Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0013920

Physical Location & Seq

Genomic Coordinates Forward (+)

3349082 .. 3351180

Gene Structure 2099 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G10210.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1113 bp

ATGGCGACTTTGGTTGATCCTCCTAATGGGATAAGGAATGAAGGGAAGCATTACTTCTCAATGTGGCAAACTCTGTTCGAGATCGACACTAAGTACATGCCTATCAAGCCTATTGGTCGTGGAGCTTACGGTGTTGTCTGCTCCTCTGTTAACAGTGACACCAACGAGAAAGTTGCTATCAAGAAGATTCACAATGTTTATGAGAATAGGATCGATGCGTTGAGGACTCTTCGGGAGCTCAAGCTTCTACGCCATCTTCGACATGAGAATGTCATTGCTTTGAAAGATGTCATGATGCCAATTCATAAGATGAGCTTCAAGGATGTTTATCTTGTTTATGAGCTCATGGACACTGATCTCCACCAGATTATCAAGTCTTCTCAAGTTCTTAGTAACGATCATTGCCAATACTTCTTGTTCCAGTTGCTTCGAGGGCTCAAGTATATTCATTCAGCCAATATCCTGCACCGAGATTTGAAACCTGGTAACCTTCTTGTCAACGCAAACTGCGATTTAAAGATATGCGATTTTGGACTAGCGCGTGCGAGCAACACCAAGGGTCAGTTCATGACTGAATATGTTGTGACTCGTTGGTACCGAGCCCCAGAGCTTCTCCTCTGTTGTGACAACTATGGAACATCCATTGATGTTTGGTCTGTTGGTTGCATTTTCGCCGAGCTTCTTGGTAGGAAACCGATATTCCAAGGAACGGAATGTCTTAACCAGCTGAAGCTCATTGTCAACATTCTCGGAAGCCAAAGAGAAGAAGATCTTGAGTTCATAGATAACCCGAAAGCTAAAAGATACATTAGATCACTTCCGTACTCACCTGGGATGTCTTTATCCAGACTTTACCCGGGCGCTCATGTTTTGGCCATCGACCTTCTGCAGAAAATGCTTGTTTTTGATCCGTCAAAGAGGATTAGTGTCTCTGAAGCACTCCAGCATCCATACATGGCGCCTCTATATGACCCGAATGCAAACCCTCCTGCTCAAGTTCCTATCGATCTCGATGTAGATGAGGATTTGAGAGAGGAGATGATAAGAGAAATGATGTGGAATGAGATGCTTCACTACCATCCACAAGCTTCAACCTTAAACACTGAGCTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000165 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004707 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009755 GO:0009987 GO:0010033 GO:0010468 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019222 GO:0019538 GO:0023014 GO:0023052 GO:0032870 GO:0035556 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04016 map04016

Pfam Domains

Protein Families

Pkinase

Protein Analysis

370

Amino Acids

42.64

Weight (kDa)

6.5

Isoelectric Point (pI)

