Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0019381

Physical Location & Seq

Genomic Coordinates Reverse (-)

4278542 .. 4280583

Gene Structure 2042 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G004520.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1344 bp

ATGCACCTTCCTTTGGTTGAGACGCTGGAACCTCTCCTGCTTGTCAACAGCACAACCGGTCTCAAGAACCGTGGCGCCACTCCTTTTCAGGGGCCAGGTGAACTAATTAAGTTTGCATGGTACAAGGCTTCAGTCATAGATCCCGGCACTCTTGGACTTTTAACCATTACAGAAAATAAAATTGAGTTCTGTGCCGATCCCAAATATGCCACAAAGCTATTTGAAGTGGGGCTTGAACATATTAAAGGACATCAACACACCAAAGAAGGATCAAATAAACCAGCCTGGCTAAATCTCAACACAGATAAGGATGTGACTAGGACTAGGTACATCTTTGAGCTCTATAGTTATCCAGATCTTCATGAATGCGTTGAATTTTTACGCAAGTTGCTTCTTGAGTTTAGCTGTAGAAAAGTTGGTTACAAAAGTTCGATGATATTTGACACCAAGCCTAGTAGAAAGGTTACATTTACTGAAGAGATTAAGCACCGGATATTTGCTCTGAGGCCAGCTGTGCACCAGGCATATCTTAACAGTGTAGTTCCCGGAAAGACCAAAGAGCATGACTTCTGGAGAAAGTATTTCAATGCTGAACAGGTCCGAATGTATAGTGCAAAGAATGTTGTTGCAGCTGAAGCAGAAGCTACTGAGGATGAGGAAAAGGCAGTTTTTTTGAAGGATGATGAACTAGTTGCAAGGGAAGCTCGTAGGAAGATTCGACGTGTTGATCCAACTTTGGATATGGTAGCTGATCAAAGGGATGATCATACACATCTTCCTTTGCATGGGATCTTTCACCACGACATAAATGATGAAGAAGTGCAGAATAATAATCAAAAGAGGTGGAGGACTTTGCGGCAAGATGTTAACAGACAAGGAGCTGTTGTTCTTCGAGGAATAAGAGCTGTGGAAGAGGAATTTACACGGCGTAGGTCAAAACAGGAATATTCTGATGATGAGAGTAGTGACGTGCAGCAGGAGAAGAGACTTGATAGGATTAGTTGGATAACTGAGATAGAGGACCTGGAAGAACCTCATTCTGTTGCTCCATTATGTTTTGATACGGATCTTTGGGACTACTCGGAACTAGCTAGCGCTAATGCAGGGCTTAAAACTTTGGACGATTCAAGTACTGGAAGTGAACAAAATAAAAAGGTGGTTACTGCTCAGGAAGCATACGGCTCTTTGAGGGAGTCTATATCTGAAATTAAGAGCCTTGGGCTGAGCAATGCCACAGTTGCACTGGAATTCAATGTTGAGGATTTTCTCAAGGTAGTAGGAAAAACTTCAGGTATCAAGGATCGACCTGCGACAGACATGGACATGTTGCCCAAAACCAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000428 GO:0000439 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005667 GO:0005675 GO:0006139 GO:0006259 GO:0006281 GO:0006351 GO:0006355 GO:0006357 GO:0006360 GO:0006366 GO:0006464 GO:0006468 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0016070 GO:0016310 GO:0016591 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019538 GO:0030880 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032774 GO:0032806 GO:0032991 GO:0033554 GO:0034641 GO:0034645 GO:0034654 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0044798 GO:0046483 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051716 GO:0055029 GO:0060255 GO:0061695 GO:0065007 GO:0070013 GO:0070816 GO:0071704 GO:0080090 GO:0090304 GO:0090575 GO:0097659 GO:1901360 GO:1901362 GO:1901564 GO:1901576 GO:1902494 GO:1902554 GO:1902911 GO:1903506 GO:1990234 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko03022 ko03420 ko05203 map03022 map03420 map05203

Pfam Domains

Protein Families

BSD PH_TFIIH

Protein Analysis

447

Amino Acids

51.23

Weight (kDa)

5.86

Isoelectric Point (pI)

