Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0011074

Physical Location & Seq

Genomic Coordinates Forward (+)

11161299 .. 11168631

Gene Structure 7333 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G010140.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2106 bp

ATGGTGGTGATGGCAGAATTTGGTATGCTTATTCTTTTCTTGATTGCTATGGGGAATACTGAGGCGGTCTTGAGTTCGGGGCATGGAGGCACTGTTGTCTCTACTAAAGTGGGAATGAAATATCTACTTCTACTTGGCAACACATTGTACTTGCTTTTCATATCCTTTAAGTTTCCCCAGTTTCTTGATATAGCAAAGGCGTTCAGTGGTGATGATGGTTATGACCTGGCCATTGGAGACTCAGATTTGAGTAAACCGTTGTTTAATTCTGTTTATAAGGATACATATCACCGGAAATTGGAAGATAACCAAGATCAGGATGCGCCCGTGAGGCCTAGTAAGGAGCCTATGGAACAGAAGAGAAATGGCTCTAAGACTATAAAGCCACTTCAGCATCGATATGGCCGGATAACTGGTGAGATCATGAGGCGGAGGAATAGAACAAATGAACTTTCGGTGTTTGAGAGGATGGCAGATGAGGCTTGGACATTAGGGTTAAACGCTTGGGAAGAAGTGGATAAACTTGATGTCAGGGAGACAGGAGATAGTTCTATATTTGAGGGAAAACCAGAGTCATGCCCTTCATGGTTATCAATGAGTGGGGAAGAATTCGCAATGGGAGATAGGTTGATGTTCCTTCCTTGTGGGCTTGCTGCTGGTTCTTCTATTACTCTGGTGGGAACATCCCATAATGCTCATAAGGAATATGTGCCTCAGCTTGTAAAGCTGAGAAGGGGTAATGGAATGGTTATGGTCTCGCAGTTCATGGTTGAGTTGCAAGGCTTAAAGTCAGTGGATGGGGAGGACCCGCCAAAGATCCTGCACTTAAATCCACGATTACGAGGAGATTGGAGTCAGCGGCCAGTCATCGAGCACAACACCTGTTATAGGATGCAGTGGGGATCAGCTCAAAGGTGTGACGGTTCAGCATCCAAGAACAGTGAAGAAATGCTAGTTGATGGATATGCGAGGTGTGAAAAGTGGATGCGAAATGATATGGTAGCAGCACAGGAATCCAAGACGAAGACTACCTCATGGTTTAAGCGTTTTATAGGGCGTGAGCAGAAGCCAGAAGTTACTTGGCCCTTCCCCTTTGTGGAGGGTAGACTATTTATCCTGACAATACGAGCTGGTGTAGATGGATTCCATATTAGTGTTGGCGGCAGGCATGTGACTTCATTTCCATATCGGACGGGATTTACACTTGAAGATGCAACTGGATTAGCAATAAAAGGAGACGTGGATGTTCATTCTGTTTATGTTACGTCACTTCCCAGTTCTCATCGAAGTTTCTCACCTCAAAGGGTACTGGAGTTGTCAAAGAAGTGGAAAGCTCATCCTTTACCTAGGACTCCTATTCGACTATTTATTGGGGTTCTTTCTGCTACAAATCATTTTGCAGAGCGCATGGCAGTGAGAAAAACTTGGATGCAATCATCAGCAATCAAGTCCTCAGAAGTAGTCCTCCGTTTCTTTGTTGCATTGAATGCTAGGAAGGAAGTAAATGCAGTACTGAAGAAAGAGGCTGCTTACTTTGGCGATATTGTGATCTTGCCCTTTATGGATCGTTACGAGCTTGTCGTTCTCAAGACCATTTCTATTTGTGAGTTTGGGGTTCAGAATGTGACGGCGGCATACATCATGAAATGTGATGATGACACATTTGTTAGAGTGGATACTGTTTTAAAGGAAATTGAGGGCATCTCTTCTAAAAAGTCTCTTTATATGGGCAATCTTAACCTCTTGCATCGCCCTCTCAGAAGCGGAAAATGGGCTGTAACCTATGAGGAGTGGCCAGAAGAAGTTTATCCCCCATATGCTAATGGCCCTGGATACATAATTTCCATTGATATTGCTAAATTCATTGCCTCTCAGCATGGGAATCAAAGCCTAAGGCTTTTCAAGATGGAAGATGTGAGCATGGGAATGTGGGTTGAGCAATTTAACAGTTCCAGGGCGGCTGTCCAGTACTCCCATAACTGGAAGTTTTGTCAGTATGGGTGTATGGAGAACTATTACACAGCACATTACCAATCTCCGAGACAAATGGTCTGTCTTTGGGACAAGTTGGCTAGAGGTAGAGCTCAATGCTGCAACTTCAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005794 GO:0006029 GO:0006464 GO:0006486 GO:0006493 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008378 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009653 GO:0009888 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0010384 GO:0010404 GO:0010405 GO:0012505 GO:0016740 GO:0016757 GO:0016758 GO:0018193 GO:0018208 GO:0018258 GO:0019538 GO:0021700 GO:0022622 GO:0030154 GO:0032501 GO:0032502 GO:0034645 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043413 GO:0044036 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0048364 GO:0048468 GO:0048469 GO:0048731 GO:0048764 GO:0048765 GO:0048856 GO:0048869 GO:0070085 GO:0071554 GO:0071695 GO:0071704 GO:0080147 GO:0090558 GO:0090627 GO:0099402 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576 GO:1905392 GO:1990714

