Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr3

Orthogroup ID

OG0014285

Physical Location & Seq

Genomic Coordinates Forward (+)

22861129 .. 22863856

Gene Structure 2728 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw3G019750.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1677 bp

ATGGAAGCTTCATTGCTGAACTCTTTCTCTTCAATGATTAATGCACCAAATAAACTTGCGAGACTGTCAGAAAAGTGGGATTGGTGCTTGTTGAGGAGAAAAAAGAGTAGTTTGGCTGTGTGCCAAGGAGCATCATCAGGTGGAAATGCCAAAAAGATTTGTGGTTTTTCTTCTGCTGCAACTCTAATGGATGCAGGAAGCCTTGTTTTGTCTCTAAATGATCAGAAGGTCCAGAAGAAGAACAAATTTTCAGTCAAGGATTTGGTGCCTTTTGTGGAGATGCATGACGGTATTGGAATTGTAAAGTTTCTTAAAGGAAAAGGGTTCTTCATTACTGGCGGAACCGGGTTTCTAGCAAAAGTTCTTATTGAGAAGATTTTACGGACCGCACCTGATGTGGGGAAGATATATCTCTTGATCAAGGCCAAAAACAAGGAGGCTGCAATGGAAAGACTAAAAAGTGAAATCATAAGCACAGAGCTTTTCAAAGGTCTTAGACAAACTTACGGAAAATCTTATCAAGCCTTCATGTTGAGCAAGCTAGTTCCGGTGGTTGGAAATTTATGTGAATTGGATCTTGGGCTAGGAGACGATATAGCTGCTTTGATTGCTAAAGAAGTTGATGTTGTTATAAATTCTGCAGCTAACACGACATTTCATGAAAGATATGATGTAGCTTTAGATATAAACACAAAAGGACCTTGCCACCTTATGGCCTTTGCAAAGAAGTGCAAGAGACTTGAGCTCTTTCTGCAAATATCAACAGGATTCTATCCACTGGATGTTGAAAATGAAATAAAGTTGGCTATGAACTCCAAGGGAGCTTATGAAGATAATGAGGTAGCTCAAAAGATGAAAGATCTGGGTTTGGAAAGGGCCAGAAAATATGGATGGCAAGATACATATGTGTTCACCAAGGCCATGGGAGAAATGCTGATTGATGATATGAGAGGTGATGTACCAGTAGTCATAATCCGACCTAGTGTCATCGAGAGCACTTGCAAAGAGCCATTTCCTGGATGGATCGAAGGAAATAGGATGATGGATCCAATTGTTTTATACTATGGAAAAGGACAGCTCACAGGTTTTCTAGGAGACCCTGATGTGGTACTTGATGTGGTTCCGGCTGACATGGTTGTTAACGCAACTTTGGCTGCCATTGCAAAGCATGGAATGGCTCAGATACCAGACATCAATGTCTACCAGATTACTTCATCAGTTGTGAACCCATTAGACCTCCAAGATTTGGTTAGACTGCTGTATGAACATTACAACTCCTCACCCTGCATGGACTCGAAAGGCAGGCCAATCAACGTTCCATCAATGAAGCTCTTCAGCTCCATGGAAGATTTCATCGCTCACATTTGGAGAGATGCCACTCAACGAAGCGGGTTGACAGCTTTGGCTTCCTCGAATGGGAAGCTGTCTCAGAAACTTGAGACGATGTGCAGAAAGTCAGTAGAGAAAGCAAAGTACTTGGCTAATATTTATGAGCCTTATACTTTCTATGGTGGAAGGTTTGATAACAGCAACACTGAGAGACTAATGGAGAGCATGTCTGAAGAAGAAAAGATGAAGTTTGGATTTGATGTTGGAAGCTTAGATTGGAAAGAGTATATAAAAAATGTTCATATTCCAGGTCTTAAAAGGCACGTCTTGAAGGGCAGAGGGGTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006163 GO:0006637 GO:0006725 GO:0006732 GO:0006753 GO:0006790 GO:0006793 GO:0006796 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009117 GO:0009150 GO:0009259 GO:0009555 GO:0009653 GO:0009698 GO:0009699 GO:0009987 GO:0010208 GO:0010345 GO:0010584 GO:0010927 GO:0016043 GO:0016491 GO:0016620 GO:0016627 GO:0016628 GO:0016903 GO:0019438 GO:0019637 GO:0019693 GO:0019748 GO:0022607 GO:0030198 GO:0032501 GO:0032502 GO:0032989 GO:0033865 GO:0033875 GO:0034032 GO:0034641 GO:0035336 GO:0035337 GO:0035383 GO:0043062 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043603 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044424 GO:0044464 GO:0044550 GO:0045229 GO:0046483 GO:0048229 GO:0048646 GO:0048856 GO:0048869 GO:0051186 GO:0055086 GO:0055114 GO:0071704 GO:0071840 GO:0072521 GO:0080019 GO:0085029 GO:1901135 GO:1901360 GO:1901362 GO:1901564 GO:1901568 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00073 ko04146 ko04212 map00073 map04146 map04212

