Rw2G019850

Sulfate transporter

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
Physical Location & Seq
Forward (+)
26870661 .. 26873945
3285 bp
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UTR
Exon/CDS
Intron
Rw2G019850.1

Sequence Viewer

Length: 1566 bp
ATGGGGACTTCAAGAGAGATAGCAATTGGACCTGTAGCTGTGGTTTCACTGCTCCTGCCCTCAATGCTTCAGAAATTACAAGATCCTGGTGCTGATCCAATTGCTTACACCAAGCTTGTTTTGACTGCCACTTTCTTCACGGGTATCTTTCAAGCTGCCTTCGGGATCTTCAGATTGGGATTTCTTGTGGATTTTCTTTCCCATGCTGCAATCATAGGGTTCGTGGCAGGAGCAGCCATTATAATTGGCCTTCAACAACTGAAAGGATTACTTGGAATCACTCACTTTCCAAACAGTACTGATGTTATCTCTGTCATGGAAGCTGTTTGGTCCTCATTTCATCATCCTTGGAATCCTCATAATTTTATGCTTGGGTGCTCATTCCTGTGCTTCATCCTAATCTCAAGATTTGTGGGAAGAAAGAACAGGAAACTTTTCTGGTTGCCAGCCATGGCTCCTCTCCTATCTGTTATTCTGTCAACTCTTATTGTTTATTTCACGAGGGCAGATAAGCATGGGATTAAGATTGTAAAACATATCAAAGAGGGCTTGAATCCTAGCTCAGTTCATCTATTACAGCTCAATAGCCCCTATATTGGAGATGTGGCTAAAGTTGGACTCATAGTCGCACTTGTTGCACTCACGGAAGCAATTGCGGTTGGAAAATCCTTTTCATCCATAAAAGGGTACCATATCAATGGGAACAAAGAAATGATGTCAATGGGTTTCATGAACATAGTTGGATCTCTTACTTCTTGCTATGTTGCAACTGGTTCATTCTCACGTACTGCCGTAAACTTCAGTGCCGGTTGTGAAACTCCGGTGTCAAACATTGTCATGGCCATTACGGTGATCATATCACTGCAATTTTTGACAAGGCTCTTGTATTTCACTCCAACAGCAATCCTTGCTTCAATAATTCTGTCTGCTCTTCCTGGACTGATCAATGTCAATGAAATCTACAATATCTGGAAGGTGGATAAGCTTGACTTCCTAGCTTGTATAGGAGCCTTCTTTGGAGTGCTGTTTGCATCAGTGGAGATAGGCCTTCTAGTCGCGGTAGCAATCTCATTCACAAAGATAATTCTCATCTCGATTCGACCTGGGACAGAAACTCTTGGAAAACTTCCTGGAATTGATATGTTTTGTGACACTGAACAATATCCTATGGCTGTCACAGTTCCTGGGATCATGATAGTTCGTGTCAAGTCTGCCTTGTTTTGTTTTGCAAATGCCAACTTCGTTAGAGAAAGAATTGTGAGGTGGATAACTGCAAACAAAGCAAAAGGCCTGAAAGGAAATAACACCAAAGATGCCATTCAAATAGTCATTCTTGACATGTCTAATTTGATCAACATTGATACATCTGGAATAGCTACCCTAGATGACCTGCAGAGGAATTTGTTATCAGAAGGAATTGAGTTAGCAATTGCAAACCCTCGGTGGCAAGTGATTCACAAACTAAAGCTCACCAACTTTGTGGGAAAAATCGGAGGAAGGGTTTTTGTGACTGTTGCAGAAGCTGTGGCTGCAACTTTCTCTGGAAAAATTGCTACCACTTGTTAA

Protein Analysis

521

Amino Acids

56.39

Weight (kDa)

9.36

Isoelectric Point (pI)

