 cut(s)	1845
GsuI	CTGGAG	2 cut(s)	284, 467
HaeII	RGCGCY	1 cut(s)	420
HaeIII	GGCC	9 cut(s)	195, 200, 410, 519, 909, 1195, 1346, 1699, 1765
HapII	CCGG	2 cut(s)	369, 1051
HhaI	GCGC	2 cut(s)	419, 1426
Hin1II	CATG	9 cut(s)	87, 123, 226, 751, 794, 904, 1141, 1492, 1682
Hin6I	GCGC	2 cut(s)	417, 1424
HinP1I	GCGC	2 cut(s)	417, 1424
HpaII	CCGG	2 cut(s)	369, 1051
HphI	GGTGA	4 cut(s)	370, 448, 676, 1745
Hpy166II	GTNNAC	4 cut(s)	633, 931, 1240, 1459
Hpy188III	TCNNGA	9 cut(s)	328, 446, 587, 980, 1481, 1489, 1748, 1820, 1836
Hpy8I	GTNNAC	4 cut(s)	633, 931, 1240, 1459
HpyAV	CCTTC	4 cut(s)	25, 124, 1312, 1619
HpyCH4III	ACNGT	5 cut(s)	64, 382, 550, 1403, 1861
HpyCH4IV	ACGT	2 cut(s)	105, 801
HpyF3I	CTNAG	9 cut(s)	98, 176, 339, 637, 891, 1073, 1154, 1197, 1718
HpySE526I	ACGT	2 cut(s)	105, 801
Hsp92II	CATG	9 cut(s)	87, 123, 226, 751, 794, 904, 1141, 1492, 1682
HspAI	GCGC	2 cut(s)	417, 1424
Ksp22I	TGATCA	1 cut(s)	1551
Kzo9I	GATC	9 cut(s)	94, 442, 592, 1132, 1254, 1485, 1551, 1793, 1832
LguI	GCTCTTC	1 cut(s)	1442
LmnI	GCTCC	3 cut(s)	32, 237, 862
Lsp1109I	GCAGC	7 cut(s)	18, 58, 61, 80, 149, 477, 547
LweI	GCATC	2 cut(s)	469, 1560
MaeI	CTAG	5 cut(s)	311, 786, 819, 1092, 1524
MaeII	ACGT	2 cut(s)	105, 801
MaeIII	GTNAC	4 cut(s)	493, 1087, 1157, 1861
MalI	GATC	9 cut(s)	96, 444, 594, 1134, 1256, 1487, 1553, 1795, 1834
MbiI	CCGCTC	1 cut(s)	510
MboI	GATC	9 cut(s)	94, 442, 592, 1132, 1254, 1485, 1551, 1793, 1832
MboII	GAAGA	9 cut(s)	28, 37, 175, 661, 685, 806, 907, 1459, 1788
MflI	RGATCY	3 cut(s)	94, 442, 1793
MhlI	GDGCHC	4 cut(s)	456, 521, 941, 1678
MlsI	TGGCCA	1 cut(s)	1346
MluCI	AATT	5 cut(s)	832, 975, 1519, 1531, 1537
MluNI	TGGCCA	1 cut(s)	1346
MlyI	GAGTC	6 cut(s)	670, 949, 998, 1301, 1793, 1879
MmeI	TCCRAC	2 cut(s)	375, 1707
Mox20I	TGGCCA	1 cut(s)	1346
Mph1103I	ATGCAT	1 cut(s)	1575
MscI	TGGCCA	1 cut(s)	1346
MseI	TTAA	2 cut(s)	1104, 1616
Msp20I	TGGCCA	1 cut(s)	1346
MspA1I	CMGCKG	3 cut(s)	71, 363, 641
MspI	CCGG	2 cut(s)	369, 1051
MspR9I	CCNGG	2 cut(s)	197, 386
Mva1269I	GAATGC	1 cut(s)	612
MvaI	CCWGG	2 cut(s)	197, 386
NcoI	CCATGG	1 cut(s)	119
NdeII	GATC	9 cut(s)	94, 442, 592, 1132, 1254, 1485, 1551, 1793, 1832
NlaIII	CATG	9 cut(s)	87, 123, 226, 751, 794, 904, 1141, 1492, 1682
NlaIV	GGNNCC	4 cut(s)	409, 519, 585, 1413
NmuCI	GTSAC	2 cut(s)	493, 1157
NsiI	ATGCAT	1 cut(s)	1575
NspV	TTCGAA	1 cut(s)	1001
PagI	TCATGA	1 cut(s)	1488
PceI	AGGCCT	2 cut(s)	195, 1699
PciSI	GCTCTTC	1 cut(s)	1442
PcsI	WCGNNNNNNNCGW	1 cut(s)	1562
PctI	GAATGC	1 cut(s)	612
PfeI	GAWTC	7 cut(s)	372, 574, 998, 1060, 1150, 1477, 1666
