MD08G1025900.v1.1

mitogen-activated protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
Physical Location & Seq
Reverse (-)
1877129 .. 1879699
2571 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1025900.v1.1.491

Sequence Viewer

Length: 1059 bp
ATGTGGCAGACGCTGTTCGAGATCGACACCAAGTACGTGCCGATCAAGCCGATCGGGCGGGGAGCGTACGGCATCGTTTGCTCGTCGGTGAACAGGGAGACGAACGAGAAGGTGGCGATTAAGAAGATCAACAATGCGTTCGAGAACCGAGTCGACGCGTTGCGGACGCTGCGGGAGCTGAAGCTGCTGCAGCACCTCCGGCACGAGAACGTGATTGCCCTGAAGGATGTGATGATGCCGATTCAGAGGAAGAGCTTTAAAGACGTGTACTTGGTGTACGAGCTCATGGATACCGATCTCCACCAGATTATCAAGTCCTCGCAACCGCTTTCGAATGATCACTGTCAGTATTTCCTCTTTCAGCTGCTTCGAGGCCTAAAGTATCTCCATTCTGCAAACATTCTCCATCGTGATTTGAAGCCTGGAAACCTTCTTATCAACGCAAACTGTGACTTAAAAATATGTGATTTTGGGCTAGCGCGCACCAGCACGGGAAAGGACCAGTTCATGACCGAGTATGTTGTCACTCGTTGGTACCGTGCCCCTGAGCTCCTGCTCTGCTGTGACAACTATGGAACGTCGATTGATGTGTGGTCTGTTGGGTGCATCTTTGCTGAGCTTCTTGGCCGGAAACCCATCTTCCCTGGTACAGAATGCCTCAACCAGCTCAAACTCATAGTTAACATCCTTGGCAGCCAGAGGGAGGAGGATCTCCAATTTATAGACAATCCTAAGGCGACGAAATACATAAAATCGCTGCCCTTTTCTCTGGGGACCCCCTTAACCCGCCTTTACCCTGATGCTCATCCTCTAGCAATTGATCTACTGCAAAAGATGCTTGTTTTTGATCCATCAAAGAGGATTAGCGTCACTGAAGCACTCCAACACCCATACATGGCCCCATTGTATGATCCTAGTAATAACCCTCCAGCCGAGGTACCTATTGATCTCGACATAGACGAGGATTTAGGAGAAGAGACGATAAGGGAGATGATGTGGAGGGAAATGCTTCTTTACCATCCCGAAGCTGCTACAGACAATGCCGCAGTGTTTTCCTGA

Protein Analysis

353

Amino Acids

40.42

Weight (kDa)

5.89

Isoelectric Point (pI)