43.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BSD	PF03909	158 - 197	1.8e-06	BSD domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0019381)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr2g0090241
rosa_laevigata	RLG00000016090
rosa_multiflora	Rmu_sc0000436.1_g000001 Rmu_sc0012828.1_g000002
rosa_roxburghii	Rroxscaffold_2G00151360
rosa_rugosa	Rorug02G0005600
rosa_samantha	Rh2DG051600
rosa_wichuraiana	Rw2G004520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1315
AccB1I	GGYRCC	1 cut(s)	74
AciI	CCGC	1 cut(s)	856
AclWI	GGATC	7 cut(s)	134, 191, 277, 722, 797, 1074, 1308
AcsI	RAATTY	3 cut(s)	374, 917, 1247
AcuI	CTGAAG	4 cut(s)	114, 495, 654, 1272
AcyI	GRCGYC	1 cut(s)	75
AfaI	GTAC	3 cut(s)	122, 329, 1132
AfeI	AGCGCT	1 cut(s)	1096
AfiI	CCNNNNNNNGG	3 cut(s)	13, 89, 785
AflIII	ACRYGT	2 cut(s)	721, 1323
AgeI	ACCGGT	1 cut(s)	56
AgsI	TTSAA	7 cut(s)	224, 236, 374, 586, 676, 1128, 1252
AhlI	ACTAGT	1 cut(s)	688
AjiI	CACGTC	2 cut(s)	722, 970
AjnI	CCWGG	4 cut(s)	94, 284, 519, 1023
AloI	GAACNNNNNNTCC	2 cut(s)	870, 902
Alw21I	GWGCWC	2 cut(s)	342, 519
Alw26I	GTCTC	3 cut(s)	14, 65, 979
Alw44I	GTGCAC	1 cut(s)	515
AlwI	GGATC	7 cut(s)	134, 191, 277, 722, 797, 1074, 1308
Aor51HI	AGCGCT	1 cut(s)	1096
AoxI	GGCC	2 cut(s)	92, 506
ApaLI	GTGCAC	1 cut(s)	515
ApeKI	GCWGC	2 cut(s)	629, 973
ApoI	RAATTY	3 cut(s)	374, 917, 1247
AsiGI	ACCGGT	1 cut(s)	56
Asp700I	GAANNNNTTC	1 cut(s)	1285
AspLEI	GCGC	2 cut(s)	77, 1097
AspS9I	GGNCC	3 cut(s)	92, 598, 1021
AsuC2I	CCSGG	2 cut(s)	144, 546
AsuHPI	GGTGA	2 cut(s)	110, 788
AsuNHI	GCTAGC	1 cut(s)	1091
AvaII	GGWCC	2 cut(s)	598, 1021
BaeGI	GKGCMC	1 cut(s)	519
BanI	GGYRCC	1 cut(s)	74
BanII	GRGCYC	1 cut(s)	342
Bbv12I	GWGCWC	2 cut(s)	342, 519
BbvI	GCAGC	2 cut(s)	641, 985
BceAI	ACGGC	2 cut(s)	941, 1195
BciT130I	CCWGG	4 cut(s)	96, 286, 521, 1025
BclI	TGATCA	2 cut(s)	751, 763
BcnI	CCSGG	2 cut(s)	144, 546
BcoDI	GTCTC	3 cut(s)	14, 65, 979
BcuI	ACTAGT	1 cut(s)	688
BfaI	CTAG	6 cut(s)	318, 324, 453, 689, 1088, 1092
BfmI	CTRYAG	2 cut(s)	343, 406
BfoI	RGCGCY	2 cut(s)	78, 1098
BfuAI	ACCTGC	1 cut(s)	1315
BglII	AGATCT	1 cut(s)	355
BisI	GCNGC	3 cut(s)	630, 857, 974
BlpI	GCTNAGC	1 cut(s)	1223
BlsI	GCNGC	3 cut(s)	631, 858, 975
BmcAI	AGTACT	1 cut(s)	1132
Bme1390I	CCNGG	6 cut(s)	96, 144, 286, 521, 546, 1025