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Gal-bind_lectin Galactosyl_T

Protein Analysis

701

Amino Acids

79.67

Weight (kDa)

8.76

Isoelectric Point (pI)

35.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Gal-bind_lectin	PF00337	211 - 420	1.5e-28	Galactoside-binding lectin
Galactosyl_T	PF01762	468 - 649	3.6e-33	Galactosyltransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011074)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G21060 AT4G21060
fragaria_vesca	FvH4_3g04990 FvH4_3g04990
malus_domestica	MD05G1278600.v1.1 MD10G1257700.v1.1
prunus_persica	Prupe.4G086100_v2.0.a1
pyrus_communis	pycom05g25930 pycom10g21390
rosa_chinensis	RchiOBHm_Chr5g0014981
rosa_laevigata	RLG00000032157
rosa_multiflora	Rmu_sc0004889.1_g000016
rosa_roxburghii	Rroxscaffold_1G00061600
rosa_rugosa	Rorug05G0022300 Rorug05G0022300
rosa_samantha	Rh5AG117700 Rh5BG114900 Rh5CG126200 Rh5DG114400
rosa_wichuraiana	Rw5G010140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	276
AccI	GTMKAC	1 cut(s)	1105
AciI	CCGC	8 cut(s)	65, 430, 809, 859, 1161, 1631, 1764, 1958
AclWI	GGATC	3 cut(s)	811, 910, 1572
AcoI	YGGCCR	4 cut(s)	228, 403, 860, 1793
AcsI	RAATTY	3 cut(s)	17, 608, 1859
AcuI	CTGAAG	3 cut(s)	374, 1535, 2083
AfaI	GTAC	4 cut(s)	149, 1308, 1512, 1970
AfiI	CCNNNNNNNGG	5 cut(s)	298, 316, 888, 1096, 1980
AgsI	TTSAA	3 cut(s)	1208, 1486, 1903
AhdI	GACNNNNNGTC	1 cut(s)	2048
AjiI	CACGTC	1 cut(s)	1240
AjnI	CCWGG	3 cut(s)	225, 1828, 1952
AluBI	AGCT	7 cut(s)	718, 727, 908, 1130, 1334, 1576, 2084
AluI	AGCT	7 cut(s)	718, 727, 908, 1130, 1334, 1576, 2084
Alw21I	GWGCWC	2 cut(s)	876, 2086
Alw26I	GTCTC	7 cut(s)	103, 231, 530, 760, 1230, 1722, 2035
AlwI	GGATC	3 cut(s)	811, 910, 1572
AoxI	GGCC	7 cut(s)	228, 332, 403, 860, 1082, 1793, 1825
ApeKI	GCWGC	4 cut(s)	653, 1004, 1526, 2091
ApoI	RAATTY	3 cut(s)	17, 608, 1859
ArsI	GACNNNNNNTTYG	2 cut(s)	2038, 2070
AspA2I	CCTAGG	1 cut(s)	1346
AspLEI	GCGC	2 cut(s)	325, 1407
AspS9I	GGNCC	3 cut(s)	805, 1083, 1826
AsuHPI	GGTGA	5 cut(s)	19, 221, 281, 428, 1287
AvaII	GGWCC	1 cut(s)	805
AvrII	CCTAGG	1 cut(s)	1346
AxyI	CCTNAGG	1 cut(s)	1892
BaeI	ACNNNNGTAYC	2 cut(s)	1298, 1331
