Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0013663

Physical Location & Seq

Genomic Coordinates Reverse (-)

11473747 .. 11481343

Gene Structure 7597 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG154500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1467 bp

ATGGGCCAAGATATAATCAAGCAGTTAAAGGGAATGAATGGGCAGGCAGTACCAGTTGGATATGGGAGTCCTAACAGTGATGCTGGGCACGTAGTCCTTGGATCATCAAAAAGGTGCAGTTTTCAAGCACAGGAAAAGCTATCCAGACCATTTGTCAGTTTGGGCCAAGATGTAACAAATAGGTTAAAGTTCAAGTTAAAGCGAATGGAAATGCGATCACTGGGATATGAGAGTCCCAAGGATGATGCTAGACAGGTAGTTCTTGAAGCATCAAAGAGGGGCAGTTTTCTTCAAGCACCGGAAAAGCATGCTAAAACATTGGACGGTACGGGCCAAGATGGACGTGCAGTACCAGTTGGATTGGACAGTCCCAAGGGTGATGCTACGCACCCAGTCCTTGAAGCATCAAAGAGTTGCAGTTTTCTCCAAGCTCCGGAAAAGCATGCCGAAATGTTTGATAATACGGGCCACAATGGGTCTCCAGTACCAGTTGGATTGGATAGTCGCAAGGGTGATGCTAGGCACCTAGTCCTTGAACCACCAAAGAGTTTTCGTCAAGCACAGAAAAAGCGATCTAAAACATTGGCCAATAGGGGCCAAGATGTAACTAACAAATCAAAAGCTTTGGATTGGAATGCAGTATCATTTGGATGTGACAGTCCCAAGGATGATGCTAGGCACGTAGTCCTTGAGGCATCAAAGAGCTTTCTTCAAGCACATGAAAAGCATTCTAAAAAATTGGACAATATGGGCCAAGATCTAACAAAGAAGTTAAAGGTCAAGTTAAAGTTAAAAAAGGGATTGCATGGGCGTCCAGTACCAGTTAGAGATGATGGTCTCAAGGGTGATGCTGGGAATCTAGTCCTAGAGGCATCAAAGAGTTTGGAACAAAGTATTGGTGGTTTGATTGATGGAGGTGGAAATACTGAAGTAGACCAGCACACTCAGATGGAGACTAAGTCAATCAAGCCAAGACTTGTACGGATATCTGTCACGGATGGTGATGCAACAGAGTCCTCCAGCGATGAAGAGGCTGAGCCCTTGGCCACTAGTCACCGAGTCAAGAAGTTCATCAATGAGATTATGATCGAGTCCTCCTCCACAAAAACTGATAGTGGTGTTTGGAGGAGCAGGACAACAAGGATGTGGCGGAAGAAGACAGGTGGAAAATCTGGACTTCCAGCTACTTGCCGAACGTTGAAGGCACAGACAACCTGGAAGAAGTTCCGCGGTGTGAAGGCACAGGCAACCAAGAACAAGTTCCTAGGAGTGAGGCAGAGACCATGGGGAAAATGGGCAGCAGAGATTAGAGAGCCTCATAGTGGAAGACGGCTCTGGTTGGGTACATTTGATACGGCTGAGGATGCAGCTATGGTGTACGACAAAGCAGCCGTTCTGCTGCGTGGACCTGACACTTTCACCAACTTCAGTACACCTCAGGTGGCAAATGAAGATGGCAATTTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0009790 GO:0009791 GO:0009793 GO:0009889 GO:0010154 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0022622 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0042802 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0048316 GO:0048364 GO:0048366 GO:0048367 GO:0048608 GO:0048731 GO:0048825 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AP2

Protein Analysis

488

Amino Acids

53.48

Weight (kDa)

9.75

Isoelectric Point (pI)

