AT1G59580

mitogen-activated protein kinase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Forward (+)
21884018 .. 21886051
2034 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G59580.1

Sequence Viewer

Length: 1131 bp
ATGGCGACTCCTGTTGATCCACCTAATGGAATTAGGAATCAAGGGAAGCATTACTTCTCAATGTGGCAAACACTTTTCGAGATCGATACCAAATACGTGCCTATCAAACCGATAGGCCGAGGCGCGTACGGTGTGGTTTGCTCTTCGGTTAACAGAGAGAGTAATGAGAGAGTGGCGATCAAGAAGATCCACAATGTGTTTGAGAATAGGATTGATGCGTTGAGGACTCTTAGGGAGCTCAAGCTTCTACGTCATCTTCGACATGAGAATGTGGTTGCTCTTAAAGATGTAATGATGGCTAATCATAAGAGAAGCTTTAAGGATGTTTATCTTGTTTATGAGCTTATGGATACTGATCTTCATCAGATTATTAAGTCTTCTCAAGTTCTAAGTAATGACCATTGCCAATACTTCTTGTTCCAGTTGCTTCGAGGGCTCAAGTATATTCATTCAGCAAACATTCTCCATCGGGATCTGAAACCCGGTAACCTCCTTGTGAATGCAAACTGCGACTTAAAGATATGTGACTTTGGGCTAGCGAGGACGAGCAACACCAAAGGTCAGTTCATGACTGAATATGTTGTGACTAGATGGTACCGAGCACCAGAGCTACTCCTCTGTTGTGACAACTATGGAACCTCCATTGATGTCTGGTCAGTCGGTTGCATATTCGCCGAGCTTCTTGGAAGAAAACCAGTATTCCCGGGAACAGAATGTCTAAACCAGATTAAACTCATCATTAACATTTTGGGTAGCCAGAGAGAGGAAGATCTCGAGTTTATAGATAACCCAAAAGCCAAAAGATACATAGAATCACTCCCTTACTCACCAGGGATATCATTCTCTCGTCTTTACCCGGGTGCAAATGTTTTAGCCATTGATCTGCTTCAGAAAATGCTCGTTCTTGACCCTTCGAAAAGGATTAGTGTCACGGAAGCGCTTCAACATCCTTACATGGCGCCTTTATATGACCCGAGTGCAAATCCTCCTGCTCAAGTTCCTATTGATCTCGATGTAGATGAAGACGAGGATTTGGGAGCAGAGATGATAAGAGAATTAATGTGGAAGGAAATGATTCATTATCATCCAGAAGCTGCTACCATAAACAACAATGAGGTCTCTGAGTTTTGA

Protein Analysis

376

Amino Acids

43.12

Weight (kDa)

6.19

Isoelectric Point (pI)