Pfam Domains

Protein Families

NAD_binding_4 Sterile

Protein Analysis

558

Amino Acids

62.1

Weight (kDa)

8.76

Isoelectric Point (pI)

35.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Epimerase	PF01370	110 - 389	5.5e-09	NAD dependent epimerase/dehydratase family
NAD_binding_4	PF07993	111 - 383	1e-72	Male sterility protein
Sterile	PF03015	481 - 554	8.7e-18	Male sterility protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0014285)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G11980
fragaria_vesca	FvH4_6g21540 FvH4_6g21540
malus_domestica	MD14G1051100.v1.1
prunus_persica	Prupe.7G084900_v2.0.a1
pyrus_communis	pycom12g04600
rosa_chinensis	RchiOBHm_Chr3g0478781
rosa_laevigata	RLG00000023627
rosa_rugosa	Rorug03G0167900 Rorug03G0168000 Rorug03G0168000 Rorug03G0168100.1
rosa_samantha	Rh3AG219900 Rh3BG251700 Rh3CG248600 Rh3DG244800
rosa_wichuraiana	Rw3G019750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	632
AasI	GACNNNNNNGTC	1 cut(s)	1196
AccB1I	GGYRCC	1 cut(s)	265
AccB7I	CCANNNNNTGG	3 cut(s)	712, 1016, 1246
AccI	GTMKAC	1 cut(s)	1200
AciI	CCGC	3 cut(s)	339, 387, 1389
AclI	AACGTT	1 cut(s)	1314
AclWI	GGATC	4 cut(s)	582, 1031, 1040, 1053
AcsI	RAATTY	3 cut(s)	245, 559, 634
AcuI	CTGAAG	2 cut(s)	1318, 1581
AfaI	GTAC	3 cut(s)	960, 1110, 1475
AfiI	CCNNNNNNNGG	7 cut(s)	398, 554, 712, 1016, 1105, 1246, 1416
AgsI	TTSAA	4 cut(s)	33, 487, 788, 1660
AhdI	GACNNNNNGTC	1 cut(s)	983
AjiI	CACGTC	1 cut(s)	1654
AjnI	CCWGG	2 cut(s)	1015, 1636
AjuI	GAANNNNNNNTTGG	4 cut(s)	561, 593, 1588, 1620
Alw21I	GWGCWC	2 cut(s)	747, 998
Alw26I	GTCTC	8 cut(s)	55, 216, 582, 730, 1089, 1431, 1433, 1534
AlwI	GGATC	4 cut(s)	582, 1031, 1040, 1053
AoxI	GGCC	5 cut(s)	423, 714, 876, 918, 1304
ApeKI	GCWGC	5 cut(s)	176, 440, 599, 641, 1154
ApoI	RAATTY	3 cut(s)	245, 559, 634
ArsI	GACNNNNNNTTYG	2 cut(s)	237, 269
AseI	ATTAAT	1 cut(s)	39
Asp700I	GAANNNNTTC	2 cut(s)	23, 1331
AspS9I	GGNCC	4 cut(s)	229, 384, 698, 876
AsuC2I	CCSGG	1 cut(s)	346
AsuHPI	GGTGA	3 cut(s)	904, 965, 1272