43.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	35 - 319	4.9e-69	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	36 - 230	9.4e-31	Protein tyrosine and serine/threonine kinase
Kdo	PF06293	63 - 172	1.1e-07	Lipopolysaccharide kinase (Kdo/WaaP) family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013920)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10210 AT1G10210 AT1G10210 AT1G59580 AT1G59580
fragaria_vesca	FvH4_2g39360
malus_domestica	MD08G1025900.v1.1 MD15G1022600.v1.1
prunus_persica	Prupe.1G374600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0301651
rosa_laevigata	RLG00000011236
rosa_multiflora	Rmu_ssc0000452.1_g000018
rosa_roxburghii	Rroxscaffold_7G00166570
rosa_rugosa	Rorug06G0307600
rosa_samantha	Rh6AG420400 Rh6CG433400
rosa_wichuraiana	Rw6G036350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	594
AccB1I	GGYRCC	2 cut(s)	594, 958
AccII	CGCG	1 cut(s)	541
AclWI	GGATC	3 cut(s)	11, 218, 902
AcoI	YGGCCR	1 cut(s)	873
AcuI	CTGAAG	2 cut(s)	749, 954
AcyI	GRCGYC	1 cut(s)	959
AfaI	GTAC	3 cut(s)	95, 596, 824
AfiI	CCNNNNNNNGG	2 cut(s)	26, 709
AgsI	TTSAA	4 cut(s)	283, 319, 478, 1092
AjnI	CCWGG	2 cut(s)	481, 829
AjuI	GAANNNNNNNTTGG	2 cut(s)	548, 580
Alw21I	GWGCWC	3 cut(s)	240, 345, 1110
Alw26I	GTCTC	1 cut(s)	934
AlwI	GGATC	3 cut(s)	11, 218, 902
Ama87I	CYCGRG	1 cut(s)	856
AoxI	GGCC	1 cut(s)	873
Asp718I	GGTACC	1 cut(s)	594
AspLEI	GCGC	3 cut(s)	541, 863, 961
AsuC2I	CCSGG	2 cut(s)	857, 858
AsuHPI	GGTGA	1 cut(s)	819
AvaI	CYCGRG	1 cut(s)	856
BalI	TGGCCA	1 cut(s)	875
BanI	GGYRCC	2 cut(s)	594, 958
BanII	GRGCYC	5 cut(s)	240, 345, 438, 604, 1110
BbsI	GAAGAC	1 cut(s)	369
Bbv12I	GWGCWC	3 cut(s)	240, 345, 1110
BccI	CCATC	3 cut(s)	261, 884, 1086
BcgI	CGANNNNNNTGC	2 cut(s)	155, 189
BciT130I	CCWGG	2 cut(s)	483, 831
BcnI	CCSGG	2 cut(s)	857, 858
BcoDI	GTCTC	1 cut(s)	934
BfaI	CTAG	1 cut(s)	536
BfmI	CTRYAG	1 cut(s)	887
BfoI	RGCGCY	2 cut(s)	864, 962
BglII	AGATCT	1 cut(s)	769
Bme1390I	CCNGG	4 cut(s)	483, 831, 857, 858
BmeT110I	CYCGRG	1 cut(s)	856
BmiI	GGNNCC	2 cut(s)	596, 960
BmrFI	CCNGG	4 cut(s)	483, 831, 857, 858
BmsI	GCATC	4 cut(s)	205, 285, 955, 1056
BpiI	GAAGAC	1 cut(s)	369
BpmI	CTGGAG	1 cut(s)	926
BpuEI	CTTGAG	5 cut(s)	224, 366, 422, 794, 978
BpuMI	CCSGG	2 cut(s)	857, 858
Bsa29I	ATCGAT	2 cut(s)	213, 1005
BsaBI	GATNNNNATC	1 cut(s)	327
BsaHI	GRCGYC	1 cut(s)	959
BsaJI	CCNNGG	4 cut(s)	555, 703, 830, 856
Bsc4I	CCNNNNNNNGG	2 cut(s)	26, 709
Bse1I	ACTGG	1 cut(s)	421
Bse3DI	GCAATG	2 cut(s)	273, 400
Bse8I	GATNNNNATC	1 cut(s)	327
BseBI	CCWGG	2 cut(s)	483, 831
BseCI	ATCGAT	2 cut(s)	213, 1005
BseDI	CCNNGG	4 cut(s)	555, 703, 830, 856
