AT1G15125

S-adenosylmethionine-dependent methyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0020132
Physical Location & Seq
Forward (+)
5204312 .. 5205964
1653 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G15125.1

Sequence Viewer

Length: 1056 bp
ATGAACGGTGGAGACGGTGCTTCTAGCTATGCTCGCAACTCTTCCTATCAGAGGGGAGCCATTGAGGCTGCGGAAGCACTCCTCAGGAACGAGATCAACGCACGGCTCGACATCACTAACCATTCCTTTTCATCTTTTACAATCGCAGACTTTGGTTGCTCCTCCGGCCCCAACACCGTAATTGCTGTCGACATCATCATCCAAGCCCTCTACCACAAGTTCACCTCTTCTCTGCCTAATACTACAACTCCTCAGTTTCAAGTCTTCTTCAACGACGTCTCCCACACTGATTTCAATGCACTCTTTGCTTTGCTCCCTCCACAACGCCCCTACTTCGTTGCAGGTGTCCCCGGTTCCTTTTATGGAAACTTGTTTCCAAAGGCACATCTCAACTTGGCCTACTCCTCTTGCGCCCTCTGCTGGCTCTCCGACTTGCCATCCGAGCTAACTGATACAAGCTCTCCTGCTTACAACAGAGGCAGGATTCACTACACGGGAGCATCAGCAGAGGTTGCACAAGCTTACTCCTCTCAGTACAAGAAGGATATCAAGTTGTTTTTGCATGCTAGGTCACAGGAGCTCGCAGAAAACGGGTTGATGGCACTGATTGTGCCCGGTGTACCAGATGGTTTTCTCGATTGTCAGGAGGCTTCAACGGGATCCGAGTTCGATCTGTTGGGTTCATGCCTCATGGACATGGCCAAAGAGGGAATAATAGAGGAGGAGGAGGTGAACAGTTTCAACCTTCCCATATATTACACAACTCCAAAGGAACTGGAAGACATCATCAGAAGCAACGGAGAGTTGAAAATTGATAAAATGGAGACACTGGGGAGCATGGACGCACAAGACACTATGCCTGACCTCGAGTCAAGGGTTCTGTACCTGAGAGCTGTGCTGGAAGGTCTAGTTCGTACCCACTTTGGCCACCAAATCCTCGACGACCTGTTTGATCGCTACGCCCTCAAACTTGCTCATTCCTCTTTCATCCTTCAGCCTCAAACCCACAAATCCATCATGATCTTTGCCCTTCTCAGTCGCTGTCATGACATCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Methyltransf_7

Protein Analysis

351

Amino Acids

38.85

Weight (kDa)

4.97

Isoelectric Point (pI)

45.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Methyltransf_7 PF03492 36 - 347 8.2e-98 SAM dependent carboxyl methyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0020132)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G15125 AT1G15125
malus_domestica MD15G1116500.v1.1
prunus_persica Prupe.1G321300_v2.0.a1
pyrus_communis pycom15g10500 pycom15g10510