AvaII	GGWCC	3 cut(s)	229, 384, 698
BaeI	ACNNNNGTAYC	2 cut(s)	891, 924
BamHI	GGATCC	1 cut(s)	1045
BanI	GGYRCC	1 cut(s)	265
BanII	GRGCYC	1 cut(s)	747
Bbv12I	GWGCWC	2 cut(s)	747, 998
BbvI	GCAGC	5 cut(s)	163, 427, 586, 653, 1141
BccI	CCATC	4 cut(s)	885, 1014, 1036, 1327
BcgI	CGANNNNNNTGC	2 cut(s)	581, 615
BciT130I	CCWGG	2 cut(s)	1017, 1638
BclI	TGATCA	2 cut(s)	220, 417
BcnI	CCSGG	1 cut(s)	346
BcoDI	GTCTC	8 cut(s)	55, 216, 582, 730, 1089, 1431, 1433, 1534
BfaI	CTAG	5 cut(s)	353, 542, 584, 981, 1091
BfmI	CTRYAG	1 cut(s)	639
BglII	AGATCT	1 cut(s)	859
BisI	GCNGC	5 cut(s)	177, 441, 600, 642, 1155
BlsI	GCNGC	5 cut(s)	178, 442, 601, 643, 1156
BmcAI	AGTACT	1 cut(s)	1475
Bme1390I	CCNGG	3 cut(s)	346, 1017, 1638
Bme18I	GGWCC	3 cut(s)	229, 384, 698
BmeRI	GACNNNNNGTC	1 cut(s)	983
BmgBI	CACGTC	1 cut(s)	1654
BmgT120I	GGNCC	4 cut(s)	229, 384, 698, 876
BmiI	GGNNCC	4 cut(s)	267, 343, 1047, 1122
BmrFI	CCNGG	3 cut(s)	346, 1017, 1638
BmsI	GCATC	4 cut(s)	140, 181, 270, 1363
BpuEI	CTTGAG	2 cut(s)	761, 1457
BpuMI	CCSGG	1 cut(s)	346
BsaI	GGTCTC	1 cut(s)	1089
BsaJI	CCNNGG	5 cut(s)	124, 816, 915, 921, 1341
BsaWI	WCCGGW	1 cut(s)	547
BsaXI	ACNNNNNCTCC	2 cut(s)	1541, 1571
Bsc4I	CCNNNNNNNGG	7 cut(s)	398, 554, 712, 1016, 1105, 1246, 1416
Bse1I	ACTGG	3 cut(s)	340, 783, 962
Bse3DI	GCAATG	3 cut(s)	11, 450, 1158
BseBI	CCWGG	2 cut(s)	1017, 1638
BseDI	CCNNGG	5 cut(s)	124, 816, 915, 921, 1341
BseGI	GGATG	5 cut(s)	196, 787, 896, 1025, 1044
BseLI	CCNNNNNNNGG	7 cut(s)	398, 554, 712, 1016, 1105, 1246, 1416
BseMI	GCAATG	3 cut(s)	11, 450, 1158
BseMII	CTCAG	3 cut(s)	1193, 1442, 1527
BseNI	ACTGG	3 cut(s)	340, 783, 962
BseRI	GAGGAG	2 cut(s)	109, 1267
BseXI	GCAGC	5 cut(s)	163, 427, 586, 653, 1141
BsgI	GTGCAG	1 cut(s)	1468
BshFI	GGCC	5 cut(s)	425, 716, 878, 920, 1306
BshNI	GGYRCC	1 cut(s)	265
BsiHKAI	GWGCWC	2 cut(s)	747, 998
BsiSI	CCGG	3 cut(s)	345, 548, 1124
BslI	CCNNNNNNNGG	7 cut(s)	398, 554, 712, 1016, 1105, 1246, 1416
BsmAI	GTCTC	8 cut(s)	55, 216, 582, 730, 1089, 1431, 1433, 1534
BsmBI	CGTCTC	2 cut(s)	582, 1433