28.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sulfate_transp PF00916 1 - 335 3.4e-113 Sulfate permease family
STAS PF01740 388 - 508 9.3e-23 STAS domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015890)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10180
fragaria_vesca FvH4_1g21480
malus_domestica MD01G1024600.v1.1
prunus_persica Prupe.6G180000_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0115361
rosa_laevigata RLG00000018179
rosa_multiflora Rmu_sc0001897.1_g000007
rosa_roxburghii Rroxscaffold_2G00130850
rosa_rugosa Rorug02G0195700 Rorug02G0195800
rosa_samantha Rh2AG254200 Rh2BG264400 Rh2CG258900 Rh2DG262300
rosa_wichuraiana Rw2G019850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 242
Acc36I ACCTGC 1 cut(s) 1398
Acc65I GGTACC 1 cut(s) 687
AccB1I GGYRCC 1 cut(s) 687
AccII CGCG 1 cut(s) 1058
AciI CCGC 2 cut(s) 656, 1058
AclWI GGATC 5 cut(s) 77, 89, 173, 751, 1196
AcoI YGGCCR 1 cut(s) 840
AcsI RAATTY 1 cut(s) 1399
AcuI CTGAAG 3 cut(s) 53, 154, 784
AfaI GTAC 3 cut(s) 298, 689, 787
AfiI CCNNNNNNNGG 2 cut(s) 596, 684
AflIII ACRYGT 1 cut(s) 1338
AgsI TTSAA 6 cut(s) 12, 152, 254, 553, 915, 1322
AhdI GACNNNNNGTC 1 cut(s) 623
AjnI CCWGG 5 cut(s) 85, 934, 1102, 1129, 1183
Alw21I GWGCWC 1 cut(s) 380
AlwI GGATC 5 cut(s) 77, 89, 173, 751, 1196
AlwNI CAGNNNCTG 2 cut(s) 1184, 1523
AoxI GGCC 4 cut(s) 247, 840, 1045, 1288
ApeKI GCWGC 4 cut(s) 155, 206, 233, 1529
ApoI RAATTY 1 cut(s) 1399
Asp700I GAANNNNTTC 1 cut(s) 434
Asp718I GGTACC 1 cut(s) 687
AspS9I GGNCC 2 cut(s) 29, 330
AsuHPI GGTGA 2 cut(s) 862, 1462
AvaII GGWCC 2 cut(s) 29, 330
BalI TGGCCA 1 cut(s) 842
BanI GGYRCC 1 cut(s) 687
BauI CACGAG 1 cut(s) 499
Bbv12I GWGCWC 1 cut(s) 380
BbvI GCAGC 4 cut(s) 142, 193, 245, 1516
BceAI ACGGC 1 cut(s) 776
BciT130I CCWGG 5 cut(s) 87, 936, 1104, 1131, 1185
BclI TGATCA 3 cut(s) 852, 942, 1350
BfaI CTAG 4 cut(s) 558, 995, 1052, 1382
BfmI CTRYAG 2 cut(s) 33, 1391
BfuAI ACCTGC 1 cut(s) 1398
BisI GCNGC 4 cut(s) 156, 207, 234, 1530
BlsI GCNGC 4 cut(s) 157, 208, 235, 1531
BmcAI AGTACT 1 cut(s) 298
Bme1390I CCNGG 5 cut(s) 87, 936, 1104, 1131, 1185
Bme18I GGWCC 2 cut(s) 29, 330
