Rh7DG283800

MOB kinase activator-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0022813
Physical Location & Seq
Reverse (-)
30912335 .. 30917566
5232 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG283800.1

Sequence Viewer

Length: 264 bp
ATGCCTTCGCCGCCGCAAAGCTTTAGGGGGGCTCAGCTGAGAAAGCACATTGACGCAACACTAGGTAGTGGGAACCTAAGAGAATCAGTAAAGCTTCCAACTGGAGAAGATTTAAATGAGTGGCTTGCTGTCAACAGTTTTGGATGCACCGATCAGTTTATGGCAAGACGATTTTGTAGTCTCTTTGATTCTGCAGAAAATGAGGAGTGGAATGACTTAATATGCAATGTTAGACTCAAAATGTTCCAATCTGGAGCAAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04111 ko04390 ko04391 ko04392 map04111 map04390 map04391 map04392
Pfam Domains
Protein Families
Mob1_phocein

Protein Analysis

87

Amino Acids

9.81

Weight (kDa)

5.73

Isoelectric Point (pI)

66.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mob1_phocein PF03637 19 - 52 4e-07 Mob1/phocein family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0022813)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr7g0237191 RchiOBHm_Chr7g0237201
rosa_rugosa Rorug04G0017400
rosa_samantha Rh7DG283800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 11, 14
AluBI AGCT 3 cut(s) 21, 37, 94
AluI AGCT 3 cut(s) 21, 37, 94
Alw26I GTCTC 1 cut(s) 185
BanII GRGCYC 1 cut(s) 34
BcoDI GTCTC 1 cut(s) 185
BfaI CTAG 1 cut(s) 62
BfmI CTRYAG 1 cut(s) 192
BisI GCNGC 2 cut(s) 11, 14
BlpI GCTNAGC 1 cut(s) 33
BlsI GCNGC 2 cut(s) 12, 15
BmiI GGNNCC 1 cut(s) 74
BmsI GCATC 1 cut(s) 134
BpmI CTGGAG 1 cut(s) 123
Bpu1102I GCTNAGC 1 cut(s) 33
Bse1I ACTGG 1 cut(s) 106
Bse3DI GCAATG 1 cut(s) 232
BseGI GGATG 1 cut(s) 149
BseMI GCAATG 1 cut(s) 232
BseMII CTCAG 2 cut(s) 29, 47
BseNI ACTGG 1 cut(s) 106
BseRI GAGGAG 1 cut(s) 218
BsmAI GTCTC 1 cut(s) 185
Bsp1286I GDGCHC 1 cut(s) 34
Bsp143I GATC 1 cut(s) 151
Bsp1720I GCTNAGC 1 cut(s) 33
BspACI CCGC 2 cut(s) 11, 14
BspCNI CTCAG 2 cut(s) 30, 46
BspLI GGNNCC 1 cut(s) 74
BspMAI CTGCAG 1 cut(s) 196
BsrDI GCAATG 1 cut(s) 232
BsrI ACTGG 1 cut(s) 106
BssMI GATC 1 cut(s) 151
Bst4CI ACNGT 1 cut(s) 137
BstC8I GCNNGC 1 cut(s) 126
BstDEI CTNAG 3 cut(s) 33, 38, 77
BstF5I GGATG 1 cut(s) 149
BstKTI GATC 1 cut(s) 154
BstMAI GTCTC 1 cut(s) 185
BstMBI GATC 1 cut(s) 151
BstMWI GCNNNNNNNGC 2 cut(s) 10, 43
BstSFI CTRYAG 1 cut(s) 192
BtsCI GGATG 1 cut(s) 149
Cac8I GCNNGC 1 cut(s) 126
CseI GACGC 1 cut(s) 62
CviJI RGCY 5 cut(s) 21, 32, 37, 94, 124
CviKI_1 RGCY 5 cut(s) 21, 32, 37, 94, 124
DdeI CTNAG 3 cut(s) 33, 38, 77
DpnI GATC 1 cut(s) 153
DpnII GATC 1 cut(s) 151
DraI TTTAAA 1 cut(s) 114
Eco24I GRGCYC 1 cut(s) 34
EcoT38I GRGCYC 1 cut(s) 34
FaiI YATR 2 cut(s) 161, 223
Fnu4HI GCNGC 2 cut(s) 11, 14
FokI GGATG 1 cut(s) 156
FriOI GRGCYC 1 cut(s) 34
Fsp4HI GCNGC 2 cut(s) 11, 14
FspBI CTAG 1 cut(s) 62
GluI GCNGC 2 cut(s) 11, 14
GsuI CTGGAG 1 cut(s) 123
HgaI GACGC 1 cut(s) 62
HincII GTYRAC 1 cut(s) 133
HindII GTYRAC 1 cut(s) 133
HindIII AAGCTT 2 cut(s) 19, 92
HinfI GANTC 3 cut(s) 83, 188, 234
Hpy166II GTNNAC 1 cut(s) 133
Hpy188III TCNNGA 1 cut(s) 252
Hpy8I GTNNAC 1 cut(s) 133
HpyAV CCTTC 1 cut(s) 15
HpyCH4III ACNGT 1 cut(s) 137
HpyCH4V TGCA 3 cut(s) 147, 194, 225
HpyF10VI GCNNNNNNNGC 2 cut(s) 10, 43
HpyF3I CTNAG 3 cut(s) 33, 38, 77
Kzo9I GATC 1 cut(s) 151
LmnI GCTCC 1 cut(s) 254
LpnPI CCDG 2 cut(s) 87, 237
LweI GCATC 1 cut(s) 134
MaeI CTAG 1 cut(s) 62
MalI GATC 1 cut(s) 153
MboI GATC 1 cut(s) 151
MboII GAAGA 1 cut(s) 119
MhlI GDGCHC 1 cut(s) 34
MlyI GAGTC 1 cut(s) 228
MmeI TCCRAC 1 cut(s) 122
MnlI CCTC 1 cut(s) 196
MseI TTAA 2 cut(s) 113, 218
MspA1I CMGCKG 1 cut(s) 37
MwoI GCNNNNNNNGC 2 cut(s) 10, 43
NdeII GATC 1 cut(s) 151
NlaIV GGNNCC 1 cut(s) 74
PfeI GAWTC 2 cut(s) 83, 188
PkrI GCNGC 2 cut(s) 12, 15
PleI GAGTC 1 cut(s) 228
PpsI GAGTC 1 cut(s) 228
PspN4I GGNNCC 1 cut(s) 74
PstI CTGCAG 1 cut(s) 196
PvuII CAGCTG 1 cut(s) 37
SaqAI TTAA 2 cut(s) 113, 218
SatI GCNGC 2 cut(s) 11, 14
Sau3AI GATC 1 cut(s) 151
SchI GAGTC 1 cut(s) 228
SduI GDGCHC 1 cut(s) 34
SetI ASST 5 cut(s) 23, 39, 67, 78, 96
SfaNI GCATC 1 cut(s) 134
SfcI CTRYAG 1 cut(s) 192
SgeI CNNG 4 cut(s) 74, 114, 137, 177
SmiI ATTTAAAT 1 cut(s) 114
SsiI CCGC 2 cut(s) 11, 14
SspMI CTAG 1 cut(s) 62
SwaI ATTTAAAT 1 cut(s) 114
TaaI ACNGT 1 cut(s) 137
TauI GCSGC 2 cut(s) 13, 16
TfiI GAWTC 2 cut(s) 83, 188
Tru1I TTAA 2 cut(s) 113, 218
Tru9I TTAA 2 cut(s) 113, 218
XspI CTAG 1 cut(s) 62
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.