Bme18I	GGWCC	2 cut(s)	598, 1021
BmgBI	CACGTC	2 cut(s)	722, 970
BmgT120I	GGNCC	3 cut(s)	92, 598, 1021
BmiI	GGNNCC	3 cut(s)	30, 76, 93
BmrFI	CCNGG	6 cut(s)	96, 144, 286, 521, 546, 1025
BmtI	GCTAGC	1 cut(s)	1095
BpmI	CTGGAG	1 cut(s)	592
Bpu10I	CCTNAGC	1 cut(s)	1167
Bpu1102I	GCTNAGC	1 cut(s)	1223
BpuEI	CTTGAG	3 cut(s)	47, 416, 1253
BpuMI	CCSGG	2 cut(s)	144, 546
BsaBI	GATNNNNATC	1 cut(s)	1065
BsaHI	GRCGYC	1 cut(s)	75
BsaI	GGTCTC	1 cut(s)	65
BsaJI	CCNNGG	2 cut(s)	70, 1216
BsaWI	WCCGGW	2 cut(s)	56, 489
BsaXI	ACNNNNNCTCC	2 cut(s)	870, 900
Bsc4I	CCNNNNNNNGG	3 cut(s)	13, 89, 785
Bse118I	RCCGGY	1 cut(s)	56
Bse1I	ACTGG	2 cut(s)	1138, 1248
Bse3DI	GCAATG	1 cut(s)	1234
Bse8I	GATNNNNATC	1 cut(s)	1065
BseBI	CCWGG	4 cut(s)	96, 286, 521, 1025
BseDI	CCNNGG	2 cut(s)	70, 1216
BseGI	GGATG	4 cut(s)	316, 658, 685, 766
BseJI	GATNNNNATC	1 cut(s)	1065
BseLI	CCNNNNNNNGG	3 cut(s)	13, 89, 785
BseMI	GCAATG	1 cut(s)	1234
BseMII	CTCAG	5 cut(s)	494, 639, 1002, 1181, 1214
BseNI	ACTGG	2 cut(s)	1138, 1248
BseSI	GKGCMC	1 cut(s)	519
BseXI	GCAGC	2 cut(s)	641, 985
BsgI	GTGCAG	2 cut(s)	842, 992
BshFI	GGCC	2 cut(s)	94, 508
BshNI	GGYRCC	1 cut(s)	74
BshTI	ACCGGT	1 cut(s)	56
BsiHKAI	GWGCWC	2 cut(s)	342, 519
BsiSI	CCGG	4 cut(s)	57, 144, 490, 546
BslFI	GGGAC	1 cut(s)	1088
BslI	CCNNNNNNNGG	3 cut(s)	13, 89, 785
BsmAI	GTCTC	3 cut(s)	14, 65, 979
BsmBI	CGTCTC	1 cut(s)	14
BsmFI	GGGAC	1 cut(s)	1088
BsmI	GAATGC	1 cut(s)	371
BsnI	GGCC	2 cut(s)	94, 508
Bso31I	GGTCTC	1 cut(s)	65
Bsp1286I	GDGCHC	2 cut(s)	342, 519
Bsp1720I	GCTNAGC	1 cut(s)	1223
BspACI	CCGC	1 cut(s)	856
BspANI	GGCC	2 cut(s)	94, 508
BspCNI	CTCAG	5 cut(s)	495, 640, 1003, 1180, 1215
BspHI	TCATGA	1 cut(s)	361
BspLI	GGNNCC	3 cut(s)	30, 76, 93
BspMI	ACCTGC	1 cut(s)	1315
BspOI	GCTAGC	1 cut(s)	1095
BspPI	GGATC	7 cut(s)	134, 191, 277, 722, 797, 1074, 1308
BspT107I	GGYRCC	1 cut(s)	74
BspTNI	GGTCTC	1 cut(s)	65
BsrDI	GCAATG	1 cut(s)	1234
BsrFI	RCCGGY	1 cut(s)	56
BsrI	ACTGG	2 cut(s)	1138, 1248
BssAI	RCCGGY	1 cut(s)	56
BssECI	CCNNGG	2 cut(s)	70, 1216
BssNI	GRCGYC	1 cut(s)	75
BssT1I	CCWWGG	1 cut(s)	1216
Bst2UI	CCWGG	4 cut(s)	96, 286, 521, 1025
Bst4CI	ACNGT	3 cut(s)	71, 536, 1237
Bst6I	CTCTTC	3 cut(s)	471, 906, 977
BstACI	GRCGYC	1 cut(s)	75
BstC8I	GCNNGC	2 cut(s)	510, 1093
BstDEI	CTNAG	5 cut(s)	503, 648, 1011, 1167, 1223
BstDSI	CCRYGG	1 cut(s)	70