41.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AP2	PF00847	421 - 469	1.6e-11	AP2 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013663)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g03840 FvH4_5g03840 FvH4_5g03840 FvH4_5g03840 FvH4_5g03840 FvH4_5g03840 FvH4_5g03840
rosa_chinensis	RchiOBHm_Chr7g0195661
rosa_laevigata	RLG00000004099
rosa_multiflora	Rmu_sc0003314.1_g000014 Rmu_sc0042286.1_g000001
rosa_roxburghii	Rroxscaffold_3G00260240
rosa_rugosa	Rorug07G0025600
rosa_samantha	Rh7AG153100 Rh7BG154500 Rh7CG158400 Rh7DG154100
rosa_wichuraiana	Rw7G013090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	522
AccI	GTMKAC	1 cut(s)	933
AccII	CGCG	1 cut(s)	1230
AccIII	TCCGGA	1 cut(s)	433
AciI	CCGC	3 cut(s)	1150, 1228, 1230
AclI	AACGTT	1 cut(s)	1196
AclWI	GGATC	1 cut(s)	109
AcoI	YGGCCR	2 cut(s)	585, 1044
AcuI	CTGAAG	2 cut(s)	948, 1411
AcyI	GRCGYC	1 cut(s)	811
AfaI	GTAC	9 cut(s)	51, 328, 351, 486, 819, 981, 1345, 1379, 1432
AfiI	CCNNNNNNNGG	2 cut(s)	433, 1322
AgsI	TTSAA	8 cut(s)	125, 193, 266, 293, 401, 536, 713, 1201
AhdI	GACNNNNNGTC	1 cut(s)	152
AhlI	ACTAGT	1 cut(s)	1049
AjiI	CACGTC	1 cut(s)	344
AjnI	CCWGG	1 cut(s)	1214
AjuI	GAANNNNNNNTTGG	4 cut(s)	879, 911, 1244, 1276
AluBI	AGCT	6 cut(s)	139, 431, 623, 705, 1184, 1370
AluI	AGCT	6 cut(s)	139, 431, 623, 705, 1184, 1370
Alw26I	GTCTC	4 cut(s)	483, 842, 947, 1273
AlwI	GGATC	1 cut(s)	109
Aor13HI	TCCGGA	1 cut(s)	433
AoxI	GGCC	8 cut(s)	4, 163, 331, 466, 585, 595, 751, 1044
ApeKI	GCWGC	4 cut(s)	1298, 1367, 1388, 1399
Asp700I	GAANNNNTTC	2 cut(s)	1223, 1259
AspA2I	CCTAGG	1 cut(s)	1264
AspS9I	GGNCC	7 cut(s)	4, 163, 331, 466, 595, 751, 1406
AsuHPI	GGTGA	6 cut(s)	389, 524, 857, 1013, 1046, 1411
AvaII	GGWCC	1 cut(s)	1406
AvrII	CCTAGG	1 cut(s)	1264
AxyI	CCTNAGG	1 cut(s)	1437
BaeGI	GKGCMC	1 cut(s)	90
BalI	TGGCCA	2 cut(s)	587, 1046
BanI	GGYRCC	1 cut(s)	522
BanII	GRGCYC	1 cut(s)	1041
BbsI	GAAGAC	2 cut(s)	1163, 1333
BbvCI	CCTCAGC	1 cut(s)	1359
BbvI	GCAGC	4 cut(s)	1310, 1379, 1386, 1400
BccI	CCATC	6 cut(s)	332, 827, 905, 943, 992, 1448
