Rh7CG084700

embryogenesis-associated protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0006715
Physical Location & Seq
Forward (+)
6121787 .. 6124853
3067 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG084700.1

Sequence Viewer

Length: 969 bp
ATGGCCAGAGCCTTCTTGGGCTTCTCACCTCCAATACCCTACTTCCGCCAAGTGTCTCACCTCCACAGGCCGACTCCCCCATCCGCCTTCCACGTCAGCTCAACAACCGCCGCACCCATGGCCCAGCACCACCCTTCCCTCGAAATCCTCGGCGGCGCCAAAGACACATTCCTCCCCGCCCTCCCCTCCCTGACCCGACCCTATAACCCGTTTCCCGTCTTCGCCTGGAACCGCCACGTGGAGACCATCTTCGCCGCCTTCTTCCGGTCCACCCCCGACATTAAGCTCCGCCGCGAGTGCCTCCGTACAAAAGACGACGGCTCCGTCTCTCTCGACTGGGTCCCCGGCGACGACCGCGTCCTGCCCGCCGATTCTCCCCTCCTCATTCTCCTGCCAGGTTTAACCGGAGGAAGTGAGGATTCGTATGTGAGGCACATGCTGATTAGAGCTAGAGATTGTGGGTGGCGGGTTGTGGTGTTCAACAGCCGCGGTTGTGGTGCTAGCCCTGTGACCACTCCTCAGTTCTATTCGGCTTCATTTTTAGGAGATATACGTGAGGTAGTGGACCATGTTGGTGGGAGGTATCCGGAAGCTAATTTATATGCGGTAGGCTGGTCTCTTGGTGCTAACATTCTCGTTCGGTATTTGGGTCAGGAGTCTAATACGTGCCGTCTCTCTGGTGCTGTATCACTGTGTAATCCTTTCAATCTGGTGATCGCAGATGAGGATTTCCATAAGGGATTCAATAATGTTTATGACAAAGCTCTATCAAGTGCTCTCTGCAAAATTTTCAAGAAGCATGCATTGCTTTTTGAAGACATGGGTGGTGAATATAATATCCCATTGGCTGCTAATGCCAAATCTGTCAGGGACTTTGATGAAGGACTAACTCGTGGTATATATGTCGTGCACTTGAAACCTTTTTGTTTTTTGGATTGGGGTTATTATAATTTGACATTAATCTGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Abhydrolase_1

Protein Analysis

322

Amino Acids

35.79

Weight (kDa)

7.64

Isoelectric Point (pI)