41.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 33 - 319 2e-69 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 36 - 229 3.4e-31 Protein tyrosine and serine/threonine kinase
Kdo PF06293 63 - 172 1.9e-06 Lipopolysaccharide kinase (Kdo/WaaP) family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0013920)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G10210 AT1G10210 AT1G10210 AT1G59580 AT1G59580
fragaria_vesca FvH4_2g39360
malus_domestica MD08G1025900.v1.1 MD15G1022600.v1.1
prunus_persica Prupe.1G374600_v2.0.a1
rosa_chinensis RchiOBHm_Chr6g0301651
rosa_laevigata RLG00000011236
rosa_multiflora Rmu_ssc0000452.1_g000018
rosa_roxburghii Rroxscaffold_7G00166570
rosa_rugosa Rorug06G0307600
rosa_samantha Rh6AG420400 Rh6CG433400
rosa_wichuraiana Rw6G036350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 594
AccB1I GGYRCC 2 cut(s) 594, 958
AccB7I CCANNNNNTGG 1 cut(s) 26
AccII CGCG 1 cut(s) 125
AclWI GGATC 3 cut(s) 11, 181, 480
AcuI CTGAAG 1 cut(s) 872
AcyI GRCGYC 1 cut(s) 959
AdeI CACNNNGTG 1 cut(s) 196
AfaI GTAC 2 cut(s) 128, 596
AfeI AGCGCT 1 cut(s) 939
AfiI CCNNNNNNNGG 2 cut(s) 26, 763
AgsI TTSAA 1 cut(s) 944
AjnI CCWGG 1 cut(s) 829
AjuI GAANNNNNNNTTGG 2 cut(s) 548, 580
AluBI AGCT 7 cut(s) 238, 244, 315, 343, 610, 679, 1094
AluI AGCT 7 cut(s) 238, 244, 315, 343, 610, 679, 1094
Alw21I GWGCWC 2 cut(s) 240, 604
Alw26I GTCTC 1 cut(s) 1123
AlwI GGATC 3 cut(s) 11, 181, 480
AlwNI CAGNNNCTG 1 cut(s) 1094
Ama87I CYCGRG 4 cut(s) 703, 773, 856, 973
Aor51HI AGCGCT 1 cut(s) 939
AoxI GGCC 1 cut(s) 115
ApeKI GCWGC 1 cut(s) 1094
AseI ATTAAT 1 cut(s) 1058
Asp700I GAANNNNTTC 2 cut(s) 939, 1074
Asp718I GGTACC 1 cut(s) 594
AspLEI GCGC 3 cut(s) 125, 940, 961
AsuC2I CCSGG 5 cut(s) 483, 704, 705, 857, 858
AsuHPI GGTGA 1 cut(s) 819
AsuII TTCGAA 1 cut(s) 914
AsuNHI GCTAGC 1 cut(s) 535
AvaI CYCGRG 4 cut(s) 703, 773, 856, 973
BanI GGYRCC 2 cut(s) 594, 958
BanII GRGCYC 2 cut(s) 240, 438
BbsI GAAGAC 2 cut(s) 369, 1029
Bbv12I GWGCWC 2 cut(s) 240, 604
BbvI GCAGC 1 cut(s) 1081
BccI CCATC 3 cut(s) 289, 474, 585
BciT130I CCWGG 1 cut(s) 831
BciVI GTATCC 1 cut(s) 343
BcnI CCSGG 5 cut(s) 483, 704, 705, 857, 858
BcoDI GTCTC 1 cut(s) 1123
BfaI CTAG 2 cut(s) 536, 588
BfoI RGCGCY 2 cut(s) 941, 962
BfuI GTATCC 1 cut(s) 343