BceAI	ACGGC	3 cut(s)	1346, 1371, 1376
BciT130I	CCWGG	1 cut(s)	1216
BcoDI	GTCTC	4 cut(s)	483, 842, 947, 1273
BcuI	ACTAGT	1 cut(s)	1049
BfaI	CTAG	8 cut(s)	249, 519, 527, 675, 860, 866, 1050, 1265
BglII	AGATCT	1 cut(s)	757
BisI	GCNGC	4 cut(s)	1299, 1368, 1389, 1400
BlnI	CCTAGG	1 cut(s)	1264
BlpI	GCTNAGC	1 cut(s)	1035
BlsI	GCNGC	4 cut(s)	1300, 1369, 1390, 1401
Bme1390I	CCNGG	1 cut(s)	1216
Bme18I	GGWCC	1 cut(s)	1406
BmeRI	GACNNNNNGTC	1 cut(s)	152
BmgBI	CACGTC	1 cut(s)	344
BmgT120I	GGNCC	7 cut(s)	4, 163, 331, 466, 595, 751, 1406
BmiI	GGNNCC	2 cut(s)	524, 596
BmrFI	CCNGG	1 cut(s)	1216
BmrI	ACTGGG	2 cut(s)	230, 386
BmuI	ACTGGG	2 cut(s)	230, 386
BpiI	GAAGAC	2 cut(s)	1163, 1333
BplI	GAGNNNNNCTC	2 cut(s)	1082, 1114
BpmI	CTGGAG	2 cut(s)	465, 1003
Bpu10I	CCTNAGC	1 cut(s)	1359
Bpu1102I	GCTNAGC	1 cut(s)	1035
BpuEI	CTTGAG	2 cut(s)	710, 824
BsaAI	YACGTR	2 cut(s)	91, 682
BsaBI	GATNNNNATC	1 cut(s)	1085
BsaHI	GRCGYC	1 cut(s)	811
BsaI	GGTCTC	3 cut(s)	483, 842, 1273
BsaJI	CCNNGG	8 cut(s)	97, 237, 372, 663, 1041, 1228, 1264, 1283
BsaWI	WCCGGW	2 cut(s)	298, 433
BsaXI	ACNNNNNCTCC	2 cut(s)	944, 974
Bsc4I	CCNNNNNNNGG	2 cut(s)	433, 1322
Bse1I	ACTGG	8 cut(s)	53, 225, 353, 392, 482, 488, 815, 821
Bse21I	CCTNAGG	1 cut(s)	1437
Bse8I	GATNNNNATC	1 cut(s)	1085
BseAI	TCCGGA	1 cut(s)	433
BseBI	CCWGG	1 cut(s)	1216
BseDI	CCNNGG	8 cut(s)	97, 237, 372, 663, 1041, 1228, 1264, 1283
BseGI	GGATG	6 cut(s)	247, 656, 673, 1003, 1149, 1369
BseJI	GATNNNNATC	1 cut(s)	1085
BseLI	CCNNNNNNNGG	2 cut(s)	433, 1322
BseMII	CTCAG	4 cut(s)	959, 1026, 1350, 1451
BseNI	ACTGG	8 cut(s)	53, 225, 353, 392, 482, 488, 815, 821
BseRI	GAGGAG	2 cut(s)	1087, 1141
BseSI	GKGCMC	1 cut(s)	90
BseXI	GCAGC	4 cut(s)	1310, 1379, 1386, 1400
BseYI	CCCAGC	2 cut(s)	83, 851
BsgI	GTGCAG	2 cut(s)	136, 366
Bsh1236I	CGCG	1 cut(s)	1230
BshFI	GGCC	8 cut(s)	6, 165, 333, 468, 587, 597, 753, 1046
BshNI	GGYRCC	1 cut(s)	522
BsiSI	CCGG	2 cut(s)	299, 434
BslFI	GGGAC	3 cut(s)	219, 354, 645
BslI	CCNNNNNNNGG	2 cut(s)	433, 1322
BsmAI	GTCTC	4 cut(s)	483, 842, 947, 1273
BsmFI	GGGAC	3 cut(s)	219, 354, 645
