Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr3

Orthogroup ID

OG0022690

Physical Location & Seq

Genomic Coordinates Forward (+)

4485344 .. 4489627

Gene Structure 4284 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw3G005420.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1545 bp

ATGATCTACTTCCCTTCCCTTTCTTTTTGGACTGCTTCACCCACTTCAACAGGTAATGCTTATTATTTGGACAACTTGAAGACCAGTGGTCAGCATAAGTTCCACCATAAAAACATTAATGTGATCACGAATCTCGCAAACTTGGTTCTCAACTTGCATAAAATCCAAAATCGTCAAACTAGCTTCTTGTTTTTCTTCTTCTTCTTCTGTTTGGCACTTCGCCTGTTGGGCTCTTGTCATCCTCGTCGATTTCTTGTTTCACCGGTTGGGCCAGATCAGGGCTCCGGCTCTCCTCGTCTACAACAATACCCTGCGTCTGTTTCTGCTTCGAGTTTTGAAATTGGATTTTGGTTTCGAGTGGGGATCAAATTTCAGAACGCTGCACTCAAGAAGATGGAAATGCACGCATTAAACGTTTTGACCCGAGTACATCACTTGAATCTGATTCTGGATAATCGTTGCAACAAAATTTTCTTGCATATGGAAGAGGTGGGCAAGTTGTACCACAATCTGAAGCTCGGGATGATAACCAAAGAGCAAGAAAATGAACTTTTAAACTTTCCATTATTCATTCCATTGTTGCCTCCCTTGGCTTCAGCAAACCTTAAGCAGTATTATGCTGTTTGTTTTTCTCTTATTGCGGGAATCATCCTTTTTGGAGTTTTCCTAGCACCCGCTGCAAATGCACTATATGAAGATATGCTTGAGCGGATCAGCGGTTTGCAAAAACTTAACAGTGAAGAAGGTGCTGAGTACTTAGTGGAGTCAACCAATCCCTCCACATGCAAGAACAAGATCAATGCCCATGGCAGTGGCTGTGCTTCCATATTCTTCGACACAGTGGATTTGAATAATATGCTTCATGGTTGCATTGGTTCTGTTCTTGACATTACCATTACCTATGATAATAGATCTATTATTGCAGCAAGCAGTTCGAACAAATTGTATGTCTGGGATGCTAACTTGGGGAGAGTGTGCTATACTCTCACTGGCCACATGGATAAATTGTATGCTGTAGATGTAAGTTCTCAAAAAGGTTACTGCACCAACACAATAATCTTCCCCAAACACTGCAGTGCTTTCTGCTTCAGCATGGACGGACAGACCATATGCTCTAGTCATGTTGACGGAAATCTTCGGCTGTGGGATATTCAAAAAGGAAAGCTACTCAATGAAGTGGCTGTACACTCAAATGCCGTCACATCTATATCTTTGCCACAGAGTGGCAACATGGTATTGACCGGTGGGAGGGACAATGTGCATCACCTTTTCGATATGAGATTCCCAGGAGTTTCTGGCACATTGAGAGCCACCGGAAACAGAGTAGCATCTAATTGGAGCCTATCCTGTATCAGTCCAGATGACAATTATGTTCCTGCTGGATCTGCCGACGGTGCTGTGTATATTTGGTCTATAGCCAAAGATGTGGAAGTCTTCTCTGGGCTTTGCAATTCTTCAAACGCTCTTCTGCTTCAGGTGTTATGCTCTGCTTGGAGAAATGGACAAATGGTAATCCCAATATTGATGACTGGGGTACTTGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000045 GO:0000421 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005776 GO:0006508 GO:0006511 GO:0006807 GO:0006810 GO:0006897 GO:0006907 GO:0006909 GO:0006914 GO:0006996 GO:0007033 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010498 GO:0016020 GO:0016043 GO:0016192 GO:0016236 GO:0016740 GO:0019538 GO:0019776 GO:0019941 GO:0022607 GO:0030163 GO:0030587 GO:0031090 GO:0031154 GO:0032502 GO:0032991 GO:0034274 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043632 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0048856 GO:0051179 GO:0051234 GO:0051603 GO:0051703 GO:0051704 GO:0061919 GO:0070925 GO:0071704 GO:0071840 GO:0090382 GO:0090702 GO:0098588 GO:0098657 GO:0098805 GO:0099120 GO:1901564 GO:1901565 GO:1901575 GO:1902494 GO:1905037 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko04136 ko04138 ko04140 ko04621 map04136 map04138 map04140 map04621