44.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Abhydrolase_1 PF00561 126 - 263 5.5e-14 alpha/beta hydrolase fold
Abhydrolase_6 PF12697 128 - 245 7.6e-08 Alpha/beta hydrolase family
Hydrolase_4 PF12146 151 - 235 3.6e-07 Serine aminopeptidase, S33
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 948
AasI GACNNNNNNGTC 2 cut(s) 323, 356
AccB1I GGYRCC 1 cut(s) 155
AccII CGCG 3 cut(s) 294, 357, 489
AccIII TCCGGA 1 cut(s) 586
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 1 cut(s) 786
AcvI CACGTG 1 cut(s) 238
AcyI GRCGYC 1 cut(s) 156
AfaI GTAC 1 cut(s) 307
AfiI CCNNNNNNNGG 2 cut(s) 238, 264
AgsI TTSAA 6 cut(s) 481, 706, 745, 793, 815, 916
AjiI CACGTC 1 cut(s) 94
AjnI CCWGG 2 cut(s) 224, 394
AjuI GAANNNNNNNTTGG 2 cut(s) 152, 184
AluBI AGCT 5 cut(s) 99, 286, 449, 593, 764
AluI AGCT 5 cut(s) 99, 286, 449, 593, 764
Alw21I GWGCWC 2 cut(s) 778, 912
Alw26I GTCTC 5 cut(s) 60, 236, 331, 621, 677
Alw44I GTGCAC 1 cut(s) 908
Aor13HI TCCGGA 1 cut(s) 586
AoxI GGCC 3 cut(s) 3, 68, 120
ApaLI GTGCAC 1 cut(s) 908
ApeKI GCWGC 1 cut(s) 848
ApoI RAATTY 1 cut(s) 786
AseI ATTAAT 1 cut(s) 959
AspLEI GCGC 1 cut(s) 158
AspS9I GGNCC 4 cut(s) 121, 267, 340, 565
AsuC2I CCSGG 1 cut(s) 345
AsuHPI GGTGA 4 cut(s) 18, 50, 724, 839
AsuNHI GCTAGC 1 cut(s) 500
AvaII GGWCC 3 cut(s) 267, 340, 565
BaeGI GKGCMC 1 cut(s) 912
BalI TGGCCA 1 cut(s) 5
BanI GGYRCC 1 cut(s) 155
BauI CACGAG 1 cut(s) 891
BbrPI CACGTG 1 cut(s) 238
BbsI GAAGAC 2 cut(s) 211, 822
Bbv12I GWGCWC 2 cut(s) 778, 912
BbvI GCAGC 1 cut(s) 835
BccI CCATC 2 cut(s) 88, 254
BceAI ACGGC 2 cut(s) 334, 654
BciT130I CCWGG 2 cut(s) 226, 396
BciVI GTATCC 1 cut(s) 594
BcnI CCSGG 1 cut(s) 345
BcoDI GTCTC 5 cut(s) 60, 236, 331, 621, 677
BfaI CTAG 2 cut(s) 450, 501
BfoI RGCGCY 1 cut(s) 159
BfuI GTATCC 1 cut(s) 594
BisI GCNGC 6 cut(s) 111, 154, 255, 292, 487, 849
BlsI GCNGC 6 cut(s) 112, 155, 256, 293, 488, 850
Bme1390I CCNGG 3 cut(s) 226, 345, 396
Bme18I GGWCC 3 cut(s) 267, 340, 565
BmgBI CACGTC 1 cut(s) 94
BmgT120I GGNCC 4 cut(s) 121, 267, 340, 565
BmiI GGNNCC 5 cut(s) 157, 230, 322, 341, 342
BmrFI CCNGG 3 cut(s) 226, 345, 396
BmrI ACTGGG 1 cut(s) 346
BmtI GCTAGC 1 cut(s) 504
BmuI ACTGGG 1 cut(s) 346
BpiI GAAGAC 2 cut(s) 211, 822
BpuMI CCSGG 1 cut(s) 345
BsaAI YACGTR 3 cut(s) 238, 554, 666
BsaHI GRCGYC 1 cut(s) 156
BsaI GGTCTC 2 cut(s) 236, 621
BsaJI CCNNGG 4 cut(s) 117, 148, 343, 487
BsaWI WCCGGW 3 cut(s) 264, 404, 586
BsaXI ACNNNNNCTCC 2 cut(s) 305, 335
Bsc4I CCNNNNNNNGG 2 cut(s) 238, 264
Bse1I ACTGG 1 cut(s) 341
Bse3DI GCAATG 1 cut(s) 803
BseAI TCCGGA 1 cut(s) 586
BseBI CCWGG 2 cut(s) 226, 396
BseDI CCNNGG 4 cut(s) 117, 148, 343, 487