BsmI	GAATGC	2 cut(s)	640, 727
BsnI	GGCC	8 cut(s)	6, 165, 333, 468, 587, 597, 753, 1046
Bso31I	GGTCTC	3 cut(s)	483, 842, 1273
Bsp1286I	GDGCHC	2 cut(s)	90, 1041
Bsp13I	TCCGGA	1 cut(s)	433
Bsp143I	GATC	5 cut(s)	101, 215, 572, 757, 1086
Bsp1720I	GCTNAGC	1 cut(s)	1035
Bsp19I	CCATGG	1 cut(s)	1283
BspACI	CCGC	3 cut(s)	1150, 1228, 1230
BspANI	GGCC	8 cut(s)	6, 165, 333, 468, 587, 597, 753, 1046
BspCNI	CTCAG	4 cut(s)	958, 1027, 1351, 1450
BspEI	TCCGGA	1 cut(s)	433
BspFNI	CGCG	1 cut(s)	1230
BspLI	GGNNCC	2 cut(s)	524, 596
BspPI	GGATC	1 cut(s)	109
BspT107I	GGYRCC	1 cut(s)	522
BspTNI	GGTCTC	3 cut(s)	483, 842, 1273
BsrI	ACTGG	8 cut(s)	53, 225, 353, 392, 482, 488, 815, 821
BssECI	CCNNGG	8 cut(s)	97, 237, 372, 663, 1041, 1228, 1264, 1283
BssMI	GATC	5 cut(s)	101, 215, 572, 757, 1086
BssNI	GRCGYC	1 cut(s)	811
BssT1I	CCWWGG	7 cut(s)	97, 237, 372, 663, 1041, 1264, 1283
Bst2UI	CCWGG	1 cut(s)	1216
Bst4CI	ACNGT	4 cut(s)	77, 326, 368, 659
Bst6I	CTCTTC	1 cut(s)	1023
BstACI	GRCGYC	1 cut(s)	811
BstBAI	YACGTR	2 cut(s)	91, 682
BstC8I	GCNNGC	3 cut(s)	45, 309, 444
BstDEI	CTNAG	5 cut(s)	945, 957, 1035, 1359, 1437
BstDSI	CCRYGG	2 cut(s)	1228, 1283
BstF5I	GGATG	6 cut(s)	247, 656, 673, 1003, 1149, 1369
BstFNI	CGCG	1 cut(s)	1230
BstKTI	GATC	5 cut(s)	104, 218, 575, 760, 1089
BstMAI	GTCTC	4 cut(s)	483, 842, 947, 1273
BstMBI	GATC	5 cut(s)	101, 215, 572, 757, 1086
BstMWI	GCNNNNNNNGC	1 cut(s)	1364
BstNI	CCWGG	1 cut(s)	1216
BstNSI	RCATGY	2 cut(s)	311, 446
BstSCI	CCNGG	1 cut(s)	1214
BstSLI	GKGCMC	1 cut(s)	90
BstUI	CGCG	1 cut(s)	1230
BstV1I	GCAGC	4 cut(s)	1310, 1379, 1386, 1400
BstV2I	GAAGAC	2 cut(s)	1163, 1333
BstX2I	RGATCY	1 cut(s)	757
BstYI	RGATCY	1 cut(s)	757
Bsu36I	CCTNAGG	1 cut(s)	1437
BsuRI	GGCC	8 cut(s)	6, 165, 333, 468, 587, 597, 753, 1046
BtgI	CCRYGG	2 cut(s)	1228, 1283
BtgZI	GCGATG	1 cut(s)	1038
BtrI	CACGTC	1 cut(s)	344
BtsCI	GGATG	6 cut(s)	247, 656, 673, 1003, 1149, 1369
BtsIMutI	CAGTG	2 cut(s)	82, 218
Cac8I	GCNNGC	3 cut(s)	45, 309, 444
Cfr13I	GGNCC	7 cut(s)	4, 163, 331, 466, 595, 751, 1406
Cfr42I	CCGCGG	1 cut(s)	1231