32.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 13 - 299 3.5e-70 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 16 - 209 8.1e-32 Protein tyrosine and serine/threonine kinase
Kdo PF06293 36 - 151 4.3e-07 Lipopolysaccharide kinase (Kdo/WaaP) family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0013920)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G10210 AT1G10210 AT1G10210 AT1G59580 AT1G59580
fragaria_vesca FvH4_2g39360
malus_domestica MD08G1025900.v1.1 MD15G1022600.v1.1
prunus_persica Prupe.1G374600_v2.0.a1
rosa_chinensis RchiOBHm_Chr6g0301651
rosa_laevigata RLG00000011236
rosa_multiflora Rmu_ssc0000452.1_g000018
rosa_roxburghii Rroxscaffold_7G00166570
rosa_rugosa Rorug06G0307600
rosa_samantha Rh6AG420400 Rh6CG433400
rosa_wichuraiana Rw6G036350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 2 cut(s) 534, 937
AccB1I GGYRCC 2 cut(s) 534, 937
AccI GTMKAC 1 cut(s) 153
AccII CGCG 2 cut(s) 158, 481
AciI CCGC 6 cut(s) 58, 163, 172, 326, 787, 1044
AclWI GGATC 3 cut(s) 717, 842, 905
AcoI YGGCCR 1 cut(s) 625
AcuI CTGAAG 3 cut(s) 200, 242, 894
AfaI GTAC 7 cut(s) 35, 68, 269, 278, 536, 649, 939
AfiI CCNNNNNNNGG 2 cut(s) 703, 895
AflIII ACRYGT 2 cut(s) 156, 264
AgsI TTSAA 1 cut(s) 418
AjiI CACGTC 1 cut(s) 265
AjnI CCWGG 2 cut(s) 421, 643
AluBI AGCT 9 cut(s) 178, 184, 255, 283, 364, 550, 619, 667, 1028
AluI AGCT 9 cut(s) 178, 184, 255, 283, 364, 550, 619, 667, 1028
Alw21I GWGCWC 2 cut(s) 285, 552
Alw26I GTCTC 2 cut(s) 92, 971
AlwI GGATC 3 cut(s) 717, 842, 905
AlwNI CAGNNNCTG 1 cut(s) 13
AoxI GGCC 3 cut(s) 373, 625, 897
ApeKI GCWGC 8 cut(s) 169, 184, 187, 190, 364, 693, 757, 1028
Asp700I GAANNNNTTC 1 cut(s) 1008
Asp718I GGTACC 2 cut(s) 534, 937
AspLEI GCGC 2 cut(s) 481, 483
AspS9I GGNCC 3 cut(s) 499, 774, 898
AsuHPI GGTGA 1 cut(s) 100
AsuII TTCGAA 1 cut(s) 332
AsuNHI GCTAGC 1 cut(s) 475
AvaII GGWCC 2 cut(s) 499, 774
AxyI CCTNAGG 1 cut(s) 732
BaeGI GKGCMC 1 cut(s) 544
BanI GGYRCC 2 cut(s) 534, 937
BanII GRGCYC 2 cut(s) 285, 552
BauI CACGAG 1 cut(s) 203
Bbv12I GWGCWC 2 cut(s) 285, 552
BbvI GCAGC 8 cut(s) 156, 171, 174, 202, 351, 705, 744, 1015
BccI CCATC 4 cut(s) 414, 644, 859, 1026
BceAI ACGGC 1 cut(s) 85
BciT130I CCWGG 2 cut(s) 423, 645
BciVI GTATCC 1 cut(s) 283
BclI TGATCA 1 cut(s) 337
BcoDI GTCTC 2 cut(s) 92, 971
BfaI CTAG 3 cut(s) 476, 812, 915
BfmI CTRYAG 2 cut(s) 188, 1032