BalI	TGGCCA	2 cut(s)	230, 1795
BanII	GRGCYC	1 cut(s)	2086
BbsI	GAAGAC	1 cut(s)	1031
Bbv12I	GWGCWC	2 cut(s)	876, 2086
BbvCI	CCTCAGC	1 cut(s)	714
BbvI	GCAGC	4 cut(s)	640, 1016, 1513, 2078
BccI	CCATC	7 cut(s)	4, 209, 463, 791, 953, 1133, 1900
BceAI	ACGGC	1 cut(s)	1644
BciT130I	CCWGG	3 cut(s)	227, 1830, 1954
BciVI	GTATCC	3 cut(s)	274, 1669, 1826
BcoDI	GTCTC	7 cut(s)	103, 231, 530, 760, 1230, 1722, 2035
BfaI	CTAG	5 cut(s)	336, 953, 1347, 1491, 2073
BfuI	GTATCC	3 cut(s)	274, 1669, 1826
BglI	GCCNNNNNGGC	1 cut(s)	331
BisI	GCNGC	8 cut(s)	654, 860, 1005, 1162, 1527, 1632, 1959, 2092
BlnI	CCTAGG	1 cut(s)	1346
BlsI	GCNGC	8 cut(s)	655, 861, 1006, 1163, 1528, 1633, 1960, 2093
BmcAI	AGTACT	2 cut(s)	1512, 1970
Bme1390I	CCNGG	3 cut(s)	227, 1830, 1954
Bme18I	GGWCC	1 cut(s)	805
BmeRI	GACNNNNNGTC	1 cut(s)	2048
BmgBI	CACGTC	1 cut(s)	1240
BmgT120I	GGNCC	3 cut(s)	805, 1083, 1826
BmiI	GGNNCC	2 cut(s)	345, 807
BmrFI	CCNGG	3 cut(s)	227, 1830, 1954
BmrI	ACTGGG	2 cut(s)	172, 1269
BmsI	GCATC	9 cut(s)	310, 403, 882, 938, 975, 1201, 1419, 1710, 1756
BmuI	ACTGGG	2 cut(s)	172, 1269
BpiI	GAAGAC	1 cut(s)	1031
BplI	GAGNNNNNCTC	2 cut(s)	1688, 1720
BpmI	CTGGAG	1 cut(s)	1331
Bpu10I	CCTNAGC	1 cut(s)	714
BpuEI	CTTGAG	2 cut(s)	91, 1571
Bsa29I	ATCGAT	1 cut(s)	397
BsaBI	GATNNNNATC	1 cut(s)	285
BsaI	GGTCTC	1 cut(s)	760
BsaJI	CCNNGG	3 cut(s)	1346, 1828, 1953
BsaWI	WCCGGW	1 cut(s)	291
BsaXI	ACNNNNNCTCC	2 cut(s)	78, 108
Bsc4I	CCNNNNNNNGG	5 cut(s)	298, 316, 888, 1096, 1980
Bse1I	ACTGG	8 cut(s)	178, 418, 863, 1222, 1275, 1314, 1966, 1985
Bse21I	CCTNAGG	1 cut(s)	1892
Bse3DI	GCAATG	2 cut(s)	621, 1863
Bse8I	GATNNNNATC	1 cut(s)	285
BseBI	CCWGG	3 cut(s)	227, 1830, 1954
BseCI	ATCGAT	1 cut(s)	397
BseDI	CCNNGG	3 cut(s)	1346, 1828, 1953
BseJI	GATNNNNATC	1 cut(s)	285
BseLI	CCNNNNNNNGG	5 cut(s)	298, 316, 888, 1096, 1980
BseMI	GCAATG	2 cut(s)	621, 1863
BseMII	CTCAG	7 cut(s)	51, 255, 719, 728, 1467, 1771, 1886
BseNI	ACTGG	8 cut(s)	178, 418, 863, 1222, 1275, 1314, 1966, 1985
BseRI	GAGGAG	2 cut(s)	858, 1802
BseXI	GCAGC	4 cut(s)	640, 1016, 1513, 2078
BsgI	GTGCAG	1 cut(s)	806
BshFI	GGCC	7 cut(s)	230, 334, 405, 862, 1084, 1795, 1827
BshVI	ATCGAT	1 cut(s)	397