CseI	GACGC	1 cut(s)	800
Csp6I	GTAC	9 cut(s)	50, 327, 350, 485, 818, 980, 1344, 1378, 1431
CviAII	CATG	5 cut(s)	308, 443, 719, 806, 1284
CviQI	GTAC	9 cut(s)	50, 327, 350, 485, 818, 980, 1344, 1378, 1431
DdeI	CTNAG	5 cut(s)	945, 957, 1035, 1359, 1437
DpnI	GATC	5 cut(s)	103, 217, 574, 759, 1088
DpnII	GATC	5 cut(s)	101, 215, 572, 757, 1086
DriI	GACNNNNNGTC	1 cut(s)	152
EaeI	YGGCCR	2 cut(s)	585, 1044
Eam1104I	CTCTTC	1 cut(s)	1023
Eam1105I	GACNNNNNGTC	1 cut(s)	152
EarI	CTCTTC	1 cut(s)	1023
EciI	GGCGGA	1 cut(s)	1165
Eco130I	CCWWGG	7 cut(s)	97, 237, 372, 663, 1041, 1264, 1283
Eco24I	GRGCYC	1 cut(s)	1041
Eco31I	GGTCTC	3 cut(s)	483, 842, 1273
Eco32I	GATATC	1 cut(s)	987
Eco47I	GGWCC	1 cut(s)	1406
Eco57I	CTGAAG	2 cut(s)	948, 1411
Eco81I	CCTNAGG	1 cut(s)	1437
EcoRII	CCWGG	1 cut(s)	1214
EcoRV	GATATC	1 cut(s)	987
EcoT14I	CCWWGG	7 cut(s)	97, 237, 372, 663, 1041, 1264, 1283
EcoT38I	GRGCYC	1 cut(s)	1041
ErhI	CCWWGG	7 cut(s)	97, 237, 372, 663, 1041, 1264, 1283
FaeI	CATG	5 cut(s)	311, 446, 722, 809, 1287
FaqI	GGGAC	3 cut(s)	219, 354, 645
FatI	CATG	5 cut(s)	307, 442, 718, 805, 1283
FblI	GTMKAC	1 cut(s)	933
Fnu4HI	GCNGC	4 cut(s)	1299, 1368, 1389, 1400
FokI	GGATG	6 cut(s)	254, 663, 680, 1010, 1156, 1376
FriOI	GRGCYC	1 cut(s)	1041
Fsp4HI	GCNGC	4 cut(s)	1299, 1368, 1389, 1400
FspBI	CTAG	8 cut(s)	249, 519, 527, 675, 860, 866, 1050, 1265
GluI	GCNGC	4 cut(s)	1299, 1368, 1389, 1400
GsaI	CCCAGC	2 cut(s)	87, 855
GsuI	CTGGAG	2 cut(s)	465, 1003
HaeIII	GGCC	8 cut(s)	6, 165, 333, 468, 587, 597, 753, 1046
HapII	CCGG	2 cut(s)	299, 434
HgaI	GACGC	1 cut(s)	800
Hin1I	GRCGYC	1 cut(s)	811
Hin1II	CATG	5 cut(s)	311, 446, 722, 809, 1287
HindIII	AAGCTT	1 cut(s)	621
HinfI	GANTC	6 cut(s)	67, 232, 856, 1013, 1059, 1091
HpaII	CCGG	2 cut(s)	299, 434
HphI	GGTGA	6 cut(s)	389, 524, 857, 1013, 1046, 1411
Hpy166II	GTNNAC	4 cut(s)	934, 1378, 1406, 1433
Hpy188I	TCNGA	1 cut(s)	948
Hpy188III	TCNNGA	5 cut(s)	144, 263, 434, 1063, 1173
Hpy8I	GTNNAC	4 cut(s)	934, 1378, 1406, 1433
HpyAV	CCTTC	2 cut(s)	1195, 1231
HpyCH4III	ACNGT	4 cut(s)	77, 326, 368, 659