BseGI GGATG 1 cut(s) 80
BseLI CCNNNNNNNGG 2 cut(s) 238, 264
BseMI GCAATG 1 cut(s) 803
BseMII CTCAG 1 cut(s) 533
BseNI ACTGG 1 cut(s) 341
BseRI GAGGAG 2 cut(s) 371, 507
BseSI GKGCMC 1 cut(s) 912
BseXI GCAGC 1 cut(s) 835
BseYI CCCAGC 1 cut(s) 123
Bsh1236I CGCG 3 cut(s) 294, 357, 489
Bsh1285I CGRYCG 1 cut(s) 355
BshFI GGCC 3 cut(s) 5, 70, 122
BshNI GGYRCC 1 cut(s) 155
BsiEI CGRYCG 1 cut(s) 355
BsiHKAI GWGCWC 2 cut(s) 778, 912
BsiSI CCGG 4 cut(s) 265, 345, 405, 587
BslFI GGGAC 2 cut(s) 326, 884
BslI CCNNNNNNNGG 2 cut(s) 238, 264
BsmAI GTCTC 5 cut(s) 60, 236, 331, 621, 677
BsmBI CGTCTC 2 cut(s) 331, 677
BsmFI GGGAC 2 cut(s) 326, 884
BsnI GGCC 3 cut(s) 5, 70, 122
Bso31I GGTCTC 2 cut(s) 236, 621
Bsp1286I GDGCHC 2 cut(s) 778, 912
Bsp13I TCCGGA 1 cut(s) 586
Bsp143I GATC 1 cut(s) 714
Bsp19I CCATGG 1 cut(s) 117
BspANI GGCC 3 cut(s) 5, 70, 122
BspCNI CTCAG 1 cut(s) 532
BspEI TCCGGA 1 cut(s) 586
BspFNI CGCG 3 cut(s) 294, 357, 489
BspLI GGNNCC 5 cut(s) 157, 230, 322, 341, 342
BspOI GCTAGC 1 cut(s) 504
BspT107I GGYRCC 1 cut(s) 155
BspTNI GGTCTC 2 cut(s) 236, 621
BsrDI GCAATG 1 cut(s) 803
BsrI ACTGG 1 cut(s) 341
BssECI CCNNGG 4 cut(s) 117, 148, 343, 487
BssMI GATC 1 cut(s) 714
BssNI GRCGYC 1 cut(s) 156
BssSI CACGAG 1 cut(s) 891
BssT1I CCWWGG 1 cut(s) 117
Bst2BI CACGAG 1 cut(s) 891
Bst2UI CCWGG 2 cut(s) 226, 396
Bst4CI ACNGT 1 cut(s) 693
BstACI GRCGYC 1 cut(s) 156
BstAPI GCANNNNNTGC 1 cut(s) 805
BstBAI YACGTR 3 cut(s) 238, 554, 666
BstC8I GCNNGC 3 cut(s) 366, 502, 801
BstDEI CTNAG 1 cut(s) 519
BstDSI CCRYGG 2 cut(s) 117, 487
BstF5I GGATG 1 cut(s) 80
BstFNI CGCG 3 cut(s) 294, 357, 489
BstH2I RGCGCY 1 cut(s) 159
BstHHI GCGC 1 cut(s) 158
BstKTI GATC 1 cut(s) 717
BstMAI GTCTC 5 cut(s) 60, 236, 331, 621, 677
BstMBI GATC 1 cut(s) 714
BstMCI CGRYCG 1 cut(s) 355
BstMWI GCNNNNNNNGC 5 cut(s) 119, 297, 354, 805, 854
BstNI CCWGG 2 cut(s) 226, 396
BstNSI RCATGY 2 cut(s) 439, 803
BstSCI CCNGG 3 cut(s) 224, 343, 394
BstSLI GKGCMC 1 cut(s) 912
BstUI CGCG 3 cut(s) 294, 357, 489
BstV1I GCAGC 1 cut(s) 835
BstV2I GAAGAC 2 cut(s) 211, 822
BstXI CCANNNNNNTGG 1 cut(s) 575
BsuI GTATCC 1 cut(s) 594
BsuRI GGCC 3 cut(s) 5, 70, 122
BtgI CCRYGG 2 cut(s) 117, 487
BtrI CACGTC 1 cut(s) 94
BtsCI GGATG 1 cut(s) 80
BtsIMutI CAGTG 1 cut(s) 689
Cac8I GCNNGC 3 cut(s) 366, 502, 801
CfoI GCGC 1 cut(s) 158
Cfr13I GGNCC 4 cut(s) 121, 267, 340, 565
Cfr42I CCGCGG 1 cut(s) 490
CseI GACGC 1 cut(s) 346
Csp6I GTAC 1 cut(s) 306
CviAII CATG 5 cut(s) 118, 436, 569, 800, 820
CviQI GTAC 1 cut(s) 306
DdeI CTNAG 1 cut(s) 519
DinI GGCGCC 1 cut(s) 157
DpnI GATC 1 cut(s) 716
DpnII GATC 1 cut(s) 714
