Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr7g0218941 |
| rosa_roxburghii | Rroxscaffold_1G00004690 Rroxscaffold_6G00416650 |
| rosa_samantha | Rh7AG323300 Rh7BG314400 Rh7CG340000 Rh7DG320500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 201 |
| AccBSI | CCGCTC | 1 cut(s) | 343 |
| AciI | CCGC | 1 cut(s) | 341 |
| AflII | CTTAAG | 1 cut(s) | 254 |
| AgsI | TTSAA | 1 cut(s) | 151 |
| AluBI | AGCT | 2 cut(s) | 60, 359 |
| AluI | AGCT | 2 cut(s) | 60, 359 |
| Alw21I | GWGCWC | 1 cut(s) | 307 |
| ApeKI | GCWGC | 1 cut(s) | 73 |
| AspS9I | GGNCC | 1 cut(s) | 278 |
| AvaII | GGWCC | 1 cut(s) | 278 |
| Bbv12I | GWGCWC | 1 cut(s) | 307 |
| BbvI | GCAGC | 1 cut(s) | 60 |
| BfrI | CTTAAG | 1 cut(s) | 254 |
| BisI | GCNGC | 2 cut(s) | 74, 341 |
| BlsI | GCNGC | 2 cut(s) | 75, 342 |
| Bme18I | GGWCC | 1 cut(s) | 278 |
| BmgT120I | GGNCC | 1 cut(s) | 278 |
| BmsI | GCATC | 1 cut(s) | 208 |
| Bpu10I | CCTNAGC | 1 cut(s) | 306 |
| Bse1I | ACTGG | 1 cut(s) | 31 |
| BseGI | GGATG | 1 cut(s) | 223 |
| BseMII | CTCAG | 1 cut(s) | 320 |
| BseNI | ACTGG | 1 cut(s) | 31 |
| BseXI | GCAGC | 1 cut(s) | 60 |
| BsiHKAI | GWGCWC | 1 cut(s) | 307 |
| BslFI | GGGAC | 1 cut(s) | 100 |
| BsmFI | GGGAC | 1 cut(s) | 100 |
| Bsp1286I | GDGCHC | 1 cut(s) | 307 |
| Bsp143I | GATC | 1 cut(s) | 3 |
| BspACI | CCGC | 1 cut(s) | 341 |
| BspCNI | CTCAG | 1 cut(s) | 319 |
| BspTI | CTTAAG | 1 cut(s) | 254 |
| BsrBI | CCGCTC | 1 cut(s) | 343 |
| BsrI | ACTGG | 1 cut(s) | 31 |
| BssMI | GATC | 1 cut(s) | 3 |
| Bst4CI | ACNGT | 1 cut(s) | 171 |
| BstAFI | CTTAAG | 1 cut(s) | 254 |
| BstDEI | CTNAG | 1 cut(s) | 306 |
| BstF5I | GGATG | 1 cut(s) | 223 |
| BstKTI | GATC | 1 cut(s) | 6 |
| BstMBI | GATC | 1 cut(s) | 3 |
| BstV1I | GCAGC | 1 cut(s) | 60 |
| BtsCI | GGATG | 1 cut(s) | 223 |
| Cfr13I | GGNCC | 1 cut(s) | 278 |
| CviAII | CATG | 1 cut(s) | 133 |
| CviJI | RGCY | 6 cut(s) | 30, 60, 208, 259, 330, 359 |
| CviKI_1 | RGCY | 6 cut(s) | 30, 60, 208, 259, 330, 359 |
| DdeI | CTNAG | 1 cut(s) | 306 |
| DpnI | GATC | 1 cut(s) | 5 |
| DpnII | GATC | 1 cut(s) | 3 |
| Eco32I | GATATC | 1 cut(s) | 186 |
| Eco47I | GGWCC | 1 cut(s) | 278 |
| EcoRV | GATATC | 1 cut(s) | 186 |
| EcoT22I | ATGCAT | 1 cut(s) | 274 |
| FaeI | CATG | 1 cut(s) | 136 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 218, 250 |
| FaqI | GGGAC | 1 cut(s) | 100 |