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 332
AatII GACGTC 1 cut(s) 279
Acc36I ACCTGC 1 cut(s) 332
AccI GTMKAC 1 cut(s) 189
AciI CCGC 1 cut(s) 71
AclWI GGATC 2 cut(s) 654, 667
AcoI YGGCCR 2 cut(s) 699, 925
AcuI CTGAAG 1 cut(s) 977
AcyI GRCGYC 1 cut(s) 276
AfaI GTAC 4 cut(s) 536, 621, 884, 916
AfiI CCNNNNNNNGG 2 cut(s) 51, 420
AgsI TTSAA 6 cut(s) 260, 271, 295, 654, 742, 808
AhdI GACNNNNNGTC 1 cut(s) 868
AluBI AGCT 6 cut(s) 27, 445, 459, 521, 580, 893
AluI AGCT 6 cut(s) 27, 445, 459, 521, 580, 893
Alw21I GWGCWC 1 cut(s) 582
Alw26I GTCTC 3 cut(s) 6, 283, 818
AlwI GGATC 2 cut(s) 654, 667
AlwNI CAGNNNCTG 1 cut(s) 1041
Ama87I CYCGRG 1 cut(s) 866
AoxI GGCC 4 cut(s) 166, 396, 699, 925
ApeKI GCWGC 1 cut(s) 68
ArsI GACNNNNNNTTYG 2 cut(s) 932, 964
Asp700I GAANNNNTTC 1 cut(s) 737
AspLEI GCGC 1 cut(s) 413
AspS9I GGNCC 1 cut(s) 167
AsuC2I CCSGG 2 cut(s) 351, 615
AsuHPI GGTGA 2 cut(s) 214, 742
AvaI CYCGRG 1 cut(s) 866
AxyI CCTNAGG 1 cut(s) 83
BaeGI GKGCMC 1 cut(s) 615
BalI TGGCCA 2 cut(s) 701, 927
BamHI GGATCC 1 cut(s) 659
BanII GRGCYC 1 cut(s) 582
BbsI GAAGAC 2 cut(s) 256, 786
Bbv12I GWGCWC 1 cut(s) 582
BbvI GCAGC 1 cut(s) 55
BccI CCATC 4 cut(s) 445, 592, 620, 1022
BceAI ACGGC 1 cut(s) 119
BcnI CCSGG 2 cut(s) 351, 615
BcoDI GTCTC 3 cut(s) 6, 283, 818
BfaI CTAG 3 cut(s) 24, 567, 908
BfuAI ACCTGC 1 cut(s) 332
BglI GCCNNNNNGGC 1 cut(s) 65
BisI GCNGC 1 cut(s) 69
BlsI GCNGC 1 cut(s) 70
Bme1390I CCNGG 2 cut(s) 351, 615
BmeRI GACNNNNNGTC 1 cut(s) 868
BmeT110I CYCGRG 1 cut(s) 866
BmgT120I GGNCC 1 cut(s) 167
BmiI GGNNCC 4 cut(s) 58, 169, 355, 661
BmrFI CCNGG 2 cut(s) 351, 615
BmrI ACTGGG 1 cut(s) 839
BmsI GCATC 1 cut(s) 509
BmuI ACTGGG 1 cut(s) 839
BpiI GAAGAC 2 cut(s) 256, 786
BpuMI CCSGG 2 cut(s) 351, 615
BsaHI GRCGYC 1 cut(s) 276
BsaJI CCNNGG 1 cut(s) 349
BsaXI ACNNNNNCTCC 6 cut(s) 232, 262, 263, 293, 445, 475
Bsc4I CCNNNNNNNGG 2 cut(s) 51, 420
Bse1I ACTGG 2 cut(s) 780, 834
Bse21I CCTNAGG 1 cut(s) 83
BseDI CCNNGG 1 cut(s) 349
BseGI GGATG 3 cut(s) 198, 437, 987
BseLI CCNNNNNNNGG 2 cut(s) 51, 420
BseMII CTCAG 5 cut(s) 97, 266, 545, 878, 1048
BseNI ACTGG 2 cut(s) 780, 834
BseRI GAGGAG 8 cut(s) 71, 151, 240, 394, 517, 734, 737, 740
BseSI GKGCMC 1 cut(s) 615
BseXI GCAGC 1 cut(s) 55
BshFI GGCC 4 cut(s) 168, 398, 701, 927