BglII AGATCT 1 cut(s) 769
BisI GCNGC 1 cut(s) 1095
BlsI GCNGC 1 cut(s) 1096
Bme1390I CCNGG 6 cut(s) 483, 704, 705, 831, 857, 858
BmeT110I CYCGRG 4 cut(s) 703, 773, 856, 973
BmiI GGNNCC 3 cut(s) 596, 637, 960
BmrFI CCNGG 6 cut(s) 483, 704, 705, 831, 857, 858
BmsI GCATC 1 cut(s) 205
BmtI GCTAGC 1 cut(s) 539
BpiI GAAGAC 2 cut(s) 369, 1029
Bpu14I TTCGAA 1 cut(s) 914
BpuEI CTTGAG 4 cut(s) 224, 366, 422, 978
BpuMI CCSGG 5 cut(s) 483, 704, 705, 857, 858
Bsa29I ATCGAT 1 cut(s) 84
BsaAI YACGTR 1 cut(s) 97
BsaBI GATNNNNATC 3 cut(s) 327, 354, 360
BsaHI GRCGYC 1 cut(s) 959
BsaI GGTCTC 1 cut(s) 1123
BsaJI CCNNGG 4 cut(s) 118, 703, 830, 856
Bsc4I CCNNNNNNNGG 2 cut(s) 26, 763
Bse1I ACTGG 2 cut(s) 421, 695
Bse3DI GCAATG 1 cut(s) 400
Bse8I GATNNNNATC 3 cut(s) 327, 354, 360
BseBI CCWGG 1 cut(s) 831
BseCI ATCGAT 1 cut(s) 84
BseDI CCNNGG 4 cut(s) 118, 703, 830, 856
BseGI GGATG 3 cut(s) 328, 946, 1084
BseJI GATNNNNATC 3 cut(s) 327, 354, 360
BseLI CCNNNNNNNGG 2 cut(s) 26, 763
BseMI GCAATG 1 cut(s) 400
BseMII CTCAG 1 cut(s) 1113
BseNI ACTGG 2 cut(s) 421, 695
BseRI GAGGAG 1 cut(s) 605
BseXI GCAGC 1 cut(s) 1081
Bsh1236I CGCG 1 cut(s) 125
BshFI GGCC 1 cut(s) 117
BshNI GGYRCC 2 cut(s) 594, 958
BshVI ATCGAT 1 cut(s) 84
BsiHKAI GWGCWC 2 cut(s) 240, 604
BsiHKCI CYCGRG 4 cut(s) 703, 773, 856, 973
BsiSI CCGG 3 cut(s) 483, 704, 857
BsiWI CGTACG 1 cut(s) 126
BslI CCNNNNNNNGG 2 cut(s) 26, 763
BsmAI GTCTC 1 cut(s) 1123
BsmI GAATGC 1 cut(s) 505
BsnI GGCC 1 cut(s) 117
Bso31I GGTCTC 1 cut(s) 1123
BsoBI CYCGRG 4 cut(s) 703, 773, 856, 973
Bsp119I TTCGAA 1 cut(s) 914
Bsp1286I GDGCHC 3 cut(s) 240, 438, 604
Bsp143I GATC 9 cut(s) 16, 81, 177, 186, 355, 472, 769, 880, 1006
BspANI GGCC 1 cut(s) 117
BspCNI CTCAG 1 cut(s) 1114
BspDI ATCGAT 1 cut(s) 84
BspFNI CGCG 1 cut(s) 125
BspHI TCATGA 1 cut(s) 567
BspLI GGNNCC 3 cut(s) 596, 637, 960
BspOI GCTAGC 1 cut(s) 539
BspPI GGATC 3 cut(s) 11, 181, 480
BspQI GCTCTTC 1 cut(s) 148
BspT104I TTCGAA 1 cut(s) 914
BspT107I GGYRCC 2 cut(s) 594, 958
BspTNI GGTCTC 1 cut(s) 1123
BsrDI GCAATG 1 cut(s) 400
BsrI ACTGG 2 cut(s) 421, 695
BssECI CCNNGG 4 cut(s) 118, 703, 830, 856
BssMI GATC 9 cut(s) 16, 81, 177, 186, 355, 472, 769, 880, 1006
BssNI GRCGYC 1 cut(s) 959
Bst2UI CCWGG 1 cut(s) 831
Bst4CI ACNGT 1 cut(s) 131