PflMI	CCANNNNNTGG	1 cut(s)	602
PfoI	TCCNGGA	1 cut(s)	384
PkrI	GCNGC	8 cut(s)	8, 70, 73, 76, 164, 256, 467, 562
PleI	GAGTC	6 cut(s)	670, 949, 997, 1301, 1792, 1878
PpsI	GAGTC	6 cut(s)	670, 949, 997, 1301, 1792, 1878
Ppu21I	YACGTR	1 cut(s)	802
PpuMI	RGGWCCY	1 cut(s)	584
PsiI	TTATAA	1 cut(s)	1040
Psp5II	RGGWCCY	1 cut(s)	584
Psp6I	CCWGG	2 cut(s)	195, 384
PspFI	CCCAGC	1 cut(s)	1841
PspGI	CCWGG	2 cut(s)	195, 384
PspN4I	GGNNCC	4 cut(s)	409, 519, 585, 1413
PspOMI	GGGCCC	1 cut(s)	517
PspPI	GGNCC	6 cut(s)	199, 408, 517, 518, 584, 1628
PspPPI	RGGWCCY	1 cut(s)	584
PstI	CTGCAG	1 cut(s)	565
PstNI	CAGNNNCTG	1 cut(s)	74
PsuI	RGATCY	3 cut(s)	94, 442, 1793
PvuII	CAGCTG	3 cut(s)	71, 363, 641
RsaI	GTAC	3 cut(s)	752, 800, 932
RsaNI	GTAC	3 cut(s)	751, 799, 931
SapI	GCTCTTC	1 cut(s)	1442
SaqAI	TTAA	2 cut(s)	1104, 1616
SatI	GCNGC	8 cut(s)	7, 69, 72, 75, 163, 255, 466, 561
Sau3AI	GATC	9 cut(s)	94, 442, 592, 1132, 1254, 1485, 1551, 1793, 1832
Sau96I	GGNCC	6 cut(s)	199, 408, 517, 518, 584, 1628
SchI	GAGTC	6 cut(s)	670, 949, 998, 1301, 1793, 1879
ScrFI	CCNGG	2 cut(s)	197, 386
SduI	GDGCHC	4 cut(s)	456, 521, 941, 1678
SfaNI	GCATC	2 cut(s)	469, 1560
SfcI	CTRYAG	2 cut(s)	420, 561
SfuI	TTCGAA	1 cut(s)	1001
SinI	GGWCC	2 cut(s)	584, 1628
SmlI	CTYRAG	4 cut(s)	209, 866, 1165, 1481
SmoI	CTYRAG	4 cut(s)	209, 866, 1165, 1481
Sse9I	AATT	5 cut(s)	832, 975, 1519, 1531, 1537
SseBI	AGGCCT	2 cut(s)	195, 1699
SsiI	CCGC	5 cut(s)	246, 252, 255, 357, 510
SspMI	CTAG	5 cut(s)	311, 786, 819, 1092, 1524
StuI	AGGCCT	2 cut(s)	195, 1699
StyD4I	CCNGG	2 cut(s)	195, 384
StyI	CCWWGG	2 cut(s)	119, 910
TaaI	ACNGT	5 cut(s)	64, 382, 550, 1403, 1861
TaiI	ACGT	2 cut(s)	108, 804
TaqI	TCGA	2 cut(s)	1001, 1517
TasI	AATT	5 cut(s)	832, 975, 1519, 1531, 1537
TatI	WGTACW	2 cut(s)	750, 930
TauI	GCSGC	1 cut(s)	257
TfiI	GAWTC	7 cut(s)	372, 574, 998, 1060, 1150, 1477, 1666
Tru1I	TTAA	2 cut(s)	1104, 1616
Tru9I	TTAA	2 cut(s)	1104, 1616
TscAI	CASTG	6 cut(s)	67, 164, 883, 972, 1722, 1864
TseFI	GTSAC	2 cut(s)	493, 1157
TseI	GCWGC	7 cut(s)	6, 68, 71, 74, 162, 465, 560
Tsp45I	GTSAC	2 cut(s)	493, 1157
TspDTI	ATGAA	5 cut(s)	37, 69, 807, 1331, 1623
TspGWI	ACGGA	3 cut(s)	410, 1457, 1571
TspRI	CASTG	6 cut(s)	67, 164, 883, 972, 1722, 1864
Van91I	CCANNNNNTGG	1 cut(s)	602
VpaK11BI	GGWCC	2 cut(s)	584, 1628
XapI	RAATTY	4 cut(s)	975, 1519, 1531, 1537
XcmI	CCANNNNNNNNNTGG	1 cut(s)	917
XspI	CTAG	5 cut(s)	311, 786, 819, 1092, 1524
Zsp2I	ATGCAT	1 cut(s)	1575

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.