BsiHKAI	GWGCWC	2 cut(s)	876, 2086
BsiSI	CCGG	2 cut(s)	292, 406
BslFI	GGGAC	1 cut(s)	2075
BslI	CCNNNNNNNGG	5 cut(s)	298, 316, 888, 1096, 1980
BsmAI	GTCTC	7 cut(s)	103, 231, 530, 760, 1230, 1722, 2035
BsmBI	CGTCTC	1 cut(s)	1230
BsmFI	GGGAC	1 cut(s)	2075
BsmI	GAATGC	1 cut(s)	1492
BsnI	GGCC	7 cut(s)	230, 334, 405, 862, 1084, 1795, 1827
Bso31I	GGTCTC	1 cut(s)	760
Bsp1286I	GDGCHC	2 cut(s)	876, 2086
Bsp143I	GATC	6 cut(s)	313, 420, 816, 902, 1548, 1564
BspACI	CCGC	8 cut(s)	65, 430, 809, 859, 1161, 1631, 1764, 1958
BspANI	GGCC	7 cut(s)	230, 334, 405, 862, 1084, 1795, 1827
BspCNI	CTCAG	7 cut(s)	52, 254, 720, 727, 1466, 1770, 1885
BspDI	ATCGAT	1 cut(s)	397
BspHI	TCATGA	2 cut(s)	423, 1641
BspLI	GGNNCC	2 cut(s)	345, 807
BspPI	GGATC	3 cut(s)	811, 910, 1572
BspTNI	GGTCTC	1 cut(s)	760
BsrDI	GCAATG	2 cut(s)	621, 1863
BsrI	ACTGG	8 cut(s)	178, 418, 863, 1222, 1275, 1314, 1966, 1985
BssECI	CCNNGG	3 cut(s)	1346, 1828, 1953
BssMI	GATC	6 cut(s)	313, 420, 816, 902, 1548, 1564
BssT1I	CCWWGG	1 cut(s)	1346
Bst2UI	CCWGG	3 cut(s)	227, 1830, 1954
Bst4CI	ACNGT	6 cut(s)	94, 258, 923, 941, 1681, 1949
Bst6I	CTCTTC	2 cut(s)	353, 1711
BstAPI	GCANNNNNTGC	1 cut(s)	1487
BstC8I	GCNNGC	2 cut(s)	651, 1166
BstDEI	CTNAG	9 cut(s)	60, 241, 372, 714, 728, 1453, 1757, 1872, 1892
BstENI	CCTNNNNNAGG	1 cut(s)	886
BstHHI	GCGC	2 cut(s)	325, 1407
BstKTI	GATC	6 cut(s)	316, 423, 819, 905, 1551, 1567
BstMAI	GTCTC	7 cut(s)	103, 231, 530, 760, 1230, 1722, 2035
BstMBI	GATC	6 cut(s)	313, 420, 816, 902, 1548, 1564
BstMWI	GCNNNNNNNGC	5 cut(s)	331, 391, 479, 724, 1487
BstNI	CCWGG	3 cut(s)	227, 1830, 1954
BstNSI	RCATGY	1 cut(s)	1172
BstSCI	CCNGG	3 cut(s)	225, 1828, 1952
BstV1I	GCAGC	4 cut(s)	640, 1016, 1513, 2078
BstV2I	GAAGAC	1 cut(s)	1031
BstX2I	RGATCY	1 cut(s)	816
BstYI	RGATCY	1 cut(s)	816
Bsu15I	ATCGAT	1 cut(s)	397
Bsu36I	CCTNAGG	1 cut(s)	1892
BsuI	GTATCC	3 cut(s)	274, 1669, 1826
BsuRI	GGCC	7 cut(s)	230, 334, 405, 862, 1084, 1795, 1827
BsuTUI	ATCGAT	1 cut(s)	397
BtgZI	GCGATG	1 cut(s)	1733
BtrI	CACGTC	1 cut(s)	1240
BtsI	GCAGTG	2 cut(s)	902, 1419
BtsIMutI	CAGTG	6 cut(s)	90, 211, 798, 902, 946, 1419
Cac8I	GCNNGC	2 cut(s)	651, 1166
CciI	TCATGA	2 cut(s)	423, 1641