BmeRI GACNNNNNGTC 1 cut(s) 623
BmgT120I GGNCC 2 cut(s) 29, 330
BmiI GGNNCC 3 cut(s) 456, 689, 1009
BmrFI CCNGG 5 cut(s) 87, 936, 1104, 1131, 1185
BmsI GCATC 2 cut(s) 1040, 1303
BpuEI CTTGAG 1 cut(s) 388
BsaAI YACGTR 1 cut(s) 785
BsaJI CCNNGG 5 cut(s) 347, 450, 1103, 1184, 1439
BsaWI WCCGGW 1 cut(s) 820
BsaXI ACNNNNNCTCC 2 cut(s) 1485, 1515
Bsc4I CCNNNNNNNGG 2 cut(s) 596, 684
Bse118I RCCGGY 1 cut(s) 806
Bse1I ACTGG 1 cut(s) 775
BseBI CCWGG 5 cut(s) 87, 936, 1104, 1131, 1185
BseDI CCNNGG 5 cut(s) 347, 450, 1103, 1184, 1439
BseGI GGATG 3 cut(s) 343, 393, 674
BseLI CCNNNNNNNGG 2 cut(s) 596, 684
BseMII CTCAG 1 cut(s) 576
BseNI ACTGG 1 cut(s) 775
BseRI GAGGAG 1 cut(s) 447
BseXI GCAGC 4 cut(s) 142, 193, 245, 1516
Bsh1236I CGCG 1 cut(s) 1058
BshFI GGCC 4 cut(s) 249, 842, 1047, 1290
BshNI GGYRCC 1 cut(s) 687
BsiHKAI GWGCWC 1 cut(s) 380
BsiSI CCGG 2 cut(s) 807, 821
BslFI GGGAC 2 cut(s) 19, 1120
BslI CCNNNNNNNGG 2 cut(s) 596, 684
BsmFI GGGAC 2 cut(s) 19, 1120
BsnI GGCC 4 cut(s) 249, 842, 1047, 1290
Bsp1286I GDGCHC 1 cut(s) 380
Bsp143I GATC 8 cut(s) 82, 94, 165, 743, 852, 942, 1188, 1350
Bsp19I CCATGG 1 cut(s) 450
BspACI CCGC 2 cut(s) 656, 1058
BspANI GGCC 4 cut(s) 249, 842, 1047, 1290
BspCNI CTCAG 1 cut(s) 575
BspFNI CGCG 1 cut(s) 1058
BspHI TCATGA 2 cut(s) 729, 1191
BspLI GGNNCC 3 cut(s) 456, 689, 1009
BspMAI CTGCAG 1 cut(s) 1395
BspMI ACCTGC 1 cut(s) 1398
BspPI GGATC 5 cut(s) 77, 89, 173, 751, 1196
BspQI GCTCTTC 1 cut(s) 936
BspT107I GGYRCC 1 cut(s) 687
BsrFI RCCGGY 1 cut(s) 806
BsrI ACTGG 1 cut(s) 775
BssAI RCCGGY 1 cut(s) 806
BssECI CCNNGG 5 cut(s) 347, 450, 1103, 1184, 1439
BssMI GATC 8 cut(s) 82, 94, 165, 743, 852, 942, 1188, 1350
BssSI CACGAG 1 cut(s) 499
BssT1I CCWWGG 2 cut(s) 347, 450
Bst2BI CACGAG 1 cut(s) 499
Bst2UI CCWGG 5 cut(s) 87, 936, 1104, 1131, 1185
Bst4CI ACNGT 4 cut(s) 296, 850, 1180, 1513
Bst6I CTCTTC 1 cut(s) 936
BstAPI GCANNNNNTGC 2 cut(s) 635, 908
BstBAI YACGTR 1 cut(s) 785
BstC8I GCNNGC 1 cut(s) 447
BstDEI CTNAG 1 cut(s) 562
BstDSI CCRYGG 1 cut(s) 450
BstF5I GGATG 3 cut(s) 343, 393, 674
BstFNI CGCG 1 cut(s) 1058
BstKTI GATC 8 cut(s) 85, 97, 168, 746, 855, 945, 1191, 1353