HpyCH4IV	ACGT	4 cut(s)	90, 343, 681, 1196
HpyCH4V	TGCA	7 cut(s)	117, 347, 417, 638, 805, 1007, 1367
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1364
HpyF3I	CTNAG	5 cut(s)	945, 957, 1035, 1359, 1437
HpySE526I	ACGT	4 cut(s)	90, 343, 681, 1196
Hsp92I	GRCGYC	1 cut(s)	811
Hsp92II	CATG	5 cut(s)	311, 446, 722, 809, 1287
Kpn2I	TCCGGA	1 cut(s)	433
KspI	CCGCGG	1 cut(s)	1231
Kzo9I	GATC	5 cut(s)	101, 215, 572, 757, 1086
LmnI	GCTCC	2 cut(s)	436, 1128
Lsp1109I	GCAGC	4 cut(s)	1310, 1379, 1386, 1400
MaeI	CTAG	8 cut(s)	249, 519, 527, 675, 860, 866, 1050, 1265
MaeII	ACGT	4 cut(s)	90, 343, 681, 1196
MaeIII	GTNAC	5 cut(s)	172, 604, 653, 991, 1052
MalI	GATC	5 cut(s)	103, 217, 574, 759, 1088
MboI	GATC	5 cut(s)	101, 215, 572, 757, 1086
MboII	GAAGA	8 cut(s)	281, 701, 1040, 1165, 1168, 1231, 1338, 1463
MflI	RGATCY	1 cut(s)	757
MhlI	GDGCHC	2 cut(s)	90, 1041
MlsI	TGGCCA	2 cut(s)	587, 1046
MluCI	AATT	2 cut(s)	737, 1459
MluNI	TGGCCA	2 cut(s)	587, 1046
MlyI	GAGTC	5 cut(s)	76, 241, 1022, 1068, 1100
MmeI	TCCRAC	3 cut(s)	37, 337, 472
Mox20I	TGGCCA	2 cut(s)	587, 1046
MroI	TCCGGA	1 cut(s)	433
MroXI	GAANNNNTTC	2 cut(s)	1223, 1259
MscI	TGGCCA	2 cut(s)	587, 1046
MseI	TTAA	6 cut(s)	26, 185, 197, 773, 785, 791
MslI	CAYNNNNRTG	2 cut(s)	649, 947
Msp20I	TGGCCA	2 cut(s)	587, 1046
MspA1I	CMGCKG	1 cut(s)	1230
MspI	CCGG	2 cut(s)	299, 434
MspR9I	CCNGG	1 cut(s)	1216
Mva1269I	GAATGC	2 cut(s)	640, 727
MvaI	CCWGG	1 cut(s)	1216
MvnI	CGCG	1 cut(s)	1230
MwoI	GCNNNNNNNGC	1 cut(s)	1364
NcoI	CCATGG	1 cut(s)	1283
NdeII	GATC	5 cut(s)	101, 215, 572, 757, 1086
NlaIII	CATG	5 cut(s)	311, 446, 722, 809, 1287
NlaIV	GGNNCC	2 cut(s)	524, 596
NmuCI	GTSAC	3 cut(s)	653, 991, 1052
NspI	RCATGY	2 cut(s)	311, 446
PaeI	GCATGC	2 cut(s)	311, 446
PctI	GAATGC	2 cut(s)	640, 727
PdmI	GAANNNNTTC	2 cut(s)	1223, 1259
PfeI	GAWTC	1 cut(s)	856
PflFI	GACNNNGTC	1 cut(s)	958
PkrI	GCNGC	4 cut(s)	1300, 1369, 1390, 1401
PleI	GAGTC	5 cut(s)	75, 240, 1021, 1067, 1099
PpsI	GAGTC	5 cut(s)	75, 240, 1021, 1067, 1099
Ppu21I	YACGTR	2 cut(s)	91, 682
Psp1406I	AACGTT	1 cut(s)	1196