Pfam Domains

Protein Families

ATG16 WD40

Protein Analysis

514

Amino Acids

56.89

Weight (kDa)

8.11

Isoelectric Point (pI)

34.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_WDR5	PF25175	280 - 494	6e-19	WDR5 beta-propeller domain
WD40_Prp19	PF24814	295 - 475	9.5e-11	Prp19 WD40 domain
WD40_CDC20-Fz	PF24807	300 - 474	4.3e-13	CDC20/Fizzy WD40 domain
Beta-prop_THOC3	PF25174	337 - 480	2.6e-15	THOC3 beta-propeller domain
Beta-prop_WDR3_2nd	PF25172	347 - 427	8.1e-06	WDR3 second beta-propeller domain
WDR55	PF24796	348 - 474	1.1e-08	WDR55
EIF3I	PF24805	354 - 435	7.6e-08	EIF3I
Beta-prop_WDR3_1st	PF25173	358 - 472	3.8e-12	WDR3 first beta-propeller domain
Beta-prop_WDR36-Utp21_1st	PF25171	358 - 420	7.8e-06	WDR36/Utp21 first beta-propeller
WD40_Gbeta	PF25391	361 - 478	3.2e-07	G protein beta WD-40 repeat protein
WD40_WDHD1_1st	PF24817	362 - 479	7.2e-10	WDHD1 first WD40 domain
Beta-prop_EML_2	PF23414	367 - 485	7.3e-07	Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_TEP1_2nd	PF25047	392 - 479	3.3e-06	TEP-1 second beta-propeller