BsnI	GGCC	5 cut(s)	425, 716, 878, 920, 1306
Bso31I	GGTCTC	1 cut(s)	1089
Bsp1286I	GDGCHC	2 cut(s)	747, 998
Bsp143I	GATC	6 cut(s)	220, 417, 574, 859, 1023, 1045
Bsp19I	CCATGG	2 cut(s)	921, 1341
BspACI	CCGC	3 cut(s)	339, 387, 1389
BspANI	GGCC	5 cut(s)	425, 716, 878, 920, 1306
BspCNI	CTCAG	3 cut(s)	1192, 1441, 1528
BspHI	TCATGA	1 cut(s)	658
BspLI	GGNNCC	4 cut(s)	267, 343, 1047, 1122
BspMAI	CTGCAG	1 cut(s)	643
BspPI	GGATC	4 cut(s)	582, 1031, 1040, 1053
BspQI	GCTCTTC	1 cut(s)	1337
BspT107I	GGYRCC	1 cut(s)	265
BspTNI	GGTCTC	1 cut(s)	1089
BsrDI	GCAATG	3 cut(s)	11, 450, 1158
BsrI	ACTGG	3 cut(s)	340, 783, 962
BssECI	CCNNGG	5 cut(s)	124, 816, 915, 921, 1341
BssMI	GATC	6 cut(s)	220, 417, 574, 859, 1023, 1045
BssT1I	CCWWGG	5 cut(s)	124, 816, 915, 921, 1341
Bst2UI	CCWGG	2 cut(s)	1017, 1638
Bst4CI	ACNGT	2 cut(s)	66, 290
Bst6I	CTCTTC	2 cut(s)	34, 1337
BstC8I	GCNNGC	2 cut(s)	539, 1304
BstDEI	CTNAG	5 cut(s)	494, 1179, 1428, 1536, 1600
BstDSI	CCRYGG	2 cut(s)	921, 1341
BstF5I	GGATG	5 cut(s)	196, 787, 896, 1025, 1044
BstKTI	GATC	6 cut(s)	223, 420, 577, 862, 1026, 1048
BstMAI	GTCTC	8 cut(s)	55, 216, 582, 730, 1089, 1431, 1433, 1534
BstMBI	GATC	6 cut(s)	220, 417, 574, 859, 1023, 1045
BstMWI	GCNNNNNNNGC	4 cut(s)	608, 751, 1151, 1160
BstNI	CCWGG	2 cut(s)	1017, 1638
BstNSI	RCATGY	1 cut(s)	1558
BstSCI	CCNGG	3 cut(s)	344, 1015, 1636
BstSFI	CTRYAG	1 cut(s)	639
BstV1I	GCAGC	5 cut(s)	163, 427, 586, 653, 1141
BstX2I	RGATCY	3 cut(s)	574, 859, 1045
BstXI	CCANNNNNNTGG	1 cut(s)	922
BstYI	RGATCY	3 cut(s)	574, 859, 1045
BsuRI	GGCC	5 cut(s)	425, 716, 878, 920, 1306
BtgI	CCRYGG	2 cut(s)	921, 1341
BtgZI	GCGATG	1 cut(s)	1339
BtrI	CACGTC	1 cut(s)	1654
BtsCI	GGATG	5 cut(s)	196, 787, 896, 1025, 1044
BtsIMutI	CAGTG	2 cut(s)	776, 1533
Cac8I	GCNNGC	2 cut(s)	539, 1304
CciI	TCATGA	1 cut(s)	658
Cfr13I	GGNCC	4 cut(s)	229, 384, 698, 876
CpoI	CGGWCCG	1 cut(s)	384
Csp6I	GTAC	3 cut(s)	959, 1109, 1474
CspI	CGGWCCG	1 cut(s)	384
CviAII	CATG	9 cut(s)	284, 529, 659, 922, 1132, 1169, 1288, 1342, 1555
CviQI	GTAC	3 cut(s)	959, 1109, 1474