Psp6I	CCWGG	1 cut(s)	1214
PspFI	CCCAGC	2 cut(s)	83, 851
PspGI	CCWGG	1 cut(s)	1214
PspN4I	GGNNCC	2 cut(s)	524, 596
PspPI	GGNCC	7 cut(s)	4, 163, 331, 466, 595, 751, 1406
PsuI	RGATCY	1 cut(s)	757
PsyI	GACNNNGTC	1 cut(s)	958
RsaI	GTAC	9 cut(s)	51, 328, 351, 486, 819, 981, 1345, 1379, 1432
RsaNI	GTAC	9 cut(s)	50, 327, 350, 485, 818, 980, 1344, 1378, 1431
RseI	CAYNNNNRTG	2 cut(s)	649, 947
SacII	CCGCGG	1 cut(s)	1231
SaqAI	TTAA	6 cut(s)	26, 185, 197, 773, 785, 791
SatI	GCNGC	4 cut(s)	1299, 1368, 1389, 1400
Sau3AI	GATC	5 cut(s)	101, 215, 572, 757, 1086
Sau96I	GGNCC	7 cut(s)	4, 163, 331, 466, 595, 751, 1406
SchI	GAGTC	5 cut(s)	76, 241, 1022, 1068, 1100
ScrFI	CCNGG	1 cut(s)	1216
SduI	GDGCHC	2 cut(s)	90, 1041
Sfr303I	CCGCGG	1 cut(s)	1231
SgrBI	CCGCGG	1 cut(s)	1231
SinI	GGWCC	1 cut(s)	1406
SmiMI	CAYNNNNRTG	2 cut(s)	649, 947
SmlI	CTYRAG	2 cut(s)	689, 839
SmoI	CTYRAG	2 cut(s)	689, 839
SpeI	ACTAGT	1 cut(s)	1049
SphI	GCATGC	2 cut(s)	311, 446
Sse9I	AATT	2 cut(s)	737, 1459
SsiI	CCGC	3 cut(s)	1150, 1228, 1230
SspMI	CTAG	8 cut(s)	249, 519, 527, 675, 860, 866, 1050, 1265
StyD4I	CCNGG	1 cut(s)	1214
StyI	CCWWGG	7 cut(s)	97, 237, 372, 663, 1041, 1264, 1283
TaaI	ACNGT	4 cut(s)	77, 326, 368, 659
TaiI	ACGT	4 cut(s)	93, 346, 684, 1199
TaqI	TCGA	1 cut(s)	1089
TasI	AATT	2 cut(s)	737, 1459
TatI	WGTACW	1 cut(s)	1430
TfiI	GAWTC	1 cut(s)	856
Tru1I	TTAA	6 cut(s)	26, 185, 197, 773, 785, 791
Tru9I	TTAA	6 cut(s)	26, 185, 197, 773, 785, 791
TscAI	CASTG	2 cut(s)	82, 225
TseFI	GTSAC	3 cut(s)	653, 991, 1052
TseI	GCWGC	4 cut(s)	1298, 1367, 1388, 1399
Tsp45I	GTSAC	3 cut(s)	653, 991, 1052
TspDTI	ATGAA	5 cut(s)	50, 735, 1041, 1060, 1464
TspGWI	ACGGA	2 cut(s)	997, 1010
TspRI	CASTG	2 cut(s)	82, 225
Tth111I	GACNNNGTC	1 cut(s)	958
VpaK11BI	GGWCC	1 cut(s)	1406
XceI	RCATGY	2 cut(s)	311, 446
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1290
XmaJI	CCTAGG	1 cut(s)	1264
XmiI	GTMKAC	1 cut(s)	933
XmnI	GAANNNNTTC	2 cut(s)	1223, 1259
XspI	CTAG	8 cut(s)	249, 519, 527, 675, 860, 866, 1050, 1265

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.