BsiHKAI GWGCWC 1 cut(s) 582
BsiHKCI CYCGRG 1 cut(s) 866
BsiSI CCGG 3 cut(s) 165, 351, 615
BslFI GGGAC 1 cut(s) 332
BslI CCNNNNNNNGG 2 cut(s) 51, 420
BsmAI GTCTC 3 cut(s) 6, 283, 818
BsmBI CGTCTC 2 cut(s) 6, 283
BsmFI GGGAC 1 cut(s) 332
BsnI GGCC 4 cut(s) 168, 398, 701, 927
BsoBI CYCGRG 1 cut(s) 866
Bsp1286I GDGCHC 2 cut(s) 582, 615
Bsp143I GATC 5 cut(s) 93, 659, 670, 952, 1020
BspACI CCGC 1 cut(s) 71
BspANI GGCC 4 cut(s) 168, 398, 701, 927
BspCNI CTCAG 5 cut(s) 96, 265, 544, 879, 1047
BspHI TCATGA 2 cut(s) 1017, 1045
BspLI GGNNCC 4 cut(s) 58, 169, 355, 661
BspMI ACCTGC 1 cut(s) 332
BspPI GGATC 2 cut(s) 654, 667
BsrI ACTGG 2 cut(s) 780, 834
BssECI CCNNGG 1 cut(s) 349
BssMI GATC 5 cut(s) 93, 659, 670, 952, 1020
BssNI GRCGYC 1 cut(s) 276
Bst4CI ACNGT 4 cut(s) 8, 17, 178, 737
Bst6I CTCTTC 2 cut(s) 46, 232
BstACI GRCGYC 1 cut(s) 276
BstAPI GCANNNNNTGC 2 cut(s) 305, 512
BstC8I GCNNGC 4 cut(s) 34, 422, 564, 582
BstDEI CTNAG 5 cut(s) 83, 252, 531, 887, 1034
BstENI CCTNNNNNAGG 1 cut(s) 49
BstF5I GGATG 3 cut(s) 198, 437, 987
BstHHI GCGC 1 cut(s) 413
BstKTI GATC 5 cut(s) 96, 662, 673, 955, 1023
BstMAI GTCTC 3 cut(s) 6, 283, 818
BstMBI GATC 5 cut(s) 93, 659, 670, 952, 1020
BstMWI GCNNNNNNNGC 8 cut(s) 33, 65, 74, 165, 305, 417, 442, 512
BstNSI RCATGY 1 cut(s) 566
BstSCI CCNGG 2 cut(s) 349, 613
BstSLI GKGCMC 1 cut(s) 615
BstV1I GCAGC 1 cut(s) 55
BstV2I GAAGAC 2 cut(s) 256, 786
BstX2I RGATCY 1 cut(s) 659
BstYI RGATCY 1 cut(s) 659
Bsu36I CCTNAGG 1 cut(s) 83
BsuRI GGCC 4 cut(s) 168, 398, 701, 927
BtsCI GGATG 3 cut(s) 198, 437, 987
BtsIMutI CAGTG 3 cut(s) 285, 602, 827
BveI ACCTGC 1 cut(s) 332
Cac8I GCNNGC 4 cut(s) 34, 422, 564, 582
CaiI CAGNNNCTG 1 cut(s) 1041
CciI TCATGA 2 cut(s) 1017, 1045
CfoI GCGC 1 cut(s) 413
Cfr13I GGNCC 1 cut(s) 167
CseI GACGC 1 cut(s) 851
Csp6I GTAC 4 cut(s) 535, 620, 883, 915
CviAII CATG 7 cut(s) 563, 684, 691, 697, 838, 1018, 1046
CviQI GTAC 4 cut(s) 535, 620, 883, 915
DdeI CTNAG 5 cut(s) 83, 252, 531, 887, 1034
DpnI GATC 5 cut(s) 95, 661, 672, 954, 1022
DpnII GATC 5 cut(s) 93, 659, 670, 952, 1020
DriI GACNNNNNGTC 1 cut(s) 868
EaeI YGGCCR 2 cut(s) 699, 925
Eam1104I CTCTTC 2 cut(s) 46, 232
Eam1105I GACNNNNNGTC 1 cut(s) 868
EarI CTCTTC 2 cut(s) 46, 232
Ecl136II GAGCTC 1 cut(s) 580