DrdI GACNNNNNNGTC 2 cut(s) 323, 356
DseDI GACNNNNNNGTC 2 cut(s) 323, 356
EaeI YGGCCR 1 cut(s) 3
EciI GGCGGA 3 cut(s) 35, 73, 278
Eco130I CCWWGG 1 cut(s) 117
Eco31I GGTCTC 2 cut(s) 236, 621
Eco47I GGWCC 3 cut(s) 267, 340, 565
Eco72I CACGTG 1 cut(s) 238
EcoO109I RGGNCCY 1 cut(s) 340
EcoRII CCWGG 2 cut(s) 224, 394
EcoT14I CCWWGG 1 cut(s) 117
EcoT22I ATGCAT 1 cut(s) 805
EgeI GGCGCC 1 cut(s) 157
EheI GGCGCC 1 cut(s) 157
ErhI CCWWGG 1 cut(s) 117
Esp3I CGTCTC 2 cut(s) 331, 677
FaeI CATG 5 cut(s) 121, 439, 572, 803, 823
FaqI GGGAC 2 cut(s) 326, 884
FatI CATG 5 cut(s) 117, 435, 568, 799, 819
FauI CCCGC 3 cut(s) 184, 373, 459
Fnu4HI GCNGC 6 cut(s) 111, 154, 255, 292, 487, 849
FokI GGATG 1 cut(s) 67
Fsp4HI GCNGC 6 cut(s) 111, 154, 255, 292, 487, 849
FspBI CTAG 2 cut(s) 450, 501
GlaI GCGC 1 cut(s) 157
GluI GCNGC 6 cut(s) 111, 154, 255, 292, 487, 849
GsaI CCCAGC 1 cut(s) 127
HaeII RGCGCY 1 cut(s) 159
HaeIII GGCC 3 cut(s) 5, 70, 122
HapII CCGG 4 cut(s) 265, 345, 405, 587
HgaI GACGC 1 cut(s) 346
HhaI GCGC 1 cut(s) 158
Hin1I GRCGYC 1 cut(s) 156
Hin1II CATG 5 cut(s) 121, 439, 572, 803, 823
Hin6I GCGC 1 cut(s) 156
HinP1I GCGC 1 cut(s) 156
HinfI GANTC 5 cut(s) 73, 371, 419, 656, 741
HpaII CCGG 4 cut(s) 265, 345, 405, 587
HphI GGTGA 4 cut(s) 18, 50, 724, 839
Hpy166II GTNNAC 3 cut(s) 270, 565, 910
Hpy188III TCNNGA 4 cut(s) 332, 587, 653, 793
Hpy8I GTNNAC 3 cut(s) 270, 565, 910
Hpy99I CGWCG 2 cut(s) 320, 353
HpyAV CCTTC 5 cut(s) 22, 97, 144, 268, 875
HpyCH4III ACNGT 1 cut(s) 693
HpyCH4IV ACGT 4 cut(s) 93, 237, 553, 665
HpyCH4V TGCA 3 cut(s) 783, 803, 910
HpyF10VI GCNNNNNNNGC 5 cut(s) 119, 297, 354, 805, 854
HpyF3I CTNAG 1 cut(s) 519
HpySE526I ACGT 4 cut(s) 93, 237, 553, 665
Hsp92I GRCGYC 1 cut(s) 156
Hsp92II CATG 5 cut(s) 121, 439, 572, 803, 823
HspAI GCGC 1 cut(s) 156
KasI GGCGCC 1 cut(s) 155
KflI GGGWCCC 1 cut(s) 340
Kpn2I TCCGGA 1 cut(s) 586
KspI CCGCGG 1 cut(s) 490
Kzo9I GATC 1 cut(s) 714
LmnI GCTCC 2 cut(s) 291, 326
Lsp1109I GCAGC 1 cut(s) 835
MaeI CTAG 2 cut(s) 450, 501
MaeII ACGT 4 cut(s) 93, 237, 553, 665
MaeIII GTNAC 1 cut(s) 508
MalI GATC 1 cut(s) 716
MboI GATC 1 cut(s) 714
MboII GAAGA 4 cut(s) 211, 241, 253, 827
MhlI GDGCHC 2 cut(s) 778, 912
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 3 cut(s) 595, 786, 949
MluNI TGGCCA 1 cut(s) 5
Mly113I GGCGCC 1 cut(s) 156
MlyI GAGTC 2 cut(s) 67, 665
Mox20I TGGCCA 1 cut(s) 5
Mph1103I ATGCAT 1 cut(s) 805
MroI TCCGGA 1 cut(s) 586
MscI TGGCCA 1 cut(s) 5
MseI TTAA 3 cut(s) 282, 401, 959
MslI CAYNNNNRTG 1 cut(s) 573
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 1 cut(s) 489
MspI CCGG 4 cut(s) 265, 345, 405, 587
MspR9I CCNGG 3 cut(s) 226, 345, 396
