Rh7BG456200

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
Physical Location & Seq
Reverse (-)
53873795 .. 53874157
363 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG456200.1

Sequence Viewer

Length: 363 bp
ATGAATTTTGAATCAACAATGTTCTTCTGTATCCACCAACATTTCTGTTCAGCCTGCCTCGCCTTTTTTCGGCACAATCCAATTCTTGCTCTCTCTCCTTTCACTTTTCTACATCCTCAGATTCCTTTCAACCCTCCAAAAGAAAGCACTTTTCTACATCCTCAGAACTTAATTGTCTGTGAAAGCAGGTTTCGACCCACTCTGAAACCTCTAAACTTACCCGCCAGTGACTTTAGAACTTTCACCCTTCACCTTCTTCCACCATCTCAGACCTCCCTTCCTTCTCTTCGTCTCTGCAACACCAAAACGCTGCGTTTCACAAACAATGCTCCTCCAATAGCTCTCCTCGCCGGAACAGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

120

Amino Acids

13.67

Weight (kDa)

9.07

Isoelectric Point (pI)

56.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0021622)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 177
AciI CCGC 1 cut(s) 222
AcsI RAATTY 1 cut(s) 4
AfiI CCNNNNNNNGG 1 cut(s) 69
AgsI TTSAA 2 cut(s) 11, 130
AluBI AGCT 1 cut(s) 341
AluI AGCT 1 cut(s) 341
Alw26I GTCTC 1 cut(s) 296
ApeKI GCWGC 1 cut(s) 310
ApoI RAATTY 1 cut(s) 4
AsuHPI GGTGA 2 cut(s) 235, 242
BbvI GCAGC 1 cut(s) 297
BccI CCATC 1 cut(s) 271
BciVI GTATCC 1 cut(s) 41
BcoDI GTCTC 1 cut(s) 296
BfuAI ACCTGC 1 cut(s) 177
BfuI GTATCC 1 cut(s) 41
BisI GCNGC 1 cut(s) 311
BlsI GCNGC 1 cut(s) 312
Bsc4I CCNNNNNNNGG 1 cut(s) 69
Bse1I ACTGG 1 cut(s) 225
BseGI GGATG 2 cut(s) 112, 157
BseLI CCNNNNNNNGG 1 cut(s) 69
BseMII CTCAG 3 cut(s) 131, 176, 281
BseNI ACTGG 1 cut(s) 225
BseRI GAGGAG 2 cut(s) 321, 335
BseXI GCAGC 1 cut(s) 297
BsiSI CCGG 1 cut(s) 351
BslI CCNNNNNNNGG 1 cut(s) 69
BsmAI GTCTC 1 cut(s) 296
BsmBI CGTCTC 1 cut(s) 296
BspACI CCGC 1 cut(s) 222
BspCNI CTCAG 3 cut(s) 130, 175, 280
BspMI ACCTGC 1 cut(s) 177
BsrI ACTGG 1 cut(s) 225
Bst6I CTCTTC 1 cut(s) 291
BstC8I GCNNGC 1 cut(s) 55
BstDEI CTNAG 3 cut(s) 117, 162, 267
BstF5I GGATG 2 cut(s) 112, 157
BstMAI GTCTC 1 cut(s) 296
BstMWI GCNNNNNNNGC 2 cut(s) 59, 347
BstV1I GCAGC 1 cut(s) 297
BsuI GTATCC 1 cut(s) 41
BtsCI GGATG 2 cut(s) 112, 157
BtsIMutI CAGTG 1 cut(s) 232
BveI ACCTGC 1 cut(s) 177
Cac8I GCNNGC 1 cut(s) 55
CviJI RGCY 2 cut(s) 53, 341
CviKI_1 RGCY 2 cut(s) 53, 341
DdeI CTNAG 3 cut(s) 117, 162, 267
Eam1104I CTCTTC 1 cut(s) 291
EarI CTCTTC 1 cut(s) 291
Esp3I CGTCTC 1 cut(s) 296
FauI CCCGC 1 cut(s) 229
Fnu4HI GCNGC 1 cut(s) 311
FokI GGATG 2 cut(s) 99, 144
Fsp4HI GCNGC 1 cut(s) 311
GluI GCNGC 1 cut(s) 311
HapII CCGG 1 cut(s) 351
HinfI GANTC 2 cut(s) 11, 121
HpaII CCGG 1 cut(s) 351
HphI GGTGA 2 cut(s) 235, 242
Hpy188I TCNGA 4 cut(s) 120, 165, 204, 270
HpyAV CCTTC 4 cut(s) 257, 263, 287, 291
HpyCH4V TGCA 1 cut(s) 297
HpyF10VI GCNNNNNNNGC 2 cut(s) 59, 347
HpyF3I CTNAG 3 cut(s) 117, 162, 267
LmnI GCTCC 1 cut(s) 334
LpnPI CCDG 3 cut(s) 67, 172, 238
Lsp1109I GCAGC 1 cut(s) 297
MaeIII GTNAC 1 cut(s) 227
MboII GAAGA 3 cut(s) 16, 248, 278
MluCI AATT 3 cut(s) 4, 81, 171
MnlI CCTC 8 cut(s) 68, 126, 144, 171, 219, 283, 342, 356
MseI TTAA 1 cut(s) 170
MspI CCGG 1 cut(s) 351
MwoI GCNNNNNNNGC 2 cut(s) 59, 347
NmuCI GTSAC 1 cut(s) 227
PfeI GAWTC 2 cut(s) 11, 121
PkrI GCNGC 1 cut(s) 312
SaqAI TTAA 1 cut(s) 170
SatI GCNGC 1 cut(s) 311
SetI ASST 5 cut(s) 191, 211, 255, 275, 343
SgeI CNNG 7 cut(s) 66, 71, 98, 199, 233, 237, 359
Sse9I AATT 3 cut(s) 4, 81, 171
SsiI CCGC 1 cut(s) 222
TaqI TCGA 1 cut(s) 193
TasI AATT 3 cut(s) 4, 81, 171
TfiI GAWTC 2 cut(s) 11, 121
Tru1I TTAA 1 cut(s) 170
Tru9I TTAA 1 cut(s) 170
TscAI CASTG 1 cut(s) 232
TseFI GTSAC 1 cut(s) 227
TseI GCWGC 1 cut(s) 310
Tsp45I GTSAC 1 cut(s) 227
TspDTI ATGAA 1 cut(s) 17
TspRI CASTG 1 cut(s) 232
XapI RAATTY 1 cut(s) 4
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.