BstF5I	GGATG	4 cut(s)	316, 658, 685, 766
BstH2I	RGCGCY	2 cut(s)	78, 1098
BstHHI	GCGC	2 cut(s)	77, 1097
BstMAI	GTCTC	3 cut(s)	14, 65, 979
BstMWI	GCNNNNNNNGC	5 cut(s)	514, 635, 701, 1172, 1238
BstNI	CCWGG	4 cut(s)	96, 286, 521, 1025
BstNSI	RCATGY	1 cut(s)	1327
BstSCI	CCNGG	6 cut(s)	94, 142, 284, 519, 544, 1023
BstSFI	CTRYAG	2 cut(s)	343, 406
BstSLI	GKGCMC	1 cut(s)	519
BstV1I	GCAGC	2 cut(s)	641, 985
BstX2I	RGATCY	4 cut(s)	139, 355, 789, 1066
BstYI	RGATCY	4 cut(s)	139, 355, 789, 1066
BsuRI	GGCC	2 cut(s)	94, 508
BtgI	CCRYGG	1 cut(s)	70
BtrI	CACGTC	2 cut(s)	722, 970
BtsCI	GGATG	4 cut(s)	316, 658, 685, 766
BtsIMutI	CAGTG	2 cut(s)	541, 1241
BveI	ACCTGC	1 cut(s)	1315
Cac8I	GCNNGC	2 cut(s)	510, 1093
CciI	TCATGA	1 cut(s)	361
CfoI	GCGC	2 cut(s)	77, 1097
Cfr10I	RCCGGY	1 cut(s)	56
Cfr13I	GGNCC	3 cut(s)	92, 598, 1021
CseI	GACGC	1 cut(s)	31
Csp6I	GTAC	3 cut(s)	121, 328, 1131
CspAI	ACCGGT	1 cut(s)	56
CspCI	CAANNNNNGTGG	4 cut(s)	52, 87, 824, 859
CviAII	CATG	6 cut(s)	117, 362, 563, 785, 1318, 1324
CviQI	GTAC	3 cut(s)	121, 328, 1131
DdeI	CTNAG	5 cut(s)	503, 648, 1011, 1167, 1223
DinI	GGCGCC	1 cut(s)	76
Eam1104I	CTCTTC	3 cut(s)	471, 906, 977
EarI	CTCTTC	3 cut(s)	471, 906, 977
Ecl136II	GAGCTC	1 cut(s)	340
Eco130I	CCWWGG	1 cut(s)	1216
Eco24I	GRGCYC	1 cut(s)	342
Eco31I	GGTCTC	1 cut(s)	65
Eco47I	GGWCC	2 cut(s)	598, 1021
Eco47III	AGCGCT	1 cut(s)	1096
Eco53kI	GAGCTC	1 cut(s)	340
Eco57I	CTGAAG	4 cut(s)	114, 495, 654, 1272
EcoICRI	GAGCTC	1 cut(s)	340
EcoO109I	RGGNCCY	1 cut(s)	1021
EcoRI	GAATTC	1 cut(s)	1247
EcoRII	CCWGG	4 cut(s)	94, 284, 519, 1023
EcoT14I	CCWWGG	1 cut(s)	1216
EcoT38I	GRGCYC	1 cut(s)	342
EgeI	GGCGCC	1 cut(s)	76
EheI	GGCGCC	1 cut(s)	76
ErhI	CCWWGG	1 cut(s)	1216
Esp3I	CGTCTC	1 cut(s)	14
FaeI	CATG	6 cut(s)	120, 365, 566, 788, 1321, 1327
FalI	AAGNNNNNCTT	2 cut(s)	216, 248
FaqI	GGGAC	1 cut(s)	1088
FatI	CATG	6 cut(s)	116, 361, 562, 784, 1317, 1323
FbaI	TGATCA	2 cut(s)	751, 763
Fnu4HI	GCNGC	3 cut(s)	630, 857, 974
FokI	GGATG	4 cut(s)	323, 665, 692, 773
FriOI	GRGCYC	1 cut(s)	342
Fsp4HI	GCNGC	3 cut(s)	630, 857, 974
FspBI	CTAG	6 cut(s)	318, 324, 453, 689, 1088, 1092
GlaI	GCGC	2 cut(s)	76, 1096
GluI	GCNGC	3 cut(s)	630, 857, 974
GsuI	CTGGAG	1 cut(s)	592
HaeII	RGCGCY	2 cut(s)	78, 1098
HaeIII	GGCC	2 cut(s)	94, 508
HapII	CCGG	4 cut(s)	57, 144, 490, 546