BfuI GTATCC 1 cut(s) 283
BglI GCCNNNNNGGC 1 cut(s) 55
BisI GCNGC 9 cut(s) 170, 185, 188, 191, 365, 694, 758, 1029, 1044
BlpI GCTNAGC 1 cut(s) 615
BlsI GCNGC 9 cut(s) 171, 186, 189, 192, 366, 695, 759, 1030, 1045
Bme1390I CCNGG 2 cut(s) 423, 645
Bme18I GGWCC 2 cut(s) 499, 774
BmgBI CACGTC 1 cut(s) 265
BmgT120I GGNCC 3 cut(s) 499, 774, 898
BmiI GGNNCC 5 cut(s) 536, 775, 776, 900, 939
BmrFI CCNGG 2 cut(s) 423, 645
BmsI GCATC 5 cut(s) 81, 225, 615, 790, 825
BmtI GCTAGC 1 cut(s) 479
BpmI CTGGAG 1 cut(s) 912
Bpu10I CCTNAGC 1 cut(s) 546
Bpu1102I GCTNAGC 1 cut(s) 615
Bpu14I TTCGAA 1 cut(s) 332
BsaAI YACGTR 1 cut(s) 37
BsaBI GATNNNNATC 2 cut(s) 294, 804
BsaJI CCNNGG 3 cut(s) 643, 688, 933
BsaXI ACNNNNNCTCC 2 cut(s) 980, 1010
Bsc4I CCNNNNNNNGG 2 cut(s) 703, 895
Bse1I ACTGG 1 cut(s) 502
Bse21I CCTNAGG 1 cut(s) 732
Bse8I GATNNNNATC 2 cut(s) 294, 804
BseBI CCWGG 2 cut(s) 423, 645
BseDI CCNNGG 3 cut(s) 643, 688, 933
BseGI GGATG 4 cut(s) 232, 684, 805, 1018
BseJI GATNNNNATC 2 cut(s) 294, 804
BseLI CCNNNNNNNGG 2 cut(s) 703, 895
BseMII CTCAG 2 cut(s) 537, 606
BseNI ACTGG 1 cut(s) 502
BsePI GCGCGC 1 cut(s) 479
BseRI GAGGAG 1 cut(s) 719
BseSI GKGCMC 1 cut(s) 544
BseXI GCAGC 8 cut(s) 156, 171, 174, 202, 351, 705, 744, 1015
Bsh1236I CGCG 2 cut(s) 158, 481
Bsh1285I CGRYCG 1 cut(s) 54
BshFI GGCC 3 cut(s) 375, 627, 899
BshNI GGYRCC 2 cut(s) 534, 937
BsiEI CGRYCG 1 cut(s) 54
BsiHKAI GWGCWC 2 cut(s) 285, 552
BsiSI CCGG 2 cut(s) 199, 628
BsiWI CGTACG 1 cut(s) 66
BslFI GGGAC 1 cut(s) 787
BslI CCNNNNNNNGG 2 cut(s) 703, 895
BsmAI GTCTC 2 cut(s) 92, 971
BsmBI CGTCTC 2 cut(s) 92, 971
BsmFI GGGAC 1 cut(s) 787
BsmI GAATGC 1 cut(s) 659
BsnI GGCC 3 cut(s) 375, 627, 899
Bsp119I TTCGAA 1 cut(s) 332
Bsp1286I GDGCHC 3 cut(s) 285, 544, 552
Bsp1720I GCTNAGC 1 cut(s) 615
BspACI CCGC 6 cut(s) 58, 163, 172, 326, 787, 1044
BspANI GGCC 3 cut(s) 375, 627, 899
BspCNI CTCAG 2 cut(s) 538, 607
BspFNI CGCG 2 cut(s) 158, 481
BspHI TCATGA 1 cut(s) 507
BspLI GGNNCC 5 cut(s) 536, 775, 776, 900, 939
BspMAI CTGCAG 1 cut(s) 192
BspOI GCTAGC 1 cut(s) 479
BspPI GGATC 3 cut(s) 717, 842, 905
BspQI GCTCTTC 1 cut(s) 245
BspT104I TTCGAA 1 cut(s) 332
BspT107I GGYRCC 2 cut(s) 534, 937
BsrI ACTGG 1 cut(s) 502
BssECI CCNNGG 3 cut(s) 643, 688, 933
BssHII GCGCGC 1 cut(s) 479
BssSI CACGAG 1 cut(s) 203
BssT1I CCWWGG 1 cut(s) 688
Bst2BI CACGAG 1 cut(s) 203