CfoI	GCGC	2 cut(s)	325, 1407
Cfr13I	GGNCC	3 cut(s)	805, 1083, 1826
ClaI	ATCGAT	1 cut(s)	397
Csp6I	GTAC	4 cut(s)	148, 1307, 1511, 1969
CviQI	GTAC	4 cut(s)	148, 1307, 1511, 1969
DdeI	CTNAG	9 cut(s)	60, 241, 372, 714, 728, 1453, 1757, 1872, 1892
DpnI	GATC	6 cut(s)	315, 422, 818, 904, 1550, 1566
DpnII	GATC	6 cut(s)	313, 420, 816, 902, 1548, 1564
DraI	TTTAAA	1 cut(s)	1686
DriI	GACNNNNNGTC	1 cut(s)	2048
EaeI	YGGCCR	4 cut(s)	228, 403, 860, 1793
Eam1104I	CTCTTC	2 cut(s)	353, 1711
Eam1105I	GACNNNNNGTC	1 cut(s)	2048
EarI	CTCTTC	2 cut(s)	353, 1711
EciI	GGCGGA	1 cut(s)	445
Ecl136II	GAGCTC	1 cut(s)	2084
Eco130I	CCWWGG	1 cut(s)	1346
Eco147I	AGGCCT	1 cut(s)	334
Eco24I	GRGCYC	1 cut(s)	2086
Eco31I	GGTCTC	1 cut(s)	760
Eco47I	GGWCC	1 cut(s)	805
Eco53kI	GAGCTC	1 cut(s)	2084
Eco57I	CTGAAG	3 cut(s)	374, 1535, 2083
Eco81I	CCTNAGG	1 cut(s)	1892
EcoICRI	GAGCTC	1 cut(s)	2084
EcoNI	CCTNNNNNAGG	1 cut(s)	886
EcoO109I	RGGNCCY	1 cut(s)	805
EcoRI	GAATTC	1 cut(s)	608
EcoRII	CCWGG	3 cut(s)	225, 1828, 1952
EcoT14I	CCWWGG	1 cut(s)	1346
EcoT38I	GRGCYC	1 cut(s)	2086
ErhI	CCWWGG	1 cut(s)	1346
Esp3I	CGTCTC	1 cut(s)	1230
FaqI	GGGAC	1 cut(s)	2075
FauI	CCCGC	1 cut(s)	816
FauNDI	CATATG	1 cut(s)	1816
FblI	GTMKAC	1 cut(s)	1105
Fnu4HI	GCNGC	8 cut(s)	654, 860, 1005, 1162, 1527, 1632, 1959, 2092
FriOI	GRGCYC	1 cut(s)	2086
Fsp4HI	GCNGC	8 cut(s)	654, 860, 1005, 1162, 1527, 1632, 1959, 2092
FspBI	CTAG	5 cut(s)	336, 953, 1347, 1491, 2073
GlaI	GCGC	2 cut(s)	324, 1406
GluI	GCNGC	8 cut(s)	654, 860, 1005, 1162, 1527, 1632, 1959, 2092
GsuI	CTGGAG	1 cut(s)	1331
HaeIII	GGCC	7 cut(s)	230, 334, 405, 862, 1084, 1795, 1827
HapII	CCGG	2 cut(s)	292, 406
HhaI	GCGC	2 cut(s)	325, 1407
Hin6I	GCGC	2 cut(s)	323, 1405
HinP1I	GCGC	2 cut(s)	323, 1405
HinfI	GANTC	7 cut(s)	239, 572, 853, 1013, 1143, 1351, 1882
HpaII	CCGG	2 cut(s)	292, 406
HphI	GGTGA	5 cut(s)	19, 221, 281, 428, 1287
Hpy166II	GTNNAC	2 cut(s)	254, 1106
Hpy188I	TCNGA	7 cut(s)	244, 1191, 1456, 1620, 1760, 2040, 2102
Hpy188III	TCNNGA	9 cut(s)	40, 70, 185, 317, 424, 1117, 1588, 1642, 1903
Hpy8I	GTNNAC	2 cut(s)	254, 1106
HpyAV	CCTTC	5 cut(s)	591, 647, 726, 1096, 1489
HpyCH4III	ACNGT	6 cut(s)	94, 258, 923, 941, 1681, 1949