DdeI	CTNAG	5 cut(s)	494, 1179, 1428, 1536, 1600
DpnI	GATC	6 cut(s)	222, 419, 576, 861, 1025, 1047
DpnII	GATC	6 cut(s)	220, 417, 574, 859, 1023, 1045
DrdI	GACNNNNNNGTC	1 cut(s)	1196
DriI	GACNNNNNGTC	1 cut(s)	983
DseDI	GACNNNNNNGTC	1 cut(s)	1196
Eam1104I	CTCTTC	2 cut(s)	34, 1337
Eam1105I	GACNNNNNGTC	1 cut(s)	983
EarI	CTCTTC	2 cut(s)	34, 1337
EciI	GGCGGA	1 cut(s)	354
Ecl136II	GAGCTC	1 cut(s)	745
Eco130I	CCWWGG	5 cut(s)	124, 816, 915, 921, 1341
Eco24I	GRGCYC	1 cut(s)	747
Eco31I	GGTCTC	1 cut(s)	1089
Eco47I	GGWCC	3 cut(s)	229, 384, 698
Eco53kI	GAGCTC	1 cut(s)	745
Eco57I	CTGAAG	2 cut(s)	1318, 1581
EcoICRI	GAGCTC	1 cut(s)	745
EcoO109I	RGGNCCY	1 cut(s)	698
EcoRII	CCWGG	2 cut(s)	1015, 1636
EcoT14I	CCWWGG	5 cut(s)	124, 816, 915, 921, 1341
EcoT22I	ATGCAT	1 cut(s)	285
EcoT38I	GRGCYC	1 cut(s)	747
ErhI	CCWWGG	5 cut(s)	124, 816, 915, 921, 1341
Esp3I	CGTCTC	2 cut(s)	582, 1433
FaeI	CATG	9 cut(s)	287, 532, 662, 925, 1135, 1172, 1291, 1345, 1558
FatI	CATG	9 cut(s)	283, 528, 658, 921, 1131, 1168, 1287, 1341, 1554
FauI	CCCGC	1 cut(s)	1382
FauNDI	CATATG	1 cut(s)	904
FbaI	TGATCA	2 cut(s)	220, 417
FblI	GTMKAC	1 cut(s)	1200
Fnu4HI	GCNGC	5 cut(s)	177, 441, 600, 642, 1155
FokI	GGATG	5 cut(s)	203, 794, 903, 1032, 1051
FriOI	GRGCYC	1 cut(s)	747
Fsp4HI	GCNGC	5 cut(s)	177, 441, 600, 642, 1155
FspBI	CTAG	5 cut(s)	353, 542, 584, 981, 1091
GluI	GCNGC	5 cut(s)	177, 441, 600, 642, 1155
HaeIII	GGCC	5 cut(s)	425, 716, 878, 920, 1306
HapII	CCGG	3 cut(s)	345, 548, 1124
Hin1II	CATG	9 cut(s)	287, 532, 662, 925, 1135, 1172, 1291, 1345, 1558
HincII	GTYRAC	2 cut(s)	1141, 1395
HindII	GTYRAC	2 cut(s)	1141, 1395
HindIII	AAGCTT	2 cut(s)	6, 1597
HinfI	GANTC	2 cut(s)	768, 1292
HpaI	GTTAAC	1 cut(s)	1141
HpaII	CCGG	3 cut(s)	345, 548, 1124
HphI	GGTGA	3 cut(s)	904, 965, 1272
Hpy166II	GTNNAC	5 cut(s)	912, 1141, 1201, 1225, 1395
Hpy188I	TCNGA	6 cut(s)	70, 225, 977, 1182, 1431, 1561
Hpy188III	TCNNGA	5 cut(s)	232, 415, 659, 991, 1657
Hpy8I	GTNNAC	5 cut(s)	912, 1141, 1201, 1225, 1395
HpyAV	CCTTC	5 cut(s)	220, 535, 1022, 1509, 1654