HgaI	GACGC	1 cut(s)	31
HhaI	GCGC	2 cut(s)	77, 1097
Hin1I	GRCGYC	1 cut(s)	75
Hin1II	CATG	6 cut(s)	120, 365, 566, 788, 1321, 1327
Hin6I	GCGC	2 cut(s)	75, 1095
HinP1I	GCGC	2 cut(s)	75, 1095
HincII	GTYRAC	2 cut(s)	46, 868
HindII	GTYRAC	2 cut(s)	46, 868
HinfI	GANTC	3 cut(s)	715, 1124, 1193
HpaI	GTTAAC	1 cut(s)	868
HpaII	CCGG	4 cut(s)	57, 144, 490, 546
HphI	GGTGA	2 cut(s)	110, 788
Hpy166II	GTNNAC	5 cut(s)	46, 101, 517, 868, 1142
Hpy188I	TCNGA	5 cut(s)	504, 602, 952, 1084, 1204
Hpy188III	TCNNGA	6 cut(s)	64, 353, 362, 395, 571, 1169
Hpy8I	GTNNAC	5 cut(s)	46, 101, 517, 868, 1142
Hpy99I	CGWCG	1 cut(s)	723
HpyAV	CCTTC	3 cut(s)	17, 260, 670
HpyCH4III	ACNGT	3 cut(s)	71, 536, 1237
HpyCH4IV	ACGT	2 cut(s)	721, 969
HpyF10VI	GCNNNNNNNGC	5 cut(s)	514, 635, 701, 1172, 1238
HpyF3I	CTNAG	5 cut(s)	503, 648, 1011, 1167, 1223
HpySE526I	ACGT	2 cut(s)	721, 969
Hsp92I	GRCGYC	1 cut(s)	75
Hsp92II	CATG	6 cut(s)	120, 365, 566, 788, 1321, 1327
HspAI	GCGC	2 cut(s)	75, 1095
KasI	GGCGCC	1 cut(s)	74
Ksp22I	TGATCA	2 cut(s)	751, 763
KspAI	GTTAAC	1 cut(s)	868
LmnI	GCTCC	2 cut(s)	878, 1051
Lsp1109I	GCAGC	2 cut(s)	641, 985
MaeI	CTAG	6 cut(s)	318, 324, 453, 689, 1088, 1092
MaeII	ACGT	2 cut(s)	721, 969
MaeIII	GTNAC	5 cut(s)	313, 419, 463, 965, 1159
MboII	GAAGA	9 cut(s)	350, 488, 724, 767, 827, 881, 923, 994, 1040
MflI	RGATCY	4 cut(s)	139, 355, 789, 1066
MhlI	GDGCHC	2 cut(s)	342, 519
MluCI	AATT	6 cut(s)	105, 180, 374, 917, 1206, 1247
Mly113I	GGCGCC	1 cut(s)	75
MlyI	GAGTC	1 cut(s)	1202
MmeI	TCCRAC	2 cut(s)	755, 983
MroXI	GAANNNNTTC	1 cut(s)	1285
MseI	TTAA	8 cut(s)	108, 161, 243, 483, 531, 867, 1110, 1209
MslI	CAYNNNNRTG	1 cut(s)	1322
MspA1I	CMGCKG	2 cut(s)	512, 632
MspI	CCGG	4 cut(s)	57, 144, 490, 546
MspR9I	CCNGG	6 cut(s)	96, 144, 286, 521, 546, 1025
Mva1269I	GAATGC	1 cut(s)	371
MvaI	CCWGG	4 cut(s)	96, 286, 521, 1025
MwoI	GCNNNNNNNGC	5 cut(s)	514, 635, 701, 1172, 1238
NarI	GGCGCC	1 cut(s)	75
NciI	CCSGG	2 cut(s)	144, 546
NheI	GCTAGC	1 cut(s)	1091
NlaIII	CATG	6 cut(s)	120, 365, 566, 788, 1321, 1327
NlaIV	GGNNCC	3 cut(s)	30, 76, 93
NmuCI	GTSAC	2 cut(s)	313, 965
NspI	RCATGY	1 cut(s)	1327
PagI	TCATGA	1 cut(s)	361
PciI	ACATGT	1 cut(s)	1323
PctI	GAATGC	1 cut(s)	371
PdmI	GAANNNNTTC	1 cut(s)	1285
PfeI	GAWTC	2 cut(s)	715, 1124
PfoI	TCCNGGA	1 cut(s)	544
PinAI	ACCGGT	1 cut(s)	56