HpyCH4IV	ACGT	2 cut(s)	1239, 1265
HpyF10VI	GCNNNNNNNGC	5 cut(s)	331, 391, 479, 724, 1487
HpyF3I	CTNAG	9 cut(s)	60, 241, 372, 714, 728, 1453, 1757, 1872, 1892
HpySE526I	ACGT	2 cut(s)	1239, 1265
HspAI	GCGC	2 cut(s)	323, 1405
Kzo9I	GATC	6 cut(s)	313, 420, 816, 902, 1548, 1564
LmnI	GCTCC	1 cut(s)	343
Lsp1109I	GCAGC	4 cut(s)	640, 1016, 1513, 2078
LweI	GCATC	9 cut(s)	310, 403, 882, 938, 975, 1201, 1419, 1710, 1756
MaeI	CTAG	5 cut(s)	336, 953, 1347, 1491, 2073
MaeII	ACGT	2 cut(s)	1239, 1265
MaeIII	GTNAC	8 cut(s)	917, 1075, 1171, 1261, 1266, 1568, 1624, 1777
MalI	GATC	6 cut(s)	315, 422, 818, 904, 1550, 1566
MboI	GATC	6 cut(s)	313, 420, 816, 902, 1548, 1564
MflI	RGATCY	1 cut(s)	816
MhlI	GDGCHC	2 cut(s)	876, 2086
MlsI	TGGCCA	2 cut(s)	230, 1795
MluCI	AATT	8 cut(s)	17, 265, 296, 608, 1692, 1839, 1859, 1940
MluNI	TGGCCA	2 cut(s)	230, 1795
MlyI	GAGTC	4 cut(s)	233, 581, 862, 1345
Mox20I	TGGCCA	2 cut(s)	230, 1795
MscI	TGGCCA	2 cut(s)	230, 1795
MseI	TTAA	9 cut(s)	168, 264, 497, 785, 827, 1041, 1685, 1737, 1944
MslI	CAYNNNNRTG	4 cut(s)	399, 1152, 1412, 1925
Msp20I	TGGCCA	2 cut(s)	230, 1795
MspA1I	CMGCKG	1 cut(s)	859
MspI	CCGG	2 cut(s)	292, 406
MspR9I	CCNGG	3 cut(s)	227, 1830, 1954
Mva1269I	GAATGC	1 cut(s)	1492
MvaI	CCWGG	3 cut(s)	227, 1830, 1954
MwoI	GCNNNNNNNGC	5 cut(s)	331, 391, 479, 724, 1487
NdeI	CATATG	1 cut(s)	1816
NdeII	GATC	6 cut(s)	313, 420, 816, 902, 1548, 1564
NlaIV	GGNNCC	2 cut(s)	345, 807
NmuCI	GTSAC	4 cut(s)	917, 1171, 1266, 1624
NspI	RCATGY	1 cut(s)	1172
PagI	TCATGA	2 cut(s)	423, 1641
PceI	AGGCCT	1 cut(s)	334
PcsI	WCGNNNNNNNCGW	1 cut(s)	1578
PctI	GAATGC	1 cut(s)	1492
PfeI	GAWTC	3 cut(s)	1013, 1143, 1882
PkrI	GCNGC	8 cut(s)	655, 861, 1006, 1163, 1528, 1633, 1960, 2093
PleI	GAGTC	4 cut(s)	233, 580, 861, 1345
PpsI	GAGTC	4 cut(s)	233, 580, 861, 1345
PpuMI	RGGWCCY	1 cut(s)	805
PsiI	TTATAA	1 cut(s)	276
Psp124BI	GAGCTC	1 cut(s)	2086
Psp5II	RGGWCCY	1 cut(s)	805
Psp6I	CCWGG	3 cut(s)	225, 1828, 1952
PspGI	CCWGG	3 cut(s)	225, 1828, 1952
PspN4I	GGNNCC	2 cut(s)	345, 807
PspPI	GGNCC	3 cut(s)	805, 1083, 1826
PspPPI	RGGWCCY	1 cut(s)	805
PsuI	RGATCY	1 cut(s)	816
RsaI	GTAC	4 cut(s)	149, 1308, 1512, 1970