BseGI	GGATG	5 cut(s)	328, 638, 840, 946, 1078
BseJI	GATNNNNATC	1 cut(s)	327
BseLI	CCNNNNNNNGG	2 cut(s)	26, 709
BseMI	GCAATG	2 cut(s)	273, 400
BseMII	CTCAG	1 cut(s)	1095
BseNI	ACTGG	1 cut(s)	421
BseRI	GAGGAG	3 cut(s)	133, 605, 1049
BsgI	GTGCAG	1 cut(s)	449
Bsh1236I	CGCG	1 cut(s)	541
BshFI	GGCC	1 cut(s)	875
BshNI	GGYRCC	2 cut(s)	594, 958
BshVI	ATCGAT	2 cut(s)	213, 1005
BsiHKAI	GWGCWC	3 cut(s)	240, 345, 1110
BsiHKCI	CYCGRG	1 cut(s)	856
BsiSI	CCGG	1 cut(s)	857
BslI	CCNNNNNNNGG	2 cut(s)	26, 709
BsmAI	GTCTC	1 cut(s)	934
BsmI	GAATGC	1 cut(s)	982
BsnI	GGCC	1 cut(s)	875
BsoBI	CYCGRG	1 cut(s)	856
Bsp1286I	GDGCHC	5 cut(s)	240, 345, 438, 604, 1110
Bsp143I	GATC	9 cut(s)	16, 81, 210, 355, 397, 769, 812, 907, 1006
BspANI	GGCC	1 cut(s)	875
BspCNI	CTCAG	1 cut(s)	1096
BspDI	ATCGAT	2 cut(s)	213, 1005
BspFNI	CGCG	1 cut(s)	541
BspHI	TCATGA	2 cut(s)	291, 567
BspLI	GGNNCC	2 cut(s)	596, 960
BspMAI	CTGCAG	1 cut(s)	891
BspPI	GGATC	3 cut(s)	11, 218, 902
BspT107I	GGYRCC	2 cut(s)	594, 958
BsrDI	GCAATG	2 cut(s)	273, 400
BsrI	ACTGG	1 cut(s)	421
BssECI	CCNNGG	4 cut(s)	555, 703, 830, 856
BssMI	GATC	9 cut(s)	16, 81, 210, 355, 397, 769, 812, 907, 1006
BssNI	GRCGYC	1 cut(s)	959
BssT1I	CCWWGG	2 cut(s)	555, 703
Bst2UI	CCWGG	2 cut(s)	483, 831
Bst4CI	ACNGT	2 cut(s)	131, 155
Bst6I	CTCTTC	1 cut(s)	234
BstACI	GRCGYC	1 cut(s)	959
BstAPI	GCANNNNNTGC	1 cut(s)	895
BstC8I	GCNNGC	2 cut(s)	543, 547
BstDEI	CTNAG	3 cut(s)	90, 389, 1104
BstEII	GGTNACC	1 cut(s)	485
BstF5I	GGATG	5 cut(s)	328, 638, 840, 946, 1078
BstFNI	CGCG	1 cut(s)	541
BstH2I	RGCGCY	2 cut(s)	864, 962
BstHHI	GCGC	3 cut(s)	541, 863, 961
BstKTI	GATC	9 cut(s)	19, 84, 213, 358, 400, 772, 815, 910, 1009
BstMAI	GTCTC	1 cut(s)	934
BstMBI	GATC	9 cut(s)	16, 81, 210, 355, 397, 769, 812, 907, 1006
BstMWI	GCNNNNNNNGC	3 cut(s)	106, 433, 895
BstNI	CCWGG	2 cut(s)	483, 831
BstNSI	RCATGY	1 cut(s)	100
BstPI	GGTNACC	1 cut(s)	485
BstSCI	CCNGG	4 cut(s)	481, 829, 855, 856
BstSFI	CTRYAG	1 cut(s)	887
BstUI	CGCG	1 cut(s)	541
BstV2I	GAAGAC	1 cut(s)	369
BstX2I	RGATCY	1 cut(s)	769
BstYI	RGATCY	1 cut(s)	769
Bsu15I	ATCGAT	2 cut(s)	213, 1005
BsuRI	GGCC	1 cut(s)	875
BsuTUI	ATCGAT	2 cut(s)	213, 1005
BtsCI	GGATG	5 cut(s)	328, 638, 840, 946, 1078
BtsIMutI	CAGTG	3 cut(s)	160, 351, 1101
Cac8I	GCNNGC	2 cut(s)	543, 547
CciI	TCATGA	2 cut(s)	291, 567
CfoI	GCGC	3 cut(s)	541, 863, 961
Cfr9I	CCCGGG	1 cut(s)	856
ClaI	ATCGAT	2 cut(s)	213, 1005
CsiI	ACCWGGT	1 cut(s)	481
Csp6I	GTAC	3 cut(s)	94, 595, 823
CviAII	CATG	7 cut(s)	97, 263, 292, 346, 568, 866, 955
CviQI	GTAC	3 cut(s)	94, 595, 823
DdeI	CTNAG	3 cut(s)	90, 389, 1104
DinI	GGCGCC	1 cut(s)	960
DpnI	GATC	9 cut(s)	18, 83, 212, 357, 399, 771, 814, 909, 1008