Bst6I CTCTTC 1 cut(s) 148
BstACI GRCGYC 1 cut(s) 959
BstBAI YACGTR 1 cut(s) 97
BstBI TTCGAA 1 cut(s) 914
BstC8I GCNNGC 1 cut(s) 537
BstDEI CTNAG 3 cut(s) 230, 389, 1122
BstEII GGTNACC 1 cut(s) 485
BstF5I GGATG 3 cut(s) 328, 946, 1084
BstFNI CGCG 1 cut(s) 125
BstH2I RGCGCY 2 cut(s) 941, 962
BstHHI GCGC 3 cut(s) 125, 940, 961
BstKTI GATC 9 cut(s) 19, 84, 180, 189, 358, 475, 772, 883, 1009
BstMAI GTCTC 1 cut(s) 1123
BstMBI GATC 9 cut(s) 16, 81, 177, 186, 355, 472, 769, 880, 1006
BstMWI GCNNNNNNNGC 1 cut(s) 433
BstNI CCWGG 1 cut(s) 831
BstPI GGTNACC 1 cut(s) 485
BstSCI CCNGG 6 cut(s) 481, 702, 703, 829, 855, 856
BstUI CGCG 1 cut(s) 125
BstV1I GCAGC 1 cut(s) 1081
BstV2I GAAGAC 2 cut(s) 369, 1029
BstX2I RGATCY 3 cut(s) 186, 472, 769
BstYI RGATCY 3 cut(s) 186, 472, 769
Bsu15I ATCGAT 1 cut(s) 84
BsuI GTATCC 1 cut(s) 343
BsuRI GGCC 1 cut(s) 117
BsuTUI ATCGAT 1 cut(s) 84
BtsCI GGATG 3 cut(s) 328, 946, 1084
Cac8I GCNNGC 1 cut(s) 537
CaiI CAGNNNCTG 1 cut(s) 1094
CciI TCATGA 1 cut(s) 567
CfoI GCGC 3 cut(s) 125, 940, 961
Cfr9I CCCGGG 2 cut(s) 703, 856
ClaI ATCGAT 1 cut(s) 84
Csp6I GTAC 2 cut(s) 127, 595
CviAII CATG 3 cut(s) 263, 568, 955
CviQI GTAC 2 cut(s) 127, 595
DdeI CTNAG 3 cut(s) 230, 389, 1122
DinI GGCGCC 1 cut(s) 960
DpnI GATC 9 cut(s) 18, 83, 179, 188, 357, 474, 771, 882, 1008
DpnII GATC 9 cut(s) 16, 81, 177, 186, 355, 472, 769, 880, 1006
DraIII CACNNNGTG 1 cut(s) 196
Eam1104I CTCTTC 1 cut(s) 148
EarI CTCTTC 1 cut(s) 148
Ecl136II GAGCTC 1 cut(s) 238
Eco24I GRGCYC 2 cut(s) 240, 438
Eco31I GGTCTC 1 cut(s) 1123
Eco32I GATATC 1 cut(s) 837
Eco47III AGCGCT 1 cut(s) 939
Eco53kI GAGCTC 1 cut(s) 238
Eco57I CTGAAG 1 cut(s) 872
Eco88I CYCGRG 4 cut(s) 703, 773, 856, 973
Eco91I GGTNACC 1 cut(s) 485
EcoICRI GAGCTC 1 cut(s) 238
EcoO65I GGTNACC 1 cut(s) 485
EcoRII CCWGG 1 cut(s) 829
EcoRV GATATC 1 cut(s) 837
EcoT38I GRGCYC 2 cut(s) 240, 438
EgeI GGCGCC 1 cut(s) 960
EheI GGCGCC 1 cut(s) 960
FaeI CATG 3 cut(s) 266, 571, 958
FalI AAGNNNNNCTT 4 cut(s) 38, 70, 299, 331
FatI CATG 3 cut(s) 262, 567, 954
Fnu4HI GCNGC 1 cut(s) 1095
FokI GGATG 3 cut(s) 335, 933, 1071
FriOI GRGCYC 2 cut(s) 240, 438
Fsp4HI GCNGC 1 cut(s) 1095
FspBI CTAG 2 cut(s) 536, 588
GlaI GCGC 3 cut(s) 124, 939, 960
GluI GCNGC 1 cut(s) 1095
HaeII RGCGCY 2 cut(s) 941, 962