RsaNI	GTAC	4 cut(s)	148, 1307, 1511, 1969
RseI	CAYNNNNRTG	4 cut(s)	399, 1152, 1412, 1925
SacI	GAGCTC	1 cut(s)	2086
SaqAI	TTAA	9 cut(s)	168, 264, 497, 785, 827, 1041, 1685, 1737, 1944
SatI	GCNGC	8 cut(s)	654, 860, 1005, 1162, 1527, 1632, 1959, 2092
Sau3AI	GATC	6 cut(s)	313, 420, 816, 902, 1548, 1564
Sau96I	GGNCC	3 cut(s)	805, 1083, 1826
ScaI	AGTACT	2 cut(s)	1512, 1970
SchI	GAGTC	4 cut(s)	233, 581, 862, 1345
ScrFI	CCNGG	3 cut(s)	227, 1830, 1954
SduI	GDGCHC	2 cut(s)	876, 2086
SfaNI	GCATC	9 cut(s)	310, 403, 882, 938, 975, 1201, 1419, 1710, 1756
SinI	GGWCC	1 cut(s)	805
SmiMI	CAYNNNNRTG	4 cut(s)	399, 1152, 1412, 1925
SmlI	CTYRAG	2 cut(s)	70, 1586
SmoI	CTYRAG	2 cut(s)	70, 1586
Sse9I	AATT	8 cut(s)	17, 265, 296, 608, 1692, 1839, 1859, 1940
SseBI	AGGCCT	1 cut(s)	334
SsiI	CCGC	8 cut(s)	65, 430, 809, 859, 1161, 1631, 1764, 1958
SspMI	CTAG	5 cut(s)	336, 953, 1347, 1491, 2073
SstI	GAGCTC	1 cut(s)	2086
StuI	AGGCCT	1 cut(s)	334
StyD4I	CCNGG	3 cut(s)	225, 1828, 1952
StyI	CCWWGG	1 cut(s)	1346
TaaI	ACNGT	6 cut(s)	94, 258, 923, 941, 1681, 1949
TaiI	ACGT	2 cut(s)	1242, 1268
TaqI	TCGA	4 cut(s)	397, 870, 1285, 1360
TasI	AATT	8 cut(s)	17, 265, 296, 608, 1692, 1839, 1859, 1940
TatI	WGTACW	3 cut(s)	147, 1510, 1968
TauI	GCSGC	4 cut(s)	862, 1164, 1634, 1961
TfiI	GAWTC	3 cut(s)	1013, 1143, 1882
Tru1I	TTAA	9 cut(s)	168, 264, 497, 785, 827, 1041, 1685, 1737, 1944
Tru9I	TTAA	9 cut(s)	168, 264, 497, 785, 827, 1041, 1685, 1737, 1944
TscAI	CASTG	6 cut(s)	97, 211, 798, 902, 946, 1419
TseFI	GTSAC	4 cut(s)	917, 1171, 1266, 1624
TseI	GCWGC	4 cut(s)	653, 1004, 1526, 2091
Tsp45I	GTSAC	4 cut(s)	917, 1171, 1266, 1624
TspDTI	ATGAA	9 cut(s)	131, 148, 462, 573, 754, 1167, 1238, 1658, 1852
TspGWI	ACGGA	1 cut(s)	1457
TspRI	CASTG	6 cut(s)	97, 211, 798, 902, 946, 1419
VpaK11BI	GGWCC	1 cut(s)	805
XagI	CCTNNNNNAGG	1 cut(s)	886
XapI	RAATTY	3 cut(s)	17, 608, 1859
XceI	RCATGY	1 cut(s)	1172
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1077, 1154
XmaJI	CCTAGG	1 cut(s)	1346
XmiI	GTMKAC	1 cut(s)	1105
XspI	CTAG	5 cut(s)	336, 953, 1347, 1491, 2073
ZrmI	AGTACT	2 cut(s)	1512, 1970

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.