Eco24I GRGCYC 1 cut(s) 582
Eco32I GATATC 1 cut(s) 547
Eco53kI GAGCTC 1 cut(s) 580
Eco57I CTGAAG 1 cut(s) 977
Eco81I CCTNAGG 1 cut(s) 83
Eco88I CYCGRG 1 cut(s) 866
EcoICRI GAGCTC 1 cut(s) 580
EcoNI CCTNNNNNAGG 1 cut(s) 49
EcoRV GATATC 1 cut(s) 547
EcoT38I GRGCYC 1 cut(s) 582
Esp3I CGTCTC 2 cut(s) 6, 283
FaeI CATG 7 cut(s) 566, 687, 694, 700, 841, 1021, 1049
FaqI GGGAC 1 cut(s) 332
FatI CATG 7 cut(s) 562, 683, 690, 696, 837, 1017, 1045
FblI GTMKAC 1 cut(s) 189
Fnu4HI GCNGC 1 cut(s) 69
FokI GGATG 3 cut(s) 185, 424, 974
FriOI GRGCYC 1 cut(s) 582
Fsp4HI GCNGC 1 cut(s) 69
FspBI CTAG 3 cut(s) 24, 567, 908
GlaI GCGC 1 cut(s) 412
GluI GCNGC 1 cut(s) 69
HaeIII GGCC 4 cut(s) 168, 398, 701, 927
HapII CCGG 3 cut(s) 165, 351, 615
HgaI GACGC 1 cut(s) 851
HhaI GCGC 1 cut(s) 413
Hin1I GRCGYC 1 cut(s) 276
Hin1II CATG 7 cut(s) 566, 687, 694, 700, 841, 1021, 1049
Hin6I GCGC 1 cut(s) 411
HinP1I GCGC 1 cut(s) 411
HincII GTYRAC 1 cut(s) 190
HindII GTYRAC 1 cut(s) 190
HindIII AAGCTT 1 cut(s) 519
HinfI GANTC 2 cut(s) 484, 869
HpaII CCGG 3 cut(s) 165, 351, 615
HphI GGTGA 2 cut(s) 214, 742
Hpy166II GTNNAC 4 cut(s) 190, 222, 620, 733
Hpy188I TCNGA 6 cut(s) 51, 430, 442, 664, 791, 1055
Hpy188III TCNNGA 5 cut(s) 85, 635, 644, 1018, 1046
Hpy8I GTNNAC 4 cut(s) 190, 222, 620, 733
Hpy99I CGWCG 2 cut(s) 278, 944
HpyAV CCTTC 5 cut(s) 535, 755, 896, 1001, 1040
HpyCH4III ACNGT 4 cut(s) 8, 17, 178, 737
HpyCH4IV ACGT 1 cut(s) 276
HpyCH4V TGCA 4 cut(s) 299, 341, 515, 562
HpyF10VI GCNNNNNNNGC 8 cut(s) 33, 65, 74, 165, 305, 417, 442, 512
HpyF3I CTNAG 5 cut(s) 83, 252, 531, 887, 1034
HpySE526I ACGT 1 cut(s) 276
Hsp92I GRCGYC 1 cut(s) 276
Hsp92II CATG 7 cut(s) 566, 687, 694, 700, 841, 1021, 1049
HspAI GCGC 1 cut(s) 411
Kzo9I GATC 5 cut(s) 93, 659, 670, 952, 1020
LmnI GCTCC 6 cut(s) 56, 164, 318, 497, 577, 834
Lsp1109I GCAGC 1 cut(s) 55
LweI GCATC 1 cut(s) 509
MaeI CTAG 3 cut(s) 24, 567, 908
MaeII ACGT 1 cut(s) 276
MaeIII GTNAC 1 cut(s) 570
MalI GATC 5 cut(s) 95, 661, 672, 954, 1022
MboI GATC 5 cut(s) 93, 659, 670, 952, 1020
MboII GAAGA 5 cut(s) 33, 219, 256, 259, 791
MflI RGATCY 1 cut(s) 659
MhlI GDGCHC 2 cut(s) 582, 615
MlsI TGGCCA 2 cut(s) 701, 927
MluCI AATT 2 cut(s) 180, 810
MluNI TGGCCA 2 cut(s) 701, 927
MlyI GAGTC 1 cut(s) 878
MmeI TCCRAC 1 cut(s) 453