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0022690)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr3g0455571
rosa_laevigata	RLG00000031052
rosa_rugosa	Rorug03G0008300
rosa_wichuraiana	Rw3G005420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	1223
AccBSI	CCGCTC	1 cut(s)	709
AccI	GTMKAC	1 cut(s)	298
AciI	CCGC	4 cut(s)	641, 675, 709, 717
AclI	AACGTT	1 cut(s)	414
AclWI	GGATC	3 cut(s)	371, 719, 1390
AcoI	YGGCCR	1 cut(s)	991
AcsI	RAATTY	2 cut(s)	368, 468
AcuI	CTGAAG	4 cut(s)	533, 579, 1072, 1457
AdeI	CACNNNGTG	1 cut(s)	1223
AfaI	GTAC	5 cut(s)	429, 503, 755, 1185, 1536
AfiI	CCNNNNNNNGG	3 cut(s)	278, 1223, 1248
AflII	CTTAAG	1 cut(s)	605
AgeI	ACCGGT	2 cut(s)	262, 1241
AgsI	TTSAA	7 cut(s)	48, 79, 338, 439, 850, 1154, 1458
AhdI	GACNNNNNGTC	1 cut(s)	87
AjnI	CCWGG	1 cut(s)	1285
AleI	CACNNNNGTG	1 cut(s)	1074
AluBI	AGCT	3 cut(s)	183, 517, 1165
AluI	AGCT	3 cut(s)	183, 517, 1165
AlwI	GGATC	3 cut(s)	371, 719, 1390
AlwNI	CAGNNNCTG	1 cut(s)	816
Ama87I	CYCGRG	2 cut(s)	423, 518
AoxI	GGCC	2 cut(s)	269, 991
ApeKI	GCWGC	3 cut(s)	380, 677, 923
ApoI	RAATTY	2 cut(s)	368, 468
ArsI	GACNNNNNNTTYG	2 cut(s)	933, 965
AseI	ATTAAT	1 cut(s)	117
AsiGI	ACCGGT	2 cut(s)	262, 1241
AspS9I	GGNCC	1 cut(s)	269
AsuHPI	GGTGA	3 cut(s)	30, 252, 1256
AsuII	TTCGAA	1 cut(s)	935
AvaI	CYCGRG	2 cut(s)	423, 518
BaeI	ACNNNNGTAYC	1 cut(s)	1526
BalI	TGGCCA	1 cut(s)	993
BanII	GRGCYC	2 cut(s)	233, 284
BarI	GAAGNNNNNNTAC	2 cut(s)	1167, 1199
BbsI	GAAGAC	2 cut(s)	86, 1426
BbvI	GCAGC	3 cut(s)	367, 664, 935
BccI	CCATC	1 cut(s)	388
BceAI	ACGGC	1 cut(s)	1181
BcgI	CGANNNNNNTGC	2 cut(s)	915, 949
BciT130I	CCWGG	1 cut(s)	1287
BclI	TGATCA	1 cut(s)	123
BfaI	CTAG	3 cut(s)	180, 668, 1116
BfmI	CTRYAG	3 cut(s)	1014, 1072, 1413
BfrI	CTTAAG	1 cut(s)	605
BglI	GCCNNNNNGGC	1 cut(s)	228
BglII	AGATCT	1 cut(s)	911
BisI	GCNGC	3 cut(s)	381, 678, 924
BlsI	GCNGC	3 cut(s)	382, 679, 925
BmcAI	AGTACT	1 cut(s)	755
Bme1390I	CCNGG	1 cut(s)	1287
BmeRI	GACNNNNNGTC	1 cut(s)	87
BmeT110I	CYCGRG	2 cut(s)	423, 518
BmgT120I	GGNCC	1 cut(s)	269
BmiI	GGNNCC	2 cut(s)	283, 1340
BmrFI	CCNGG	1 cut(s)	1287
BmrI	ACTGGG	1 cut(s)	1539
BmsI	GCATC	3 cut(s)	946, 1270, 1337
BmuI	ACTGGG	1 cut(s)	1539
BpiI	GAAGAC	2 cut(s)	86, 1426
Bpu14I	TTCGAA	1 cut(s)	935
BpuEI	CTTGAG	2 cut(s)	371, 725
BsaJI	CCNNGG	3 cut(s)	588, 805, 1285
BsaWI	WCCGGW	3 cut(s)	262, 1241, 1313
Bsc4I	CCNNNNNNNGG	3 cut(s)	278, 1223, 1248
Bse118I	RCCGGY	2 cut(s)	262, 1241
Bse1I	ACTGG	3 cut(s)	84, 994, 1534
BseBI	CCWGG	1 cut(s)	1287
BseDI	CCNNGG	3 cut(s)	588, 805, 1285
BseGI	GGATG	4 cut(s)	238, 528, 648, 961
BseLI	CCNNNNNNNGG	3 cut(s)	278, 1223, 1248
BseMII	CTCAG	1 cut(s)	741
BseNI	ACTGG	3 cut(s)	84, 994, 1534
BseRI	GAGGAG	1 cut(s)	282