BstMBI GATC 8 cut(s) 82, 94, 165, 743, 852, 942, 1188, 1350
BstMWI GCNNNNNNNGC 6 cut(s) 64, 233, 635, 908, 1280, 1529
BstNI CCWGG 5 cut(s) 87, 936, 1104, 1131, 1185
BstNSI RCATGY 1 cut(s) 1342
BstSCI CCNGG 5 cut(s) 85, 934, 1102, 1129, 1183
BstSFI CTRYAG 2 cut(s) 33, 1391
BstUI CGCG 1 cut(s) 1058
BstV1I GCAGC 4 cut(s) 142, 193, 245, 1516
BstX2I RGATCY 3 cut(s) 82, 165, 743
BstXI CCANNNNNNTGG 2 cut(s) 698, 1480
BstYI RGATCY 3 cut(s) 82, 165, 743
BsuRI GGCC 4 cut(s) 249, 842, 1047, 1290
BtgI CCRYGG 1 cut(s) 450
BtsCI GGATG 3 cut(s) 343, 393, 674
BtsI GCAGTG 2 cut(s) 47, 860
BtsIMutI CAGTG 5 cut(s) 47, 808, 860, 1041, 1152
BveI ACCTGC 1 cut(s) 1398
Cac8I GCNNGC 1 cut(s) 447
CaiI CAGNNNCTG 2 cut(s) 1184, 1523
CciI TCATGA 2 cut(s) 729, 1191
Cfr10I RCCGGY 1 cut(s) 806
Cfr13I GGNCC 2 cut(s) 29, 330
Csp6I GTAC 3 cut(s) 297, 688, 786
CspCI CAANNNNNGTGG 2 cut(s) 393, 428
CviAII CATG 8 cut(s) 203, 316, 451, 515, 730, 838, 1192, 1339
CviQI GTAC 3 cut(s) 297, 688, 786
DdeI CTNAG 1 cut(s) 562
DpnI GATC 8 cut(s) 84, 96, 167, 745, 854, 944, 1190, 1352
DpnII GATC 8 cut(s) 82, 94, 165, 743, 852, 942, 1188, 1350
DriI GACNNNNNGTC 1 cut(s) 623
EaeI YGGCCR 1 cut(s) 840
Eam1104I CTCTTC 1 cut(s) 936
Eam1105I GACNNNNNGTC 1 cut(s) 623
EarI CTCTTC 1 cut(s) 936
Eco130I CCWWGG 2 cut(s) 347, 450
Eco147I AGGCCT 2 cut(s) 1047, 1290
Eco47I GGWCC 2 cut(s) 29, 330
Eco57I CTGAAG 3 cut(s) 53, 154, 784
EcoRII CCWGG 5 cut(s) 85, 934, 1102, 1129, 1183
EcoT14I CCWWGG 2 cut(s) 347, 450
ErhI CCWWGG 2 cut(s) 347, 450
FaeI CATG 8 cut(s) 206, 319, 454, 518, 733, 841, 1195, 1342
FalI AAGNNNNNCTT 6 cut(s) 255, 287, 974, 1006, 1199, 1231
FaqI GGGAC 2 cut(s) 19, 1120
FatI CATG 8 cut(s) 202, 315, 450, 514, 729, 837, 1191, 1338
FbaI TGATCA 3 cut(s) 852, 942, 1350
Fnu4HI GCNGC 4 cut(s) 156, 207, 234, 1530
FokI GGATG 3 cut(s) 330, 380, 661
Fsp4HI GCNGC 4 cut(s) 156, 207, 234, 1530
FspBI CTAG 4 cut(s) 558, 995, 1052, 1382
GluI GCNGC 4 cut(s) 156, 207, 234, 1530
HaeIII GGCC 4 cut(s) 249, 842, 1047, 1290
HapII CCGG 2 cut(s) 807, 821
Hin1II CATG 8 cut(s) 206, 319, 454, 518, 733, 841, 1195, 1342
HincII GTYRAC 1 cut(s) 480