MvaI CCWGG 2 cut(s) 226, 396
MvnI CGCG 3 cut(s) 294, 357, 489
MwoI GCNNNNNNNGC 5 cut(s) 119, 297, 354, 805, 854
NarI GGCGCC 1 cut(s) 156
NciI CCSGG 1 cut(s) 345
NcoI CCATGG 1 cut(s) 117
NdeII GATC 1 cut(s) 714
NheI GCTAGC 1 cut(s) 500
NlaIII CATG 5 cut(s) 121, 439, 572, 803, 823
NlaIV GGNNCC 5 cut(s) 157, 230, 322, 341, 342
NmeAIII GCCGAG 1 cut(s) 129
NmuCI GTSAC 1 cut(s) 508
NsiI ATGCAT 1 cut(s) 805
NspI RCATGY 2 cut(s) 439, 803
PaeI GCATGC 1 cut(s) 803
PcsI WCGNNNNNNNCGW 1 cut(s) 321
PfeI GAWTC 3 cut(s) 371, 419, 741
PflFI GACNNNGTC 2 cut(s) 338, 356
PkrI GCNGC 6 cut(s) 112, 155, 256, 293, 488, 850
PleI GAGTC 2 cut(s) 67, 664
PluTI GGCGCC 1 cut(s) 159
PmaCI CACGTG 1 cut(s) 238
PmlI CACGTG 1 cut(s) 238
PpsI GAGTC 2 cut(s) 67, 664
Ppu21I YACGTR 3 cut(s) 238, 554, 666
PpuMI RGGWCCY 1 cut(s) 340
PshBI ATTAAT 1 cut(s) 959
PsiI TTATAA 1 cut(s) 948
Psp5II RGGWCCY 1 cut(s) 340
Psp6I CCWGG 2 cut(s) 224, 394
PspCI CACGTG 1 cut(s) 238
PspFI CCCAGC 1 cut(s) 123
PspGI CCWGG 2 cut(s) 224, 394
PspN4I GGNNCC 5 cut(s) 157, 230, 322, 341, 342
PspPI GGNCC 4 cut(s) 121, 267, 340, 565
PspPPI RGGWCCY 1 cut(s) 340
PsyI GACNNNGTC 2 cut(s) 338, 356
RsaI GTAC 1 cut(s) 307
RsaNI GTAC 1 cut(s) 306
RseI CAYNNNNRTG 1 cut(s) 573
SacII CCGCGG 1 cut(s) 490
SaqAI TTAA 3 cut(s) 282, 401, 959
SatI GCNGC 6 cut(s) 111, 154, 255, 292, 487, 849
Sau3AI GATC 1 cut(s) 714
Sau96I GGNCC 4 cut(s) 121, 267, 340, 565
SchI GAGTC 2 cut(s) 67, 665
ScrFI CCNGG 3 cut(s) 226, 345, 396
SduI GDGCHC 2 cut(s) 778, 912
SfoI GGCGCC 1 cut(s) 157
Sfr303I CCGCGG 1 cut(s) 490
SgrBI CCGCGG 1 cut(s) 490
SinI GGWCC 3 cut(s) 267, 340, 565
SmiMI CAYNNNNRTG 1 cut(s) 573
SphI GCATGC 1 cut(s) 803
Sse9I AATT 3 cut(s) 595, 786, 949
SspDI GGCGCC 1 cut(s) 155
SspMI CTAG 2 cut(s) 450, 501
StyD4I CCNGG 3 cut(s) 224, 343, 394
StyI CCWWGG 1 cut(s) 117
TaaI ACNGT 1 cut(s) 693
TaiI ACGT 4 cut(s) 96, 240, 556, 668
TaqI TCGA 2 cut(s) 141, 333
TasI AATT 3 cut(s) 595, 786, 949
TauI GCSGC 5 cut(s) 113, 156, 257, 294, 489
TfiI GAWTC 3 cut(s) 371, 419, 741
Tru1I TTAA 3 cut(s) 282, 401, 959
Tru9I TTAA 3 cut(s) 282, 401, 959
TscAI CASTG 1 cut(s) 696
TseFI GTSAC 1 cut(s) 508
TseI GCWGC 1 cut(s) 848
Tsp45I GTSAC 1 cut(s) 508
TspDTI ATGAA 2 cut(s) 525, 894
TspGWI ACGGA 2 cut(s) 293, 313
TspRI CASTG 1 cut(s) 696
Tth111I GACNNNGTC 2 cut(s) 338, 356
VneI GTGCAC 1 cut(s) 908
VpaK11BI GGWCC 3 cut(s) 267, 340, 565
VspI ATTAAT 1 cut(s) 959
XapI RAATTY 1 cut(s) 786
XceI RCATGY 2 cut(s) 439, 803
XcmI CCANNNNNNNNNTGG 1 cut(s) 13
XspI CTAG 2 cut(s) 450, 501
Zsp2I ATGCAT 1 cut(s) 805
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.