BseXI	GCAGC	3 cut(s)	367, 664, 935
BsgI	GTGCAG	2 cut(s)	366, 1027
BshFI	GGCC	2 cut(s)	271, 993
BshTI	ACCGGT	2 cut(s)	262, 1241
BsiHKCI	CYCGRG	2 cut(s)	423, 518
BsiSI	CCGG	4 cut(s)	263, 285, 1242, 1314
BslFI	GGGAC	1 cut(s)	1265
BslI	CCNNNNNNNGG	3 cut(s)	278, 1223, 1248
BsmFI	GGGAC	1 cut(s)	1265
BsnI	GGCC	2 cut(s)	271, 993
BsoBI	CYCGRG	2 cut(s)	423, 518
Bsp119I	TTCGAA	1 cut(s)	935
Bsp1286I	GDGCHC	2 cut(s)	233, 284
Bsp1407I	TGTACA	1 cut(s)	1183
Bsp143I	GATC	8 cut(s)	3, 123, 274, 363, 711, 795, 911, 1382
Bsp19I	CCATGG	1 cut(s)	805
BspACI	CCGC	4 cut(s)	641, 675, 709, 717
BspANI	GGCC	2 cut(s)	271, 993
BspCNI	CTCAG	1 cut(s)	742
BspLI	GGNNCC	2 cut(s)	283, 1340
BspMAI	CTGCAG	1 cut(s)	1076
BspPI	GGATC	3 cut(s)	371, 719, 1390
BspQI	GCTCTTC	1 cut(s)	1470
BspT104I	TTCGAA	1 cut(s)	935
BspTI	CTTAAG	1 cut(s)	605
BsrBI	CCGCTC	1 cut(s)	709
BsrFI	RCCGGY	2 cut(s)	262, 1241
BsrGI	TGTACA	1 cut(s)	1183
BsrI	ACTGG	3 cut(s)	84, 994, 1534
BssAI	RCCGGY	2 cut(s)	262, 1241
BssECI	CCNNGG	3 cut(s)	588, 805, 1285
BssMI	GATC	8 cut(s)	3, 123, 274, 363, 711, 795, 911, 1382
BssT1I	CCWWGG	2 cut(s)	588, 805
Bst2UI	CCWGG	1 cut(s)	1287
Bst4CI	ACNGT	3 cut(s)	737, 841, 1394
Bst6I	CTCTTC	2 cut(s)	480, 1470
BstAFI	CTTAAG	1 cut(s)	605
BstAPI	GCANNNNNTGC	1 cut(s)	677
BstAUI	TGTACA	1 cut(s)	1183
BstBI	TTCGAA	1 cut(s)	935
BstC8I	GCNNGC	2 cut(s)	405, 928
BstDEI	CTNAG	2 cut(s)	750, 757
BstDSI	CCRYGG	1 cut(s)	805
BstF5I	GGATG	4 cut(s)	238, 528, 648, 961
BstKTI	GATC	8 cut(s)	6, 126, 277, 366, 714, 798, 914, 1385
BstMBI	GATC	8 cut(s)	3, 123, 274, 363, 711, 795, 911, 1382
BstMWI	GCNNNNNNNGC	5 cut(s)	228, 677, 683, 1385, 1394
BstNI	CCWGG	1 cut(s)	1287
BstNSI	RCATGY	1 cut(s)	786
BstSCI	CCNGG	1 cut(s)	1285
BstSFI	CTRYAG	3 cut(s)	1014, 1072, 1413
BstV1I	GCAGC	3 cut(s)	367, 664, 935
BstV2I	GAAGAC	2 cut(s)	86, 1426
BstX2I	RGATCY	2 cut(s)	911, 1382
BstXI	CCANNNNNNTGG	2 cut(s)	812, 1426
BstYI	RGATCY	2 cut(s)	911, 1382
BsuRI	GGCC	2 cut(s)	271, 993
BtgI	CCRYGG	1 cut(s)	805
BtsCI	GGATG	4 cut(s)	238, 528, 648, 961
BtsI	GCAGTG	3 cut(s)	817, 1069, 1081
BtsIMutI	CAGTG	7 cut(s)	91, 742, 817, 846, 987, 1069, 1081
Cac8I	GCNNGC	2 cut(s)	405, 928
CaiI	CAGNNNCTG	1 cut(s)	816
Cfr10I	RCCGGY	2 cut(s)	262, 1241
Cfr13I	GGNCC	1 cut(s)	269
CseI	GACGC	1 cut(s)	303
Csp6I	GTAC	5 cut(s)	428, 502, 754, 1184, 1535
CspAI	ACCGGT	2 cut(s)	262, 1241
CviAII	CATG	7 cut(s)	783, 806, 863, 997, 1093, 1121, 1231
CviQI	GTAC	5 cut(s)	428, 502, 754, 1184, 1535
DdeI	CTNAG	2 cut(s)	750, 757
DpnI	GATC	8 cut(s)	5, 125, 276, 365, 713, 797, 913, 1384
DpnII	GATC	8 cut(s)	3, 123, 274, 363, 711, 795, 911, 1382
DraI	TTTAAA	1 cut(s)	555
DraIII	CACNNNGTG	1 cut(s)	1223
DriI	GACNNNNNGTC	1 cut(s)	87
EaeI	YGGCCR	1 cut(s)	991
Eam1104I	CTCTTC	2 cut(s)	480, 1470