HindII GTYRAC 1 cut(s) 480
HindIII AAGCTT 2 cut(s) 113, 983
HinfI GANTC 6 cut(s) 276, 352, 553, 618, 1096, 1453
HpaII CCGG 2 cut(s) 807, 821
HphI GGTGA 2 cut(s) 862, 1462
Hpy166II GTNNAC 2 cut(s) 480, 796
Hpy188I TCNGA 4 cut(s) 72, 173, 1411, 1493
Hpy8I GTNNAC 2 cut(s) 480, 796
HpyAV CCTTC 7 cut(s) 169, 260, 967, 1021, 1058, 1406, 1491
HpyCH4III ACNGT 4 cut(s) 296, 850, 1180, 1513
HpyCH4IV ACGT 1 cut(s) 784
HpyF10VI GCNNNNNNNGC 6 cut(s) 64, 233, 635, 908, 1280, 1529
HpyF3I CTNAG 1 cut(s) 562
HpySE526I ACGT 1 cut(s) 784
Hsp92II CATG 8 cut(s) 206, 319, 454, 518, 733, 841, 1195, 1342
KpnI GGTACC 1 cut(s) 691
Ksp22I TGATCA 3 cut(s) 852, 942, 1350
Kzo9I GATC 8 cut(s) 82, 94, 165, 743, 852, 942, 1188, 1350
LguI GCTCTTC 1 cut(s) 936
LmnI GCTCC 4 cut(s) 57, 230, 460, 1007
Lsp1109I GCAGC 4 cut(s) 142, 193, 245, 1516
LweI GCATC 2 cut(s) 1040, 1303
MaeI CTAG 4 cut(s) 558, 995, 1052, 1382
MaeII ACGT 1 cut(s) 784
MaeIII GTNAC 3 cut(s) 1148, 1174, 1507
MalI GATC 8 cut(s) 84, 96, 167, 745, 854, 944, 1190, 1352
MboI GATC 8 cut(s) 82, 94, 165, 743, 852, 942, 1188, 1350
MboII GAAGA 4 cut(s) 127, 160, 429, 923
MfeI CAATTG 4 cut(s) 24, 99, 651, 1428
MflI RGATCY 3 cut(s) 82, 165, 743
MhlI GDGCHC 1 cut(s) 380
MlsI TGGCCA 1 cut(s) 842
MluNI TGGCCA 1 cut(s) 842
MlyI GAGTC 1 cut(s) 612
MmeI TCCRAC 4 cut(s) 595, 640, 721, 920
Mox20I TGGCCA 1 cut(s) 842
MroXI GAANNNNTTC 1 cut(s) 434
MscI TGGCCA 1 cut(s) 842
MseI TTAA 2 cut(s) 522, 1564
MslI CAYNNNNRTG 4 cut(s) 385, 696, 836, 848
Msp20I TGGCCA 1 cut(s) 842
MspI CCGG 2 cut(s) 807, 821
MspR9I CCNGG 5 cut(s) 87, 936, 1104, 1131, 1185
MunI CAATTG 4 cut(s) 24, 99, 651, 1428
MvaI CCWGG 5 cut(s) 87, 936, 1104, 1131, 1185
MvnI CGCG 1 cut(s) 1058
MwoI GCNNNNNNNGC 6 cut(s) 64, 233, 635, 908, 1280, 1529
NcoI CCATGG 1 cut(s) 450
NdeII GATC 8 cut(s) 82, 94, 165, 743, 852, 942, 1188, 1350
NlaIII CATG 8 cut(s) 206, 319, 454, 518, 733, 841, 1195, 1342
NlaIV GGNNCC 3 cut(s) 456, 689, 1009
NmuCI GTSAC 3 cut(s) 1148, 1174, 1507
NspI RCATGY 1 cut(s) 1342
PagI TCATGA 2 cut(s) 729, 1191
PceI AGGCCT 2 cut(s) 1047, 1290
PciI ACATGT 1 cut(s) 1338
PciSI GCTCTTC 1 cut(s) 936