| FatI | CATG | 1 cut(s) | 132 |
| Fnu4HI | GCNGC | 2 cut(s) | 74, 341 |
| FokI | GGATG | 1 cut(s) | 230 |
| Fsp4HI | GCNGC | 2 cut(s) | 74, 341 |
| GluI | GCNGC | 2 cut(s) | 74, 341 |
| Hin1II | CATG | 1 cut(s) | 136 |
| HindIII | AAGCTT | 1 cut(s) | 357 |
| HinfI | GANTC | 3 cut(s) | 82, 113, 125 |
| Hpy188I | TCNGA | 2 cut(s) | 321, 352 |
| Hpy188III | TCNNGA | 1 cut(s) | 215 |
| HpyCH4III | ACNGT | 1 cut(s) | 171 |
| HpyCH4V | TGCA | 5 cut(s) | 18, 54, 221, 272, 293 |
| HpyF3I | CTNAG | 1 cut(s) | 306 |
| Hsp92II | CATG | 1 cut(s) | 136 |
| Kzo9I | GATC | 1 cut(s) | 3 |
| LpnPI | CCDG | 7 cut(s) | 12, 109, 131, 174, 190, 200, 293 |
| Lsp1109I | GCAGC | 1 cut(s) | 60 |
| LweI | GCATC | 1 cut(s) | 208 |
| MalI | GATC | 1 cut(s) | 5 |
| MbiI | CCGCTC | 1 cut(s) | 343 |
| MboI | GATC | 1 cut(s) | 3 |
| MhlI | GDGCHC | 1 cut(s) | 307 |
| MluCI | AATT | 4 cut(s) | 106, 243, 265, 294 |
| MlyI | GAGTC | 3 cut(s) | 91, 119, 122 |
| MnlI | CCTC | 1 cut(s) | 291 |
| Mph1103I | ATGCAT | 1 cut(s) | 274 |
| MseI | TTAA | 2 cut(s) | 38, 255 |
| MspCI | CTTAAG | 1 cut(s) | 254 |
| NdeII | GATC | 1 cut(s) | 3 |
| NlaIII | CATG | 1 cut(s) | 136 |
| NsiI | ATGCAT | 1 cut(s) | 274 |
| PflFI | GACNNNGTC | 1 cut(s) | 128 |
| PkrI | GCNGC | 2 cut(s) | 75, 342 |
| PleI | GAGTC | 3 cut(s) | 90, 119, 121 |
| PpsI | GAGTC | 3 cut(s) | 90, 119, 121 |
| PsiI | TTATAA | 1 cut(s) | 201 |
| PspPI | GGNCC | 1 cut(s) | 278 |
| PsyI | GACNNNGTC | 1 cut(s) | 128 |
| SaqAI | TTAA | 2 cut(s) | 38, 255 |
| SatI | GCNGC | 2 cut(s) | 74, 341 |
| Sau3AI | GATC | 1 cut(s) | 3 |
| Sau96I | GGNCC | 1 cut(s) | 278 |
| SchI | GAGTC | 3 cut(s) | 91, 119, 122 |
| SduI | GDGCHC | 1 cut(s) | 307 |
| SetI | ASST | 4 cut(s) | 62, 193, 312, 361 |
| SfaNI | GCATC | 1 cut(s) | 208 |
| SinI | GGWCC | 1 cut(s) | 278 |
| SmlI | CTYRAG | 1 cut(s) | 254 |
| SmoI | CTYRAG | 1 cut(s) | 254 |
| Sse9I | AATT | 4 cut(s) | 106, 243, 265, 294 |
| SsiI | CCGC | 1 cut(s) | 341 |
| TaaI | ACNGT | 1 cut(s) | 171 |
| TasI | AATT | 4 cut(s) | 106, 243, 265, 294 |
| TauI | GCSGC | 1 cut(s) | 343 |
| Tru1I | TTAA | 2 cut(s) | 38, 255 |
| Tru9I | TTAA | 2 cut(s) | 38, 255 |
| TseI | GCWGC | 1 cut(s) | 73 |
| TspGWI | ACGGA | 1 cut(s) | 24 |
| Tth111I | GACNNNGTC | 1 cut(s) | 128 |
| Vha464I | CTTAAG | 1 cut(s) | 254 |
| VpaK11BI | GGWCC | 1 cut(s) | 278 |
| Zsp2I | ATGCAT | 1 cut(s) | 274 |