Eam1105I	GACNNNNNGTC	1 cut(s)	87
EarI	CTCTTC	2 cut(s)	480, 1470
Eco130I	CCWWGG	2 cut(s)	588, 805
Eco24I	GRGCYC	2 cut(s)	233, 284
Eco57I	CTGAAG	4 cut(s)	533, 579, 1072, 1457
Eco88I	CYCGRG	2 cut(s)	423, 518
EcoRII	CCWGG	1 cut(s)	1285
EcoT14I	CCWWGG	2 cut(s)	588, 805
EcoT38I	GRGCYC	2 cut(s)	233, 284
ErhI	CCWWGG	2 cut(s)	588, 805
FaeI	CATG	7 cut(s)	786, 809, 866, 1000, 1096, 1124, 1234
FalI	AAGNNNNNCTT	2 cut(s)	687, 719
FaqI	GGGAC	1 cut(s)	1265
FatI	CATG	7 cut(s)	782, 805, 862, 996, 1092, 1120, 1230
FauI	CCCGC	2 cut(s)	634, 682
FauNDI	CATATG	2 cut(s)	480, 1109
FbaI	TGATCA	1 cut(s)	123
FblI	GTMKAC	1 cut(s)	298
Fnu4HI	GCNGC	3 cut(s)	381, 678, 924
FokI	GGATG	4 cut(s)	225, 535, 635, 968
FriOI	GRGCYC	2 cut(s)	233, 284
Fsp4HI	GCNGC	3 cut(s)	381, 678, 924
FspBI	CTAG	3 cut(s)	180, 668, 1116
GluI	GCNGC	3 cut(s)	381, 678, 924
HaeIII	GGCC	2 cut(s)	271, 993
HapII	CCGG	4 cut(s)	263, 285, 1242, 1314
HgaI	GACGC	1 cut(s)	303
Hin1II	CATG	7 cut(s)	786, 809, 866, 1000, 1096, 1124, 1234
HincII	GTYRAC	2 cut(s)	768, 1126
HindII	GTYRAC	2 cut(s)	768, 1126
HinfI	GANTC	6 cut(s)	130, 439, 445, 645, 764, 1281
HpaII	CCGG	4 cut(s)	263, 285, 1242, 1314
HphI	GGTGA	3 cut(s)	30, 252, 1256
Hpy166II	GTNNAC	4 cut(s)	299, 768, 1126, 1186
Hpy188I	TCNGA	3 cut(s)	375, 444, 513
Hpy188III	TCNNGA	6 cut(s)	127, 388, 449, 520, 884, 1358
Hpy8I	GTNNAC	4 cut(s)	299, 768, 1126, 1186
Hpy99I	CGWCG	2 cut(s)	249, 1394
HpyAV	CCTTC	2 cut(s)	24, 737
HpyCH4III	ACNGT	3 cut(s)	737, 841, 1394
HpyCH4IV	ACGT	1 cut(s)	414
HpyF10VI	GCNNNNNNNGC	5 cut(s)	228, 677, 683, 1385, 1394
HpyF3I	CTNAG	2 cut(s)	750, 757
HpySE526I	ACGT	1 cut(s)	414
Hsp92II	CATG	7 cut(s)	786, 809, 866, 1000, 1096, 1124, 1234
Ksp22I	TGATCA	1 cut(s)	123
Kzo9I	GATC	8 cut(s)	3, 123, 274, 363, 711, 795, 911, 1382
LguI	GCTCTTC	1 cut(s)	1470
LmnI	GCTCC	2 cut(s)	287, 1338
Lsp1109I	GCAGC	3 cut(s)	367, 664, 935
LweI	GCATC	3 cut(s)	946, 1270, 1337
MaeI	CTAG	3 cut(s)	180, 668, 1116
MaeII	ACGT	1 cut(s)	414
MaeIII	GTNAC	2 cut(s)	1037, 1198
MalI	GATC	8 cut(s)	5, 125, 276, 365, 713, 797, 913, 1384
MbiI	CCGCTC	1 cut(s)	709
MboI	GATC	8 cut(s)	3, 123, 274, 363, 711, 795, 911, 1382
MflI	RGATCY	2 cut(s)	911, 1382
MhlI	GDGCHC	2 cut(s)	233, 284
MlsI	TGGCCA	1 cut(s)	993
MluCI	AATT	8 cut(s)	339, 368, 468, 941, 1004, 1333, 1366, 1450
MluNI	TGGCCA	1 cut(s)	993
MlyI	GAGTC	1 cut(s)	773
MnlI	CCTC	6 cut(s)	252, 303, 481, 594, 787, 1242
Mox20I	TGGCCA	1 cut(s)	993
MscI	TGGCCA	1 cut(s)	993
MseI	TTAA	5 cut(s)	117, 410, 554, 606, 732
MslI	CAYNNNNRTG	4 cut(s)	119, 810, 1074, 1191
Msp20I	TGGCCA	1 cut(s)	993
MspA1I	CMGCKG	2 cut(s)	677, 717
MspCI	CTTAAG	1 cut(s)	605
MspI	CCGG	4 cut(s)	263, 285, 1242, 1314
MspR9I	CCNGG	1 cut(s)	1287