Bst2UI CCWGG 2 cut(s) 423, 645
Bst4CI ACNGT 3 cut(s) 344, 449, 539
Bst6I CTCTTC 2 cut(s) 245, 969
BstAPI GCANNNNNTGC 2 cut(s) 78, 835
BstBAI YACGTR 1 cut(s) 37
BstBI TTCGAA 1 cut(s) 332
BstC8I GCNNGC 2 cut(s) 477, 481
BstDEI CTNAG 3 cut(s) 546, 615, 732
BstF5I GGATG 4 cut(s) 232, 684, 805, 1018
BstFNI CGCG 2 cut(s) 158, 481
BstHHI GCGC 2 cut(s) 481, 483
BstMAI GTCTC 2 cut(s) 92, 971
BstMCI CGRYCG 1 cut(s) 54
BstMWI GCNNNNNNNGC 9 cut(s) 46, 55, 78, 169, 175, 184, 190, 199, 835
BstNI CCWGG 2 cut(s) 423, 645
BstSCI CCNGG 2 cut(s) 421, 643
BstSFI CTRYAG 2 cut(s) 188, 1032
BstSLI GKGCMC 1 cut(s) 544
BstUI CGCG 2 cut(s) 158, 481
BstV1I GCAGC 8 cut(s) 156, 171, 174, 202, 351, 705, 744, 1015
BstX2I RGATCY 1 cut(s) 709
BstYI RGATCY 1 cut(s) 709
Bsu36I CCTNAGG 1 cut(s) 732
BsuI GTATCC 1 cut(s) 283
BsuRI GGCC 3 cut(s) 375, 627, 899
BtrI CACGTC 1 cut(s) 265
BtsCI GGATG 4 cut(s) 232, 684, 805, 1018
BtsI GCAGTG 1 cut(s) 1053
BtsIMutI CAGTG 3 cut(s) 340, 870, 1053
Cac8I GCNNGC 2 cut(s) 477, 481
CaiI CAGNNNCTG 1 cut(s) 13
CciI TCATGA 1 cut(s) 507
CfoI GCGC 2 cut(s) 481, 483
Cfr13I GGNCC 3 cut(s) 499, 774, 898
CseI GACGC 4 cut(s) 19, 164, 175, 856
Csp6I GTAC 7 cut(s) 34, 67, 268, 277, 535, 648, 938
CviAII CATG 3 cut(s) 286, 508, 895
CviQI GTAC 7 cut(s) 34, 67, 268, 277, 535, 648, 938
DdeI CTNAG 3 cut(s) 546, 615, 732
DraI TTTAAA 1 cut(s) 259
EaeI YGGCCR 1 cut(s) 625
Eam1104I CTCTTC 2 cut(s) 245, 969
EarI CTCTTC 2 cut(s) 245, 969
Ecl136II GAGCTC 2 cut(s) 283, 550
Eco130I CCWWGG 1 cut(s) 688
Eco147I AGGCCT 1 cut(s) 375
Eco24I GRGCYC 2 cut(s) 285, 552
Eco47I GGWCC 2 cut(s) 499, 774
Eco53kI GAGCTC 2 cut(s) 283, 550
Eco57I CTGAAG 3 cut(s) 200, 242, 894
Eco81I CCTNAGG 1 cut(s) 732
EcoICRI GAGCTC 2 cut(s) 283, 550
EcoO109I RGGNCCY 1 cut(s) 774
EcoRII CCWGG 2 cut(s) 421, 643
EcoT14I CCWWGG 1 cut(s) 688
EcoT38I GRGCYC 2 cut(s) 285, 552
ErhI CCWWGG 1 cut(s) 688
Esp3I CGTCTC 2 cut(s) 92, 971
FaeI CATG 3 cut(s) 289, 511, 898
FaqI GGGAC 1 cut(s) 787
FatI CATG 3 cut(s) 285, 507, 894
FauI CCCGC 3 cut(s) 51, 165, 794
FbaI TGATCA 1 cut(s) 337
FblI GTMKAC 1 cut(s) 153
Fnu4HI GCNGC 9 cut(s) 170, 185, 188, 191, 365, 694, 758, 1029, 1044
FokI GGATG 4 cut(s) 239, 671, 792, 1005
FriOI GRGCYC 2 cut(s) 285, 552
Fsp4HI GCNGC 9 cut(s) 170, 185, 188, 191, 365, 694, 758, 1029, 1044
FspBI CTAG 3 cut(s) 476, 812, 915