HaeIII GGCC 1 cut(s) 117
HapII CCGG 3 cut(s) 483, 704, 857
HhaI GCGC 3 cut(s) 125, 940, 961
Hin1I GRCGYC 1 cut(s) 959
Hin1II CATG 3 cut(s) 266, 571, 958
Hin6I GCGC 3 cut(s) 123, 938, 959
HinP1I GCGC 3 cut(s) 123, 938, 959
HincII GTYRAC 1 cut(s) 151
HindII GTYRAC 1 cut(s) 151
HindIII AAGCTT 2 cut(s) 242, 313
HinfI GANTC 5 cut(s) 7, 37, 226, 812, 1075
HpaI GTTAAC 1 cut(s) 151
HpaII CCGG 3 cut(s) 483, 704, 857
HphI GGTGA 1 cut(s) 819
Hpy166II GTNNAC 1 cut(s) 151
Hpy188I TCNGA 4 cut(s) 366, 477, 891, 1123
Hpy188III TCNNGA 8 cut(s) 79, 181, 470, 568, 773, 905, 1010, 1088
Hpy8I GTNNAC 1 cut(s) 151
HpyAV CCTTC 2 cut(s) 921, 1060
HpyCH4III ACNGT 1 cut(s) 131
HpyCH4IV ACGT 2 cut(s) 96, 250
HpyCH4V TGCA 4 cut(s) 503, 666, 863, 980
HpyF10VI GCNNNNNNNGC 1 cut(s) 433
HpyF3I CTNAG 3 cut(s) 230, 389, 1122
HpySE526I ACGT 2 cut(s) 96, 250
Hsp92I GRCGYC 1 cut(s) 959
Hsp92II CATG 3 cut(s) 266, 571, 958
HspAI GCGC 3 cut(s) 123, 938, 959
KasI GGCGCC 1 cut(s) 958
KpnI GGTACC 1 cut(s) 598
KspAI GTTAAC 1 cut(s) 151
Kzo9I GATC 9 cut(s) 16, 81, 177, 186, 355, 472, 769, 880, 1006
LguI GCTCTTC 1 cut(s) 148
LmnI GCTCC 2 cut(s) 235, 1037
Lsp1109I GCAGC 1 cut(s) 1081
LweI GCATC 1 cut(s) 205
MaeI CTAG 2 cut(s) 536, 588
MaeII ACGT 2 cut(s) 96, 250
MaeIII GTNAC 5 cut(s) 485, 524, 583, 623, 928
MalI GATC 9 cut(s) 18, 83, 179, 188, 357, 474, 771, 882, 1008
MboI GATC 9 cut(s) 16, 81, 177, 186, 355, 472, 769, 880, 1006
MboII GAAGA 8 cut(s) 135, 196, 248, 350, 369, 699, 779, 1034
MflI RGATCY 3 cut(s) 186, 472, 769
MhlI GDGCHC 3 cut(s) 240, 438, 604
MluCI AATT 2 cut(s) 30, 1055
Mly113I GGCGCC 1 cut(s) 959
MlyI GAGTC 1 cut(s) 220
MroXI GAANNNNTTC 2 cut(s) 939, 1074
MseI TTAA 8 cut(s) 150, 282, 318, 372, 515, 729, 741, 1058
MslI CAYNNNNRTG 1 cut(s) 267
MspI CCGG 3 cut(s) 483, 704, 857
MspR9I CCNGG 6 cut(s) 483, 704, 705, 831, 857, 858
Mva1269I GAATGC 1 cut(s) 505
MvaI CCWGG 1 cut(s) 831
MvnI CGCG 1 cut(s) 125
MwoI GCNNNNNNNGC 1 cut(s) 433
NarI GGCGCC 1 cut(s) 959
NciI CCSGG 5 cut(s) 483, 704, 705, 857, 858
NdeII GATC 9 cut(s) 16, 81, 177, 186, 355, 472, 769, 880, 1006
NheI GCTAGC 1 cut(s) 535
NlaIII CATG 3 cut(s) 266, 571, 958
NlaIV GGNNCC 3 cut(s) 596, 637, 960
NmeAIII GCCGAG 2 cut(s) 143, 700
NmuCI GTSAC 4 cut(s) 524, 583, 623, 928