Mox20I TGGCCA 2 cut(s) 701, 927
MroXI GAANNNNTTC 1 cut(s) 737
MscI TGGCCA 2 cut(s) 701, 927
MslI CAYNNNNRTG 1 cut(s) 695
Msp20I TGGCCA 2 cut(s) 701, 927
MspI CCGG 3 cut(s) 165, 351, 615
MspR9I CCNGG 2 cut(s) 351, 615
MwoI GCNNNNNNNGC 8 cut(s) 33, 65, 74, 165, 305, 417, 442, 512
NciI CCSGG 2 cut(s) 351, 615
NdeII GATC 5 cut(s) 93, 659, 670, 952, 1020
NlaIII CATG 7 cut(s) 566, 687, 694, 700, 841, 1021, 1049
NlaIV GGNNCC 4 cut(s) 58, 169, 355, 661
NmuCI GTSAC 1 cut(s) 570
NspI RCATGY 1 cut(s) 566
PaeI GCATGC 1 cut(s) 566
PaeR7I CTCGAG 1 cut(s) 866
PagI TCATGA 2 cut(s) 1017, 1045
PaqCI CACCTGC 1 cut(s) 332
PcsI WCGNNNNNNNCGW 1 cut(s) 105
PdmI GAANNNNTTC 1 cut(s) 737
PfeI GAWTC 1 cut(s) 484
PkrI GCNGC 1 cut(s) 70
PleI GAGTC 1 cut(s) 877
PpsI GAGTC 1 cut(s) 877
Psp124BI GAGCTC 1 cut(s) 582
PspN4I GGNNCC 4 cut(s) 58, 169, 355, 661
PspPI GGNCC 1 cut(s) 167
PspXI VCTCGAGB 1 cut(s) 866
PstNI CAGNNNCTG 1 cut(s) 1041
PsuI RGATCY 1 cut(s) 659
RsaI GTAC 4 cut(s) 536, 621, 884, 916
RsaNI GTAC 4 cut(s) 535, 620, 883, 915
RseI CAYNNNNRTG 1 cut(s) 695
SacI GAGCTC 1 cut(s) 582
SalI GTCGAC 1 cut(s) 188
SatI GCNGC 1 cut(s) 69
Sau3AI GATC 5 cut(s) 93, 659, 670, 952, 1020
Sau96I GGNCC 1 cut(s) 167
SchI GAGTC 1 cut(s) 878
ScrFI CCNGG 2 cut(s) 351, 615
SduI GDGCHC 2 cut(s) 582, 615
SfaNI GCATC 1 cut(s) 509
Sfr274I CTCGAG 1 cut(s) 866
SlaI CTCGAG 1 cut(s) 866
SmiMI CAYNNNNRTG 1 cut(s) 695
SmlI CTYRAG 1 cut(s) 866
SmoI CTYRAG 1 cut(s) 866
SphI GCATGC 1 cut(s) 566
Sse9I AATT 2 cut(s) 180, 810
SsiI CCGC 1 cut(s) 71
SspMI CTAG 3 cut(s) 24, 567, 908
SstI GAGCTC 1 cut(s) 582
StyD4I CCNGG 2 cut(s) 349, 613
TaaI ACNGT 4 cut(s) 8, 17, 178, 737
TaiI ACGT 1 cut(s) 279
TaqI TCGA 6 cut(s) 108, 189, 636, 669, 867, 939
TasI AATT 2 cut(s) 180, 810
TatI WGTACW 1 cut(s) 534
TfiI GAWTC 1 cut(s) 484
TscAI CASTG 3 cut(s) 292, 609, 834
TseFI GTSAC 1 cut(s) 570
TseI GCWGC 1 cut(s) 68
Tsp45I GTSAC 1 cut(s) 570
TspDTI ATGAA 4 cut(s) 17, 120, 672, 976
TspGWI ACGGA 1 cut(s) 813
TspRI CASTG 3 cut(s) 292, 609, 834
XagI CCTNNNNNAGG 1 cut(s) 49
XceI RCATGY 1 cut(s) 566
XhoI CTCGAG 1 cut(s) 866
XmiI GTMKAC 1 cut(s) 189
XmnI GAANNNNTTC 1 cut(s) 737
XspI CTAG 3 cut(s) 24, 567, 908
ZraI GACGTC 1 cut(s) 277
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.