HpyCH4III	ACNGT	2 cut(s)	66, 290
HpyCH4IV	ACGT	2 cut(s)	1314, 1653
HpyF10VI	GCNNNNNNNGC	4 cut(s)	608, 751, 1151, 1160
HpyF3I	CTNAG	5 cut(s)	494, 1179, 1428, 1536, 1600
HpySE526I	ACGT	2 cut(s)	1314, 1653
Hsp92II	CATG	9 cut(s)	287, 532, 662, 925, 1135, 1172, 1291, 1345, 1558
Ksp22I	TGATCA	2 cut(s)	220, 417
KspAI	GTTAAC	1 cut(s)	1141
Kzo9I	GATC	6 cut(s)	220, 417, 574, 859, 1023, 1045
LguI	GCTCTTC	1 cut(s)	1337
LmnI	GCTCC	3 cut(s)	128, 821, 1343
Lsp1109I	GCAGC	5 cut(s)	163, 427, 586, 653, 1141
LweI	GCATC	4 cut(s)	140, 181, 270, 1363
MaeI	CTAG	5 cut(s)	353, 542, 584, 981, 1091
MaeII	ACGT	2 cut(s)	1314, 1653
MalI	GATC	6 cut(s)	222, 419, 576, 861, 1025, 1047
MboI	GATC	6 cut(s)	220, 417, 574, 859, 1023, 1045
MfeI	CAATTG	1 cut(s)	1050
MflI	RGATCY	3 cut(s)	574, 859, 1045
MhlI	GDGCHC	2 cut(s)	747, 998
MluCI	AATT	6 cut(s)	245, 297, 559, 569, 634, 1050
MlyI	GAGTC	1 cut(s)	1286
MmeI	TCCRAC	3 cut(s)	535, 1000, 1573
MnlI	CCTC	8 cut(s)	87, 430, 832, 944, 1247, 1288, 1420, 1661
Mph1103I	ATGCAT	1 cut(s)	285
MroXI	GAANNNNTTC	2 cut(s)	23, 1331
MseI	TTAA	4 cut(s)	39, 312, 1140, 1644
MspI	CCGG	3 cut(s)	345, 548, 1124
MspR9I	CCNGG	3 cut(s)	346, 1017, 1638
MunI	CAATTG	1 cut(s)	1050
MvaI	CCWGG	2 cut(s)	1017, 1638
MwoI	GCNNNNNNNGC	4 cut(s)	608, 751, 1151, 1160
NciI	CCSGG	1 cut(s)	346
NcoI	CCATGG	2 cut(s)	921, 1341
NdeI	CATATG	1 cut(s)	904
NdeII	GATC	6 cut(s)	220, 417, 574, 859, 1023, 1045
NlaIII	CATG	9 cut(s)	287, 532, 662, 925, 1135, 1172, 1291, 1345, 1558
NlaIV	GGNNCC	4 cut(s)	267, 343, 1047, 1122
NsiI	ATGCAT	1 cut(s)	285
NspI	RCATGY	1 cut(s)	1558
PagI	TCATGA	1 cut(s)	658
PciSI	GCTCTTC	1 cut(s)	1337
PdmI	GAANNNNTTC	2 cut(s)	23, 1331
PfeI	GAWTC	1 cut(s)	768
PflMI	CCANNNNNTGG	3 cut(s)	712, 1016, 1246
PfoI	TCCNGGA	1 cut(s)	1015
PkrI	GCNGC	5 cut(s)	178, 442, 601, 643, 1156
PleI	GAGTC	1 cut(s)	1286
PpsI	GAGTC	1 cut(s)	1286
PpuMI	RGGWCCY	1 cut(s)	698
PshBI	ATTAAT	1 cut(s)	39
PsiI	TTATAA	1 cut(s)	632
Psp124BI	GAGCTC	1 cut(s)	747
Psp1406I	AACGTT	1 cut(s)	1314
Psp5II	RGGWCCY	1 cut(s)	698