DpnII	GATC	9 cut(s)	16, 81, 210, 355, 397, 769, 812, 907, 1006
DraI	TTTAAA	1 cut(s)	516
EaeI	YGGCCR	1 cut(s)	873
Eam1104I	CTCTTC	1 cut(s)	234
EarI	CTCTTC	1 cut(s)	234
Ecl136II	GAGCTC	3 cut(s)	238, 343, 1108
Eco130I	CCWWGG	2 cut(s)	555, 703
Eco24I	GRGCYC	5 cut(s)	240, 345, 438, 604, 1110
Eco53kI	GAGCTC	3 cut(s)	238, 343, 1108
Eco57I	CTGAAG	2 cut(s)	749, 954
Eco88I	CYCGRG	1 cut(s)	856
Eco91I	GGTNACC	1 cut(s)	485
EcoICRI	GAGCTC	3 cut(s)	238, 343, 1108
EcoO65I	GGTNACC	1 cut(s)	485
EcoRII	CCWGG	2 cut(s)	481, 829
EcoT14I	CCWWGG	2 cut(s)	555, 703
EcoT38I	GRGCYC	5 cut(s)	240, 345, 438, 604, 1110
EgeI	GGCGCC	1 cut(s)	960
EheI	GGCGCC	1 cut(s)	960
ErhI	CCWWGG	2 cut(s)	555, 703
FaeI	CATG	7 cut(s)	100, 266, 295, 349, 571, 869, 958
FalI	AAGNNNNNCTT	6 cut(s)	38, 70, 299, 331, 756, 788
FatI	CATG	7 cut(s)	96, 262, 291, 345, 567, 865, 954
FokI	GGATG	5 cut(s)	335, 625, 847, 933, 1065
FriOI	GRGCYC	5 cut(s)	240, 345, 438, 604, 1110
FspBI	CTAG	1 cut(s)	536
GlaI	GCGC	3 cut(s)	540, 862, 960
GsuI	CTGGAG	1 cut(s)	926
HaeII	RGCGCY	2 cut(s)	864, 962
HaeIII	GGCC	1 cut(s)	875
HapII	CCGG	1 cut(s)	857
HhaI	GCGC	3 cut(s)	541, 863, 961
Hin1I	GRCGYC	1 cut(s)	959
Hin1II	CATG	7 cut(s)	100, 266, 295, 349, 571, 869, 958
Hin6I	GCGC	3 cut(s)	539, 861, 959
HinP1I	GCGC	3 cut(s)	539, 861, 959
HincII	GTYRAC	3 cut(s)	151, 499, 742
HindII	GTYRAC	3 cut(s)	151, 499, 742
HindIII	AAGCTT	2 cut(s)	242, 1086
HinfI	GANTC	3 cut(s)	187, 226, 586
HpaI	GTTAAC	1 cut(s)	151
HpaII	CCGG	1 cut(s)	857
HphI	GGTGA	1 cut(s)	819
Hpy166II	GTNNAC	3 cut(s)	151, 499, 742
Hpy188I	TCNGA	3 cut(s)	752, 934, 1112
Hpy188III	TCNNGA	8 cut(s)	79, 181, 233, 292, 568, 773, 846, 1010
Hpy8I	GTNNAC	3 cut(s)	151, 499, 742
HpyAV	CCTTC	3 cut(s)	35, 500, 893
HpyCH4III	ACNGT	2 cut(s)	131, 155
HpyCH4V	TGCA	4 cut(s)	466, 666, 889, 980
HpyF10VI	GCNNNNNNNGC	3 cut(s)	106, 433, 895
HpyF3I	CTNAG	3 cut(s)	90, 389, 1104
Hsp92I	GRCGYC	1 cut(s)	959
Hsp92II	CATG	7 cut(s)	100, 266, 295, 349, 571, 869, 958
HspAI	GCGC	3 cut(s)	539, 861, 959
KasI	GGCGCC	1 cut(s)	958
KpnI	GGTACC	1 cut(s)	598
KspAI	GTTAAC	1 cut(s)	151
Kzo9I	GATC	9 cut(s)	16, 81, 210, 355, 397, 769, 812, 907, 1006
LmnI	GCTCC	3 cut(s)	122, 146, 235
LweI	GCATC	4 cut(s)	205, 285, 955, 1056
MabI	ACCWGGT	1 cut(s)	481
MaeI	CTAG	1 cut(s)	536
MaeIII	GTNAC	5 cut(s)	155, 392, 485, 583, 623
MalI	GATC	9 cut(s)	18, 83, 212, 357, 399, 771, 814, 909, 1008
MboI	GATC	9 cut(s)	16, 81, 210, 355, 397, 769, 812, 907, 1006
MboII	GAAGA	6 cut(s)	196, 221, 248, 369, 776, 779
MflI	RGATCY	1 cut(s)	769
MhlI	GDGCHC	5 cut(s)	240, 345, 438, 604, 1110
MlsI	TGGCCA	1 cut(s)	875
MluCI	AATT	1 cut(s)	300