NspV TTCGAA 1 cut(s) 914
PaeR7I CTCGAG 1 cut(s) 773
PagI TCATGA 1 cut(s) 567
PciSI GCTCTTC 1 cut(s) 148
PcsI WCGNNNNNNNCGW 1 cut(s) 256
PctI GAATGC 1 cut(s) 505
PdmI GAANNNNTTC 2 cut(s) 939, 1074
PfeI GAWTC 3 cut(s) 37, 812, 1075
Pfl23II CGTACG 1 cut(s) 126
PflMI CCANNNNNTGG 1 cut(s) 26
PkrI GCNGC 1 cut(s) 1096
PleI GAGTC 1 cut(s) 220
PluTI GGCGCC 1 cut(s) 962
PpsI GAGTC 1 cut(s) 220
Ppu21I YACGTR 1 cut(s) 97
PshBI ATTAAT 1 cut(s) 1058
Psp124BI GAGCTC 1 cut(s) 240
Psp6I CCWGG 1 cut(s) 829
PspEI GGTNACC 1 cut(s) 485
PspGI CCWGG 1 cut(s) 829
PspLI CGTACG 1 cut(s) 126
PspN4I GGNNCC 3 cut(s) 596, 637, 960
PstNI CAGNNNCTG 1 cut(s) 1094
PsuI RGATCY 3 cut(s) 186, 472, 769
RsaI GTAC 2 cut(s) 128, 596
RsaNI GTAC 2 cut(s) 127, 595
RseI CAYNNNNRTG 1 cut(s) 267
SacI GAGCTC 1 cut(s) 240
SapI GCTCTTC 1 cut(s) 148
SaqAI TTAA 8 cut(s) 150, 282, 318, 372, 515, 729, 741, 1058
SatI GCNGC 1 cut(s) 1095
Sau3AI GATC 9 cut(s) 16, 81, 177, 186, 355, 472, 769, 880, 1006
SchI GAGTC 1 cut(s) 220
ScrFI CCNGG 6 cut(s) 483, 704, 705, 831, 857, 858
SduI GDGCHC 3 cut(s) 240, 438, 604
SfaNI GCATC 1 cut(s) 205
SfoI GGCGCC 1 cut(s) 960
Sfr274I CTCGAG 1 cut(s) 773
SfuI TTCGAA 1 cut(s) 914
SlaI CTCGAG 1 cut(s) 773
SmaI CCCGGG 2 cut(s) 705, 858
SmiMI CAYNNNNRTG 1 cut(s) 267
SmlI CTYRAG 5 cut(s) 239, 381, 437, 773, 993
SmoI CTYRAG 5 cut(s) 239, 381, 437, 773, 993
Sse9I AATT 2 cut(s) 30, 1055
SspDI GGCGCC 1 cut(s) 958
SspMI CTAG 2 cut(s) 536, 588
SstI GAGCTC 1 cut(s) 240
StyD4I CCNGG 6 cut(s) 481, 702, 703, 829, 855, 856
TaaI ACNGT 1 cut(s) 131
TaiI ACGT 2 cut(s) 99, 253
TaqI TCGA 7 cut(s) 78, 84, 259, 430, 774, 914, 1011
TasI AATT 2 cut(s) 30, 1055
TfiI GAWTC 3 cut(s) 37, 812, 1075
Tru1I TTAA 8 cut(s) 150, 282, 318, 372, 515, 729, 741, 1058
Tru9I TTAA 8 cut(s) 150, 282, 318, 372, 515, 729, 741, 1058
TseFI GTSAC 4 cut(s) 524, 583, 623, 928
TseI GCWGC 1 cut(s) 1094
Tsp45I GTSAC 4 cut(s) 524, 583, 623, 928
TspDTI ATGAA 5 cut(s) 350, 437, 556, 1035, 1067
TspGWI ACGGA 1 cut(s) 947
TspMI CCCGGG 2 cut(s) 703, 856
Van91I CCANNNNNTGG 1 cut(s) 26
VspI ATTAAT 1 cut(s) 1058
XhoI CTCGAG 1 cut(s) 773
XmaI CCCGGG 2 cut(s) 703, 856
XmnI GAANNNNTTC 2 cut(s) 939, 1074
XspI CTAG 2 cut(s) 536, 588
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.