Psp6I	CCWGG	2 cut(s)	1015, 1636
PspGI	CCWGG	2 cut(s)	1015, 1636
PspN4I	GGNNCC	4 cut(s)	267, 343, 1047, 1122
PspPI	GGNCC	4 cut(s)	229, 384, 698, 876
PspPPI	RGGWCCY	1 cut(s)	698
PstI	CTGCAG	1 cut(s)	643
PsuI	RGATCY	3 cut(s)	574, 859, 1045
RsaI	GTAC	3 cut(s)	960, 1110, 1475
RsaNI	GTAC	3 cut(s)	959, 1109, 1474
Rsr2I	CGGWCCG	1 cut(s)	384
RsrII	CGGWCCG	1 cut(s)	384
SacI	GAGCTC	1 cut(s)	747
SapI	GCTCTTC	1 cut(s)	1337
SaqAI	TTAA	4 cut(s)	39, 312, 1140, 1644
SatI	GCNGC	5 cut(s)	177, 441, 600, 642, 1155
Sau3AI	GATC	6 cut(s)	220, 417, 574, 859, 1023, 1045
Sau96I	GGNCC	4 cut(s)	229, 384, 698, 876
ScaI	AGTACT	1 cut(s)	1475
SchI	GAGTC	1 cut(s)	1286
ScrFI	CCNGG	3 cut(s)	346, 1017, 1638
SduI	GDGCHC	2 cut(s)	747, 998
SfaNI	GCATC	4 cut(s)	140, 181, 270, 1363
SfcI	CTRYAG	1 cut(s)	639
SinI	GGWCC	3 cut(s)	229, 384, 698
SmlI	CTYRAG	2 cut(s)	740, 1436
SmoI	CTYRAG	2 cut(s)	740, 1436
Sse9I	AATT	6 cut(s)	245, 297, 559, 569, 634, 1050
SsiI	CCGC	3 cut(s)	339, 387, 1389
SspI	AATATT	1 cut(s)	1486
SspMI	CTAG	5 cut(s)	353, 542, 584, 981, 1091
SstI	GAGCTC	1 cut(s)	747
StyD4I	CCNGG	3 cut(s)	344, 1015, 1636
StyI	CCWWGG	5 cut(s)	124, 816, 915, 921, 1341
TaaI	ACNGT	2 cut(s)	66, 290
TaiI	ACGT	2 cut(s)	1317, 1656
TaqI	TCGA	4 cut(s)	990, 1026, 1295, 1412
TasI	AATT	6 cut(s)	245, 297, 559, 569, 634, 1050
TatI	WGTACW	1 cut(s)	1473
TfiI	GAWTC	1 cut(s)	768
Tru1I	TTAA	4 cut(s)	39, 312, 1140, 1644
Tru9I	TTAA	4 cut(s)	39, 312, 1140, 1644
TscAI	CASTG	2 cut(s)	783, 1540
TseI	GCWGC	5 cut(s)	176, 440, 599, 641, 1154
TspGWI	ACGGA	2 cut(s)	397, 522
TspRI	CASTG	2 cut(s)	783, 1540
Van91I	CCANNNNNTGG	3 cut(s)	712, 1016, 1246
VpaK11BI	GGWCC	3 cut(s)	229, 384, 698
VspI	ATTAAT	1 cut(s)	39
XapI	RAATTY	3 cut(s)	245, 559, 634
XceI	RCATGY	1 cut(s)	1558
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1017
XmiI	GTMKAC	1 cut(s)	1200
XmnI	GAANNNNTTC	2 cut(s)	23, 1331
XspI	CTAG	5 cut(s)	353, 542, 584, 981, 1091
ZrmI	AGTACT	1 cut(s)	1475
Zsp2I	ATGCAT	1 cut(s)	285

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.