MluNI	TGGCCA	1 cut(s)	875
Mly113I	GGCGCC	1 cut(s)	959
MlyI	GAGTC	2 cut(s)	220, 580
Mox20I	TGGCCA	1 cut(s)	875
MscI	TGGCCA	1 cut(s)	875
MseI	TTAA	4 cut(s)	150, 515, 720, 1097
MslI	CAYNNNNRTG	1 cut(s)	267
Msp20I	TGGCCA	1 cut(s)	875
MspA1I	CMGCKG	1 cut(s)	727
MspI	CCGG	1 cut(s)	857
MspR9I	CCNGG	4 cut(s)	483, 831, 857, 858
Mva1269I	GAATGC	1 cut(s)	982
MvaI	CCWGG	2 cut(s)	483, 831
MvnI	CGCG	1 cut(s)	541
MwoI	GCNNNNNNNGC	3 cut(s)	106, 433, 895
NarI	GGCGCC	1 cut(s)	959
NciI	CCSGG	2 cut(s)	857, 858
NdeII	GATC	9 cut(s)	16, 81, 210, 355, 397, 769, 812, 907, 1006
NlaIII	CATG	7 cut(s)	100, 266, 295, 349, 571, 869, 958
NlaIV	GGNNCC	2 cut(s)	596, 960
NmeAIII	GCCGAG	1 cut(s)	700
NmuCI	GTSAC	3 cut(s)	155, 583, 623
NspI	RCATGY	1 cut(s)	100
PagI	TCATGA	2 cut(s)	291, 567
PcsI	WCGNNNNNNNCGW	3 cut(s)	256, 507, 595
PctI	GAATGC	1 cut(s)	982
PfeI	GAWTC	1 cut(s)	187
PleI	GAGTC	2 cut(s)	220, 580
PluTI	GGCGCC	1 cut(s)	962
PpsI	GAGTC	2 cut(s)	220, 580
Psp124BI	GAGCTC	3 cut(s)	240, 345, 1110
Psp6I	CCWGG	2 cut(s)	481, 829
PspEI	GGTNACC	1 cut(s)	485
PspGI	CCWGG	2 cut(s)	481, 829
PspN4I	GGNNCC	2 cut(s)	596, 960
PstI	CTGCAG	1 cut(s)	891
PsuI	RGATCY	1 cut(s)	769
PvuII	CAGCTG	1 cut(s)	727
RsaI	GTAC	3 cut(s)	95, 596, 824
RsaNI	GTAC	3 cut(s)	94, 595, 823
RseI	CAYNNNNRTG	1 cut(s)	267
SacI	GAGCTC	3 cut(s)	240, 345, 1110
SaqAI	TTAA	4 cut(s)	150, 515, 720, 1097
Sau3AI	GATC	9 cut(s)	16, 81, 210, 355, 397, 769, 812, 907, 1006
SchI	GAGTC	2 cut(s)	220, 580
ScrFI	CCNGG	4 cut(s)	483, 831, 857, 858
SduI	GDGCHC	5 cut(s)	240, 345, 438, 604, 1110
SexAI	ACCWGGT	1 cut(s)	481
SfaNI	GCATC	4 cut(s)	205, 285, 955, 1056
SfcI	CTRYAG	1 cut(s)	887
SfoI	GGCGCC	1 cut(s)	960
SmaI	CCCGGG	1 cut(s)	858
SmiMI	CAYNNNNRTG	1 cut(s)	267
SmlI	CTYRAG	5 cut(s)	239, 381, 437, 773, 993
SmoI	CTYRAG	5 cut(s)	239, 381, 437, 773, 993
Sse9I	AATT	1 cut(s)	300
SspDI	GGCGCC	1 cut(s)	958
SspMI	CTAG	1 cut(s)	536
SstI	GAGCTC	3 cut(s)	240, 345, 1110
StyD4I	CCNGG	4 cut(s)	481, 829, 855, 856
StyI	CCWWGG	2 cut(s)	555, 703
TaaI	ACNGT	2 cut(s)	131, 155
TaqI	TCGA	8 cut(s)	78, 84, 213, 259, 430, 879, 1005, 1011
TasI	AATT	1 cut(s)	300
TatI	WGTACW	1 cut(s)	93
TfiI	GAWTC	1 cut(s)	187
Tru1I	TTAA	4 cut(s)	150, 515, 720, 1097
Tru9I	TTAA	4 cut(s)	150, 515, 720, 1097
TscAI	CASTG	3 cut(s)	160, 358, 1108
TseFI	GTSAC	3 cut(s)	155, 583, 623
Tsp45I	GTSAC	3 cut(s)	155, 583, 623
TspDTI	ATGAA	5 cut(s)	54, 293, 437, 556, 769
TspGWI	ACGGA	3 cut(s)	725, 810, 900
TspMI	CCCGGG	1 cut(s)	856
TspRI	CASTG	3 cut(s)	160, 358, 1108
XceI	RCATGY	1 cut(s)	100
XmaI	CCCGGG	1 cut(s)	856
XspI	CTAG	1 cut(s)	536

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.