PkrI	GCNGC	3 cut(s)	631, 858, 975
PleI	GAGTC	1 cut(s)	1201
PluTI	GGCGCC	1 cut(s)	78
PpsI	GAGTC	1 cut(s)	1201
PpuMI	RGGWCCY	1 cut(s)	1021
PscI	ACATGT	1 cut(s)	1323
Psp124BI	GAGCTC	1 cut(s)	342
Psp5II	RGGWCCY	1 cut(s)	1021
Psp6I	CCWGG	4 cut(s)	94, 284, 519, 1023
PspGI	CCWGG	4 cut(s)	94, 284, 519, 1023
PspN4I	GGNNCC	3 cut(s)	30, 76, 93
PspPI	GGNCC	3 cut(s)	92, 598, 1021
PspPPI	RGGWCCY	1 cut(s)	1021
PsuI	RGATCY	4 cut(s)	139, 355, 789, 1066
PvuII	CAGCTG	2 cut(s)	512, 632
RsaI	GTAC	3 cut(s)	122, 329, 1132
RsaNI	GTAC	3 cut(s)	121, 328, 1131
RseI	CAYNNNNRTG	1 cut(s)	1322
SacI	GAGCTC	1 cut(s)	342
SaqAI	TTAA	8 cut(s)	108, 161, 243, 483, 531, 867, 1110, 1209
SatI	GCNGC	3 cut(s)	630, 857, 974
Sau96I	GGNCC	3 cut(s)	92, 598, 1021
ScaI	AGTACT	1 cut(s)	1132
SchI	GAGTC	1 cut(s)	1202
ScrFI	CCNGG	6 cut(s)	96, 144, 286, 521, 546, 1025
SduI	GDGCHC	2 cut(s)	342, 519
SfcI	CTRYAG	2 cut(s)	343, 406
SfoI	GGCGCC	1 cut(s)	76
SinI	GGWCC	2 cut(s)	598, 1021
SmiMI	CAYNNNNRTG	1 cut(s)	1322
SmlI	CTYRAG	3 cut(s)	62, 395, 1268
SmoI	CTYRAG	3 cut(s)	62, 395, 1268
SpeI	ACTAGT	1 cut(s)	688
Sse9I	AATT	6 cut(s)	105, 180, 374, 917, 1206, 1247
SsiI	CCGC	1 cut(s)	856
SspDI	GGCGCC	1 cut(s)	74
SspI	AATATT	1 cut(s)	947
SspMI	CTAG	6 cut(s)	318, 324, 453, 689, 1088, 1092
SstI	GAGCTC	1 cut(s)	342
StyD4I	CCNGG	6 cut(s)	94, 142, 284, 519, 544, 1023
StyI	CCWWGG	1 cut(s)	1216
TaaI	ACNGT	3 cut(s)	71, 536, 1237
TaiI	ACGT	2 cut(s)	724, 972
TaqI	TCGA	4 cut(s)	431, 718, 892, 1303
TasI	AATT	6 cut(s)	105, 180, 374, 917, 1206, 1247
TatI	WGTACW	1 cut(s)	1130
TauI	GCSGC	1 cut(s)	859
TfiI	GAWTC	2 cut(s)	715, 1124
Tru1I	TTAA	8 cut(s)	108, 161, 243, 483, 531, 867, 1110, 1209
Tru9I	TTAA	8 cut(s)	108, 161, 243, 483, 531, 867, 1110, 1209
TscAI	CASTG	2 cut(s)	541, 1248
TseFI	GTSAC	2 cut(s)	313, 965
TseI	GCWGC	2 cut(s)	629, 973
Tsp45I	GTSAC	2 cut(s)	313, 965
TspDTI	ATGAA	4 cut(s)	350, 378, 699, 828
TspGWI	ACGGA	1 cut(s)	1079
TspRI	CASTG	2 cut(s)	541, 1248
VneI	GTGCAC	1 cut(s)	515
VpaK11BI	GGWCC	2 cut(s)	598, 1021
XapI	RAATTY	3 cut(s)	374, 917, 1247
XceI	RCATGY	1 cut(s)	1327
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1240
XmnI	GAANNNNTTC	1 cut(s)	1285
XspI	CTAG	6 cut(s)	318, 324, 453, 689, 1088, 1092
ZrmI	AGTACT	1 cut(s)	1132

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.