PdmI GAANNNNTTC 1 cut(s) 434
PfeI GAWTC 5 cut(s) 276, 352, 553, 1096, 1453
PfoI TCCNGGA 2 cut(s) 934, 1129
PkrI GCNGC 4 cut(s) 157, 208, 235, 1531
PleI GAGTC 1 cut(s) 612
PpsI GAGTC 1 cut(s) 612
Ppu21I YACGTR 1 cut(s) 785
PscI ACATGT 1 cut(s) 1338
PsiI TTATAA 1 cut(s) 242
Psp6I CCWGG 5 cut(s) 85, 934, 1102, 1129, 1183
PspGI CCWGG 5 cut(s) 85, 934, 1102, 1129, 1183
PspN4I GGNNCC 3 cut(s) 456, 689, 1009
PspPI GGNCC 2 cut(s) 29, 330
PstI CTGCAG 1 cut(s) 1395
PstNI CAGNNNCTG 2 cut(s) 1184, 1523
PsuI RGATCY 3 cut(s) 82, 165, 743
RsaI GTAC 3 cut(s) 298, 689, 787
RsaNI GTAC 3 cut(s) 297, 688, 786
RseI CAYNNNNRTG 4 cut(s) 385, 696, 836, 848
SapI GCTCTTC 1 cut(s) 936
SaqAI TTAA 2 cut(s) 522, 1564
SatI GCNGC 4 cut(s) 156, 207, 234, 1530
Sau3AI GATC 8 cut(s) 82, 94, 165, 743, 852, 942, 1188, 1350
Sau96I GGNCC 2 cut(s) 29, 330
ScaI AGTACT 1 cut(s) 298
SchI GAGTC 1 cut(s) 612
ScrFI CCNGG 5 cut(s) 87, 936, 1104, 1131, 1185
SduI GDGCHC 1 cut(s) 380
SfaNI GCATC 2 cut(s) 1040, 1303
SfcI CTRYAG 2 cut(s) 33, 1391
SinI GGWCC 2 cut(s) 29, 330
SmiMI CAYNNNNRTG 4 cut(s) 385, 696, 836, 848
SmlI CTYRAG 1 cut(s) 403
SmoI CTYRAG 1 cut(s) 403
SseBI AGGCCT 2 cut(s) 1047, 1290
SsiI CCGC 2 cut(s) 656, 1058
SspMI CTAG 4 cut(s) 558, 995, 1052, 1382
StuI AGGCCT 2 cut(s) 1047, 1290
StyD4I CCNGG 5 cut(s) 85, 934, 1102, 1129, 1183
StyI CCWWGG 2 cut(s) 347, 450
TaaI ACNGT 4 cut(s) 296, 850, 1180, 1513
TaiI ACGT 1 cut(s) 787
TaqI TCGA 2 cut(s) 1094, 1099
TatI WGTACW 1 cut(s) 296
TfiI GAWTC 5 cut(s) 276, 352, 553, 1096, 1453
Tru1I TTAA 2 cut(s) 522, 1564
Tru9I TTAA 2 cut(s) 522, 1564
TscAI CASTG 5 cut(s) 54, 808, 867, 1041, 1159
TseFI GTSAC 3 cut(s) 1148, 1174, 1507
TseI GCWGC 4 cut(s) 155, 206, 233, 1529
Tsp45I GTSAC 3 cut(s) 1148, 1174, 1507
TspDTI ATGAA 8 cut(s) 329, 382, 557, 663, 718, 746, 765, 969
TspGWI ACGGA 1 cut(s) 659
TspRI CASTG 5 cut(s) 54, 808, 867, 1041, 1159
VpaK11BI GGWCC 2 cut(s) 29, 330
XapI RAATTY 1 cut(s) 1399
XceI RCATGY 1 cut(s) 1342
XmnI GAANNNNTTC 1 cut(s) 434
XspI CTAG 4 cut(s) 558, 995, 1052, 1382
ZrmI AGTACT 1 cut(s) 298
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.