MvaI	CCWGG	1 cut(s)	1287
MwoI	GCNNNNNNNGC	5 cut(s)	228, 677, 683, 1385, 1394
NcoI	CCATGG	1 cut(s)	805
NdeI	CATATG	2 cut(s)	480, 1109
NdeII	GATC	8 cut(s)	3, 123, 274, 363, 711, 795, 911, 1382
NlaIII	CATG	7 cut(s)	786, 809, 866, 1000, 1096, 1124, 1234
NlaIV	GGNNCC	2 cut(s)	283, 1340
NmuCI	GTSAC	1 cut(s)	1198
NspI	RCATGY	1 cut(s)	786
NspV	TTCGAA	1 cut(s)	935
OliI	CACNNNNGTG	1 cut(s)	1074
PciSI	GCTCTTC	1 cut(s)	1470
PcsI	WCGNNNNNNNCGW	1 cut(s)	411
PfeI	GAWTC	5 cut(s)	130, 439, 445, 645, 1281
PflMI	CCANNNNNTGG	1 cut(s)	1223
PinAI	ACCGGT	2 cut(s)	262, 1241
PkrI	GCNGC	3 cut(s)	382, 679, 925
PleI	GAGTC	1 cut(s)	772
PpsI	GAGTC	1 cut(s)	772
PshBI	ATTAAT	1 cut(s)	117
Psp1406I	AACGTT	1 cut(s)	414
Psp6I	CCWGG	1 cut(s)	1285
PspGI	CCWGG	1 cut(s)	1285
PspN4I	GGNNCC	2 cut(s)	283, 1340
PspPI	GGNCC	1 cut(s)	269
PstI	CTGCAG	1 cut(s)	1076
PstNI	CAGNNNCTG	1 cut(s)	816
PsuI	RGATCY	2 cut(s)	911, 1382
RsaI	GTAC	5 cut(s)	429, 503, 755, 1185, 1536
RsaNI	GTAC	5 cut(s)	428, 502, 754, 1184, 1535
RseI	CAYNNNNRTG	4 cut(s)	119, 810, 1074, 1191
SapI	GCTCTTC	1 cut(s)	1470
SaqAI	TTAA	5 cut(s)	117, 410, 554, 606, 732
SatI	GCNGC	3 cut(s)	381, 678, 924
Sau3AI	GATC	8 cut(s)	3, 123, 274, 363, 711, 795, 911, 1382
Sau96I	GGNCC	1 cut(s)	269
ScaI	AGTACT	1 cut(s)	755
SchI	GAGTC	1 cut(s)	773
ScrFI	CCNGG	1 cut(s)	1287
SduI	GDGCHC	2 cut(s)	233, 284
SfaNI	GCATC	3 cut(s)	946, 1270, 1337
SfcI	CTRYAG	3 cut(s)	1014, 1072, 1413
SfuI	TTCGAA	1 cut(s)	935
SmiMI	CAYNNNNRTG	4 cut(s)	119, 810, 1074, 1191
SmlI	CTYRAG	4 cut(s)	386, 605, 704, 1538
SmoI	CTYRAG	4 cut(s)	386, 605, 704, 1538
Sse9I	AATT	8 cut(s)	339, 368, 468, 941, 1004, 1333, 1366, 1450
SsiI	CCGC	4 cut(s)	641, 675, 709, 717
SspI	AATATT	1 cut(s)	1521
SspMI	CTAG	3 cut(s)	180, 668, 1116
StyD4I	CCNGG	1 cut(s)	1285
StyI	CCWWGG	2 cut(s)	588, 805
TaaI	ACNGT	3 cut(s)	737, 841, 1394
TaiI	ACGT	1 cut(s)	417
TaqI	TCGA	6 cut(s)	247, 329, 355, 834, 935, 1272
TasI	AATT	8 cut(s)	339, 368, 468, 941, 1004, 1333, 1366, 1450
TatI	WGTACW	3 cut(s)	427, 753, 1183
TfiI	GAWTC	5 cut(s)	130, 439, 445, 645, 1281
Tru1I	TTAA	5 cut(s)	117, 410, 554, 606, 732
Tru9I	TTAA	5 cut(s)	117, 410, 554, 606, 732
TscAI	CASTG	7 cut(s)	91, 742, 817, 846, 994, 1076, 1081
TseFI	GTSAC	1 cut(s)	1198
TseI	GCWGC	3 cut(s)	380, 677, 923
Tsp45I	GTSAC	1 cut(s)	1198
TspDTI	ATGAA	5 cut(s)	559, 561, 708, 851, 1188
TspGWI	ACGGA	2 cut(s)	1113, 1143
TspRI	CASTG	7 cut(s)	91, 742, 817, 846, 994, 1076, 1081
Van91I	CCANNNNNTGG	1 cut(s)	1223
Vha464I	CTTAAG	1 cut(s)	605
VspI	ATTAAT	1 cut(s)	117
XapI	RAATTY	2 cut(s)	368, 468
XceI	RCATGY	1 cut(s)	786
XmiI	GTMKAC	1 cut(s)	298
XspI	CTAG	3 cut(s)	180, 668, 1116
ZrmI	AGTACT	1 cut(s)	755

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.