GlaI GCGC 2 cut(s) 480, 482
GluI GCNGC 9 cut(s) 170, 185, 188, 191, 365, 694, 758, 1029, 1044
GsuI CTGGAG 1 cut(s) 912
HaeIII GGCC 3 cut(s) 375, 627, 899
HapII CCGG 2 cut(s) 199, 628
HgaI GACGC 4 cut(s) 19, 164, 175, 856
HhaI GCGC 2 cut(s) 481, 483
Hin1II CATG 3 cut(s) 289, 511, 898
Hin6I GCGC 2 cut(s) 479, 481
HinP1I GCGC 2 cut(s) 479, 481
HincII GTYRAC 2 cut(s) 154, 682
HindII GTYRAC 2 cut(s) 154, 682
HinfI GANTC 2 cut(s) 150, 241
HpaI GTTAAC 1 cut(s) 682
HpaII CCGG 2 cut(s) 199, 628
HphI GGTGA 1 cut(s) 100
Hpy166II GTNNAC 5 cut(s) 91, 154, 268, 277, 682
Hpy188I TCNGA 1 cut(s) 246
Hpy188III TCNNGA 7 cut(s) 19, 142, 410, 508, 950, 1022, 1056
Hpy8I GTNNAC 5 cut(s) 91, 154, 268, 277, 682
Hpy99I CGWCG 4 cut(s) 88, 158, 583, 742
HpyAV CCTTC 3 cut(s) 103, 217, 440
HpyCH4III ACNGT 3 cut(s) 344, 449, 539
HpyCH4IV ACGT 4 cut(s) 36, 210, 264, 578
HpyCH4V TGCA 4 cut(s) 190, 395, 606, 829
HpyF10VI GCNNNNNNNGC 9 cut(s) 46, 55, 78, 169, 175, 184, 190, 199, 835
HpyF3I CTNAG 3 cut(s) 546, 615, 732
HpySE526I ACGT 4 cut(s) 36, 210, 264, 578
Hsp92II CATG 3 cut(s) 289, 511, 898
HspAI GCGC 2 cut(s) 479, 481
KflI GGGWCCC 1 cut(s) 774
KpnI GGTACC 2 cut(s) 538, 941
Ksp22I TGATCA 1 cut(s) 337
KspAI GTTAAC 1 cut(s) 682
LguI GCTCTTC 1 cut(s) 245
LmnI GCTCC 3 cut(s) 62, 175, 555
Lsp1109I GCAGC 8 cut(s) 156, 171, 174, 202, 351, 705, 744, 1015
LweI GCATC 5 cut(s) 81, 225, 615, 790, 825
MaeI CTAG 3 cut(s) 476, 812, 915
MaeII ACGT 4 cut(s) 36, 210, 264, 578
MaeIII GTNAC 4 cut(s) 449, 523, 563, 868
MboII GAAGA 4 cut(s) 136, 262, 631, 986
MfeI CAATTG 1 cut(s) 816
MflI RGATCY 1 cut(s) 709
MhlI GDGCHC 3 cut(s) 285, 544, 552
MluCI AATT 2 cut(s) 716, 816
MluI ACGCGT 1 cut(s) 156
MlyI GAGTC 1 cut(s) 159
MmeI TCCRAC 1 cut(s) 907
MroXI GAANNNNTTC 1 cut(s) 1008
MseI TTAA 5 cut(s) 120, 258, 455, 681, 782
MspA1I CMGCKG 1 cut(s) 364
MspI CCGG 2 cut(s) 199, 628
MspR9I CCNGG 2 cut(s) 423, 645
MunI CAATTG 1 cut(s) 816
Mva1269I GAATGC 1 cut(s) 659
MvaI CCWGG 2 cut(s) 423, 645
MvnI CGCG 2 cut(s) 158, 481
MwoI GCNNNNNNNGC 9 cut(s) 46, 55, 78, 169, 175, 184, 190, 199, 835
NheI GCTAGC 1 cut(s) 475
NlaIII CATG 3 cut(s) 289, 511, 898
NlaIV GGNNCC 5 cut(s) 536, 775, 776, 900, 939
NmeAIII GCCGAG 1 cut(s) 958
NmuCI GTSAC 4 cut(s) 449, 523, 563, 868
NspV TTCGAA 1 cut(s) 332
PagI TCATGA 1 cut(s) 507
PauI GCGCGC 1 cut(s) 479
PceI AGGCCT 1 cut(s) 375
PciSI GCTCTTC 1 cut(s) 245
PcsI WCGNNNNNNNCGW 2 cut(s) 535, 957
PctI GAATGC 1 cut(s) 659
PdmI GAANNNNTTC 1 cut(s) 1008
PfeI GAWTC 1 cut(s) 241
Pfl23II CGTACG 1 cut(s) 66
PkrI GCNGC 9 cut(s) 171, 186, 189, 192, 366, 695, 759, 1030, 1045
Ple19I CGATCG 1 cut(s) 54
PleI GAGTC 1 cut(s) 158
PpsI GAGTC 1 cut(s) 158
Ppu21I YACGTR 1 cut(s) 37
PpuMI RGGWCCY 1 cut(s) 774
Psp124BI GAGCTC 2 cut(s) 285, 552
Psp5II RGGWCCY 1 cut(s) 774
Psp6I CCWGG 2 cut(s) 421, 643
PspGI CCWGG 2 cut(s) 421, 643
PspLI CGTACG 1 cut(s) 66
PspN4I GGNNCC 5 cut(s) 536, 775, 776, 900, 939
PspPI GGNCC 3 cut(s) 499, 774, 898
PspPPI RGGWCCY 1 cut(s) 774
PstI CTGCAG 1 cut(s) 192
PstNI CAGNNNCTG 1 cut(s) 13
PsuI RGATCY 1 cut(s) 709
PteI GCGCGC 1 cut(s) 479
PvuI CGATCG 1 cut(s) 54
PvuII CAGCTG 1 cut(s) 364
RsaI GTAC 7 cut(s) 35, 68, 269, 278, 536, 649, 939
RsaNI GTAC 7 cut(s) 34, 67, 268, 277, 535, 648, 938
SacI GAGCTC 2 cut(s) 285, 552
SalI GTCGAC 1 cut(s) 152
SapI GCTCTTC 1 cut(s) 245
SaqAI TTAA 5 cut(s) 120, 258, 455, 681, 782
SatI GCNGC 9 cut(s) 170, 185, 188, 191, 365, 694, 758, 1029, 1044
Sau96I GGNCC 3 cut(s) 499, 774, 898
SchI GAGTC 1 cut(s) 159
ScrFI CCNGG 2 cut(s) 423, 645
SduI GDGCHC 3 cut(s) 285, 544, 552
SfaNI GCATC 5 cut(s) 81, 225, 615, 790, 825
SfcI CTRYAG 2 cut(s) 188, 1032
SfuI TTCGAA 1 cut(s) 332
SinI GGWCC 2 cut(s) 499, 774
Sse9I AATT 2 cut(s) 716, 816
SseBI AGGCCT 1 cut(s) 375
SsiI CCGC 6 cut(s) 58, 163, 172, 326, 787, 1044
SspMI CTAG 3 cut(s) 476, 812, 915
SstI GAGCTC 2 cut(s) 285, 552
StuI AGGCCT 1 cut(s) 375
StyD4I CCNGG 2 cut(s) 421, 643
StyI CCWWGG 1 cut(s) 688
TaaI ACNGT 3 cut(s) 344, 449, 539
TaiI ACGT 4 cut(s) 39, 213, 267, 581
TaqI TCGA 8 cut(s) 18, 24, 141, 153, 332, 370, 581, 951
TaqII GACCGA 1 cut(s) 527
TasI AATT 2 cut(s) 716, 816
TatI WGTACW 1 cut(s) 267
TauI GCSGC 1 cut(s) 1046
TfiI GAWTC 1 cut(s) 241
Tru1I TTAA 5 cut(s) 120, 258, 455, 681, 782
Tru9I TTAA 5 cut(s) 120, 258, 455, 681, 782
TscAI CASTG 3 cut(s) 347, 877, 1053
TseFI GTSAC 4 cut(s) 449, 523, 563, 868
TseI GCWGC 8 cut(s) 169, 184, 187, 190, 364, 693, 757, 1028
Tsp45I GTSAC 4 cut(s) 449, 523, 563, 868
TspDTI ATGAA 1 cut(s) 496
TspRI CASTG 3 cut(s) 347, 877, 1053
VpaK11BI GGWCC 2 cut(s) 499, 774
XmiI GTMKAC 1 cut(s) 153
XmnI GAANNNNTTC 1 cut(s) 1008
XspI CTAG 3 cut